Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g005870.2.1
CDS Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT5G64600.1)
Sequence

ATGGGGAACAGAGGCCATACTCAGTACAGAACGACAAGGAGGACATCCAATTTCTCAATT
ACTCTCTACATTTTCCTCTTTTTTGTTTTGTCAATGTTCGTATTCTTTTATTACACTAAG
GATATCGTAGAAGATGAACAAAAGCTTGTCTTGGCATCGGAGAAGAAGGAAGAGCCTGAA
TTCGATGAGAATGAAGATAATTCTGTTTGGGAAGCTTCAAAGAGCCATGGTTTACATCCA
TGCATTAAGCCAACTGCAAAATACAAAGCTGCTCTAGGGTGGAAACGCTACTTGACTGTA
AAAAGTAATGGTGGATTAAATCAAATGAGGACGGGTATAGCTGACATGGTGGCAGTGGCA
CATGTGATGAATGCAACTTTGGTAATTCCTCAATTGGACAAGCGTTCATTCTGGCAAGAT
TCAAGTACATTTTCAGATATATTTGATGAGAACCATTTCATCAAAGCATTAAGAGGAGAC
CTCATGATTATTAAAGAGCTTCCTAAAGAAATAGAATCTTTACCTCGAGCTAGGAAGCAC
TTCACGTCATGGTCAGGAGTGGGTTACTATGAAGAAATGACTCAATTGTGGAAGGAGCAT
CAGGTCATTCATGTTGCTAAATCTGATTCTCGCCTTGCGAACAATGAACTGCCTCTTGAT
ATTCAGAGATTAAGATGCCGTGCTCTGTATAGTGCTCTCCGCTTCTCTCCTCCTATTGAG
AGACTTGGAAAGAAGCTCGTGGAGCAGCTGCGAACCAGAGCAAAAAGATATGTTGCACTC
CACTTGAGATATGAGAAGGACATGCTGTCTTTTACTGGTTGTACATATGGTCTTACTGAT
GCAGAAGCAGAGGAACTTCGGGTGATGAGAGAGAAGACAAATCATTGGAAGATTAAGGTT
ATCAACTCAACTGAACAGAGAATTGGTGGTTTCTGCCCTCTCACTCCAAAAGAGGTCGGA
TTATTTCTTCAAGCTCTTGGTTATCCTCCGTCAACATTTATATATATTGCTGCTGGAGAA
ATTTATGGTGGTAACACTCGTCTCTCAGAGCTCAAATCTTACTTTCCAAATGTTGTTTTC
AAGGAAATGCTGGCAACACCAGAACTGAGAGAGTTTGCAAATCATGCCTCACAAGCTGCA
GCACTCGATTATCTAATCTCTGTAGAGAGTGATGTTTTCATTCCATCACACTCAGGTAAT
ATGGCAAGAGCAGTTGAGGGGCACCGCAGATTCTTAGGCCACCGGAAAACAATCACTCCG
GACAGGAAAGGCCTAGTTGAAATATTTGATCAGCTGGAAGCTGGTCAGCTTGATGGATCA
TCATTTTCACATCTTGTCAGGCATTTGCATAAGAACAGGCAAGGTGCTCCAAGAAAGAGG
GCTGGAGCTCCCCCGGGAGTCAGAGGTCGAGCAAGGTCAAGACTGGAAGAGTCATTTTAC
CAAAATCCATATCCAGAGTGTATATGCAGTTCTAGAGAGTAA

Peptide Sequence

PEP ID

Solyc11g005870.2.1
PEP Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT5G64600.1)
Sequence

MGNRGHTQYRTTRRTSNFSITLYIFLFFVLSMFVFFYYTKDIVEDEQKLVLASEKKEEPE
FDENEDNSVWEASKSHGLHPCIKPTAKYKAALGWKRYLTVKSNGGLNQMRTGIADMVAVA
HVMNATLVIPQLDKRSFWQDSSTFSDIFDENHFIKALRGDLMIIKELPKEIESLPRARKH
FTSWSGVGYYEEMTQLWKEHQVIHVAKSDSRLANNELPLDIQRLRCRALYSALRFSPPIE
RLGKKLVEQLRTRAKRYVALHLRYEKDMLSFTGCTYGLTDAEAEELRVMREKTNHWKIKV
INSTEQRIGGFCPLTPKEVGLFLQALGYPPSTFIYIAAGEIYGGNTRLSELKSYFPNVVF
KEMLATPELREFANHASQAAALDYLISVESDVFIPSHSGNMARAVEGHRRFLGHRKTITP
DRKGLVEIFDQLEAGQLDGSSFSHLVRHLHKNRQGAPRKRAGAPPGVRGRARSRLEESFY
QNPYPECICSSRE*

Transcript Sequence

Transcript ID

Solyc11g005870.2.1
Transcript Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT5G64600.1)
Sequence

TTAACGTCAACGAGTACAAAATAAGGGCATAAGTGTCAATAACACAAAAATTAGAACTGA
GATGAACTATCTACAAATCTAGGGGACGTAAAATGCCATTTTCCAACTATGAATCTGTGT
TGTAACCCAAATCAAATCAACAAATTCTCCCAAAATTCGACTCTCTGAACTCTGAAGCAT
CGAAAATTGTGTAATTTTGTAGCCATTGATGAGTCGAGGAGTGTGAAATTTTGTATAAGA
AATGGGGAACAGAGGCCATACTCAGTACAGAACGACAAGGAGGACATCCAATTTCTCAAT
TACTCTCTACATTTTCCTCTTTTTTGTTTTGTCAATGTTCGTATTCTTTTATTACACTAA
GGATATCGTAGAAGATGAACAAAAGCTTGTCTTGGCATCGGAGAAGAAGGAAGAGCCTGA
ATTCGATGAGAATGAAGATAATTCTGTTTGGGAAGCTTCAAAGAGCCATGGTTTACATCC
ATGCATTAAGCCAACTGCAAAATACAAAGCTGCTCTAGGGTGGAAACGCTACTTGACTGT
AAAAAGTAATGGTGGATTAAATCAAATGAGGACGGGTATAGCTGACATGGTGGCAGTGGC
ACATGTGATGAATGCAACTTTGGTAATTCCTCAATTGGACAAGCGTTCATTCTGGCAAGA
TTCAAGTACATTTTCAGATATATTTGATGAGAACCATTTCATCAAAGCATTAAGAGGAGA
CCTCATGATTATTAAAGAGCTTCCTAAAGAAATAGAATCTTTACCTCGAGCTAGGAAGCA
CTTCACGTCATGGTCAGGAGTGGGTTACTATGAAGAAATGACTCAATTGTGGAAGGAGCA
TCAGGTCATTCATGTTGCTAAATCTGATTCTCGCCTTGCGAACAATGAACTGCCTCTTGA
TATTCAGAGATTAAGATGCCGTGCTCTGTATAGTGCTCTCCGCTTCTCTCCTCCTATTGA
GAGACTTGGAAAGAAGCTCGTGGAGCAGCTGCGAACCAGAGCAAAAAGATATGTTGCACT
CCACTTGAGATATGAGAAGGACATGCTGTCTTTTACTGGTTGTACATATGGTCTTACTGA
TGCAGAAGCAGAGGAACTTCGGGTGATGAGAGAGAAGACAAATCATTGGAAGATTAAGGT
TATCAACTCAACTGAACAGAGAATTGGTGGTTTCTGCCCTCTCACTCCAAAAGAGGTCGG
ATTATTTCTTCAAGCTCTTGGTTATCCTCCGTCAACATTTATATATATTGCTGCTGGAGA
AATTTATGGTGGTAACACTCGTCTCTCAGAGCTCAAATCTTACTTTCCAAATGTTGTTTT
CAAGGAAATGCTGGCAACACCAGAACTGAGAGAGTTTGCAAATCATGCCTCACAAGCTGC
AGCACTCGATTATCTAATCTCTGTAGAGAGTGATGTTTTCATTCCATCACACTCAGGTAA
TATGGCAAGAGCAGTTGAGGGGCACCGCAGATTCTTAGGCCACCGGAAAACAATCACTCC
GGACAGGAAAGGCCTAGTTGAAATATTTGATCAGCTGGAAGCTGGTCAGCTTGATGGATC
ATCATTTTCACATCTTGTCAGGCATTTGCATAAGAACAGGCAAGGTGCTCCAAGAAAGAG
GGCTGGAGCTCCCCCGGGAGTCAGAGGTCGAGCAAGGTCAAGACTGGAAGAGTCATTTTA
CCAAAATCCATATCCAGAGTGTATATGCAGTTCTAGAGAGTAAGAAAGTAAAAGGGGTGC
TTCTTGTCTGCTTCCAGCCAGCAGGTCTCTCTTGTTCTCAGTCATCTAAATGTCTGAAAT
CATATATTTTCTACCATCTTATTCGGCTTCAATTTCTCTGTTCTTAATTATTTGTTGGCC
AATTTAGCTAACTTTTGTTTTCTTACATTAGACTAGTGATTAAGTATCTCGGTACATATG
CATTATGACACTTCTATTGTCCGTCTTTCGCCCTCTTCCTCGGTCCCTCTTCCTCCAATT
CTTTTTTTCATTCTTTATCTTGTAAACAAATGATGTTATATTGGAATTAAGGAGCAAAAC
TGTTTGATGTCTTTGTAAATTGCTTGTGG