Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g006000.2.1
CDS Infomation

MAP kinase kinase kinase 80
Sequence

ATGCCTGCTTGGTGGGGGAAAAAATCCACCAAGAACAAAGACCTGCAAGCTAAAGAGAAA
GAAAGGGAGAAGTATGTAAAACCCAGAAGTTTTGATGAGTTACTTAGTAGAAATTCACCA
AGAACCAGTAAAGATTTTAGTGGTTCTGGTTCTGGGTTTTCTGGGTTTGATTCAGGTTCT
TCTTTGGAGAAAGCTCATCCTTTGCCTATGCCTTCTGTTTCTTCACTGGGAAATGATCAT
GGGGTTGTTTTAGGATGTGGGTCGGTTTCAGTTTCCAGTACTAGCTCATCTGGGTCATCT
GATGGCGGTGGTCCTGTAAATACTGATCAAGCTCAGTTGGATACTTTCAGAGGACTTGGA
GATAATAGGTTGAGCCCACTGTCACGAAGCCCAGTTCGTTCCAGAGGGACAACTACCACA
TCATCACCTTTACATCCTCGGTTTTCGAGTTTAAATCTGGACTCTTCAACGGGCAAGTTG
GATGATGTAAGGAGTGAATGTCATCAGCTGCCCCTTCCACCCGGTTCTCCACCCAGTCCT
TCTGCTTTGCCAAACCCAAGACCTTGTGTTGTGGCTGAAGGCGCAAACGTTAATATGTCA
AAATGGAAGAAAGGCAGGCTCCTAGGAAGAGGCACGTTTGGTCATGTGTATCTTGGATTC
AACAGGGAGAATGGACAAATGTGTGCGATAAAAGAAGTCAAGGTGGTTTCAGATGATCAA
ACATCCAAAGAGTGTCTTAAGCAACTGAATCAGGAAATCATTTTACTCAGTAACTTGACA
CATCCAAATATTGTTCGATATCATGGAAGTGAACTGGATGAAGAAACTCTATCAGTTTAC
TTGGAGTACGTTTCTGGGGGTTCTATACATAAACTGTTGCAGGAATATGGGCCTTTTAGG
GAGCCAGTTATACAAAACTACACAAGACAGATCCTTTCTGGCCTTTCCTTTTTACATGCT
AGGAATACAGTTCACAGGGATATAAAAGGAGCCAATATACTAGTAGATCCTAATGGTGAA
ATCAAGCTAGCTGATTTTGGCATGGCAAAGCATATAACTTCGTGCGCGTCAGTGCTCTCT
TTCAAAGGAAGTCCTTATTGGATGGCTCCTGAGGTGGTAATGAATACAAGCGGCTACGGC
CTTGCAGTGGATATTTGGAGTTTGGGATGTACAATTCTTGAAATGGCAACTTCAAAGCCA
CCTTGGAGCCAGTATGAAGGGGTTGCCGCCATATTTAAAATTGGAAACAGCAAAGACTTT
CCTGAAATTCCAGAACACCTTTCTAATGATGCAAAAAGCTTTATAAGGTCATGCTTGCAG
CGGGAGCCGTCCCTACGACCTACAGCTTCTAAACTACTAGAGCACCCTTTTGTTAAAAAC
CAAAGTACAGCAAAAGTTGCTCATGTCGGTGTAACCAAAGAATCATATCTTCGTTCCTTT
GATGGAAGCCGGACACCGCCAGTGTTGGAGCTCCATCCTGGTGGAAGAACTATTTCTCCG
GGAAGGAATATTTCCCCCGCTGAAGGAAACTATGCATCCCATCCGGTGATCACAGTCTCT
AGACCATTGATCTGCGCAAGGGAAAATGTAAAAGCCATAACATCTTTACCGGTATCCCCC
ACATCTAGCCCATTAAGACAGTATGAACCTGCCCGTAAAAGCTGTTATCTTTCTCCTCCT
CACTCATCTTATGGCATCGGGGGCCAGAGTGGATACGAGGCAAATGATTACTCAATGTTT
CAAACAAGGCCCAGCACAAGAATCACACTTGAGCCATGGCTCGAAATCCCTCACTTTAGA
ACTCAGACGCCATCTAGATCCCCCAAAACAAGACCCATTCTTTAG

Peptide Sequence

PEP ID

Solyc11g006000.2.1
PEP Infomation

MAP kinase kinase kinase 80
Sequence

MPAWWGKKSTKNKDLQAKEKEREKYVKPRSFDELLSRNSPRTSKDFSGSGSGFSGFDSGS
SLEKAHPLPMPSVSSLGNDHGVVLGCGSVSVSSTSSSGSSDGGGPVNTDQAQLDTFRGLG
DNRLSPLSRSPVRSRGTTTTSSPLHPRFSSLNLDSSTGKLDDVRSECHQLPLPPGSPPSP
SALPNPRPCVVAEGANVNMSKWKKGRLLGRGTFGHVYLGFNRENGQMCAIKEVKVVSDDQ
TSKECLKQLNQEIILLSNLTHPNIVRYHGSELDEETLSVYLEYVSGGSIHKLLQEYGPFR
EPVIQNYTRQILSGLSFLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHITSCASVLS
FKGSPYWMAPEVVMNTSGYGLAVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDF
PEIPEHLSNDAKSFIRSCLQREPSLRPTASKLLEHPFVKNQSTAKVAHVGVTKESYLRSF
DGSRTPPVLELHPGGRTISPGRNISPAEGNYASHPVITVSRPLICARENVKAITSLPVSP
TSSPLRQYEPARKSCYLSPPHSSYGIGGQSGYEANDYSMFQTRPSTRITLEPWLEIPHFR
TQTPSRSPKTRPIL*

Transcript Sequence

Transcript ID

Solyc11g006000.2.1
Transcript Infomation

MAP kinase kinase kinase 80
Sequence

ACATTATCAAAAACAAATTTGGTCATTAGAGATCAAATTCTTTACACTATCATATACTAA
ATATATATTATATTTCATATTATTCGAATGTTAAAATATATACCACAAATTGAGAACAAA
TAGTTAATTAATTCATAGCAATGTAAAATTTATAGGATTCTTACTTTTTTTTTCCATATT
ATATCACACTATTTAGTAGTATTTGTTTAAGCAAAATTTCATCTTTATCACTTGAAGTGT
TATCATCTTATGAACTTTTATTTTTTACATTGTTTGTGACAGTCACATTCAGTGTTTGTT
CTCGTAGGTGAATAAAATTCTATTCGCCGTCCTATATCATCTTTCGTATCATTTATTTTT
TTTTTTAAAAATAACTTTAATATAAATACGAGACACTTTATTTATCGAGACGAGATATAT
TTTTAGTATAAATTGACATATAGTATATAGATTAGGGGGTACAAAGCGCAAAACACGTAC
AACCAACTTGGCAGGCCCCTGTTTCCTTCTATCTATCTACCTTCCTATTTCCTTCTCAAA
GTTTTCTTCGTCAGCTACATCGATACATCCCCCTTCACCTAAAAGAAAAATAATAATCTT
GAAAATCCCAAATTAATTCTCTTTTTTCTGACTGTAGCAAACCAAGAATCTACAGATTTC
ACTCATTTTTGACTCACTTGTGGTGATCACTGAATTAGTTCAGAGGAAAAAAAAAATGCC
TGCTTGGTGGGGGAAAAAATCCACCAAGAACAAAGACCTGCAAGCTAAAGAGAAAGAAAG
GGAGAAGTATGTAAAACCCAGAAGTTTTGATGAGTTACTTAGTAGAAATTCACCAAGAAC
CAGTAAAGATTTTAGTGGTTCTGGTTCTGGGTTTTCTGGGTTTGATTCAGGTTCTTCTTT
GGAGAAAGCTCATCCTTTGCCTATGCCTTCTGTTTCTTCACTGGGAAATGATCATGGGGT
TGTTTTAGGATGTGGGTCGGTTTCAGTTTCCAGTACTAGCTCATCTGGGTCATCTGATGG
CGGTGGTCCTGTAAATACTGATCAAGCTCAGTTGGATACTTTCAGAGGACTTGGAGATAA
TAGGTTGAGCCCACTGTCACGAAGCCCAGTTCGTTCCAGAGGGACAACTACCACATCATC
ACCTTTACATCCTCGGTTTTCGAGTTTAAATCTGGACTCTTCAACGGGCAAGTTGGATGA
TGTAAGGAGTGAATGTCATCAGCTGCCCCTTCCACCCGGTTCTCCACCCAGTCCTTCTGC
TTTGCCAAACCCAAGACCTTGTGTTGTGGCTGAAGGCGCAAACGTTAATATGTCAAAATG
GAAGAAAGGCAGGCTCCTAGGAAGAGGCACGTTTGGTCATGTGTATCTTGGATTCAACAG
GGAGAATGGACAAATGTGTGCGATAAAAGAAGTCAAGGTGGTTTCAGATGATCAAACATC
CAAAGAGTGTCTTAAGCAACTGAATCAGGAAATCATTTTACTCAGTAACTTGACACATCC
AAATATTGTTCGATATCATGGAAGTGAACTGGATGAAGAAACTCTATCAGTTTACTTGGA
GTACGTTTCTGGGGGTTCTATACATAAACTGTTGCAGGAATATGGGCCTTTTAGGGAGCC
AGTTATACAAAACTACACAAGACAGATCCTTTCTGGCCTTTCCTTTTTACATGCTAGGAA
TACAGTTCACAGGGATATAAAAGGAGCCAATATACTAGTAGATCCTAATGGTGAAATCAA
GCTAGCTGATTTTGGCATGGCAAAGCATATAACTTCGTGCGCGTCAGTGCTCTCTTTCAA
AGGAAGTCCTTATTGGATGGCTCCTGAGGTGGTAATGAATACAAGCGGCTACGGCCTTGC
AGTGGATATTTGGAGTTTGGGATGTACAATTCTTGAAATGGCAACTTCAAAGCCACCTTG
GAGCCAGTATGAAGGGGTTGCCGCCATATTTAAAATTGGAAACAGCAAAGACTTTCCTGA
AATTCCAGAACACCTTTCTAATGATGCAAAAAGCTTTATAAGGTCATGCTTGCAGCGGGA
GCCGTCCCTACGACCTACAGCTTCTAAACTACTAGAGCACCCTTTTGTTAAAAACCAAAG
TACAGCAAAAGTTGCTCATGTCGGTGTAACCAAAGAATCATATCTTCGTTCCTTTGATGG
AAGCCGGACACCGCCAGTGTTGGAGCTCCATCCTGGTGGAAGAACTATTTCTCCGGGAAG
GAATATTTCCCCCGCTGAAGGAAACTATGCATCCCATCCGGTGATCACAGTCTCTAGACC
ATTGATCTGCGCAAGGGAAAATGTAAAAGCCATAACATCTTTACCGGTATCCCCCACATC
TAGCCCATTAAGACAGTATGAACCTGCCCGTAAAAGCTGTTATCTTTCTCCTCCTCACTC
ATCTTATGGCATCGGGGGCCAGAGTGGATACGAGGCAAATGATTACTCAATGTTTCAAAC
AAGGCCCAGCACAAGAATCACACTTGAGCCATGGCTCGAAATCCCTCACTTTAGAACTCA
GACGCCATCTAGATCCCCCAAAACAAGACCCATTCTTTAG