Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g005750.2.1
CDS Infomation

Pectinesterase (AHRD V3.3 *** K4D4I8_SOLLC)
Sequence

ATGATATCTCAATATTTTTCTCTAGTATTTTTATCTCTTTTCCTTTTCTTCTTCTCTAGT
TCGACGAAAAATTCAGCTACTCCCATTTCCTTCCCTCCGTCTCCGTCTCCGATTGAAATT
CAATTAGCTTGTAAAGCTTCACCGGACCCGCCAACATGTGAATCCGCATTAACGGAATCT
TCACACATTCCGTCAAATCTAACGGCGTTACAAATCATCCTCTCCGCGTTAAGCGTTTCA
TCTCACAACCTCACGAATGCTCAATCAATGGTGAAGAATCTCCTCGACTCCGCCGCCGCC
GGAGACGTCAACCTCACCGGCGCCGCGAAAAATTGTTTACAAGGACTGGGTAATTCGGTG
TACAGGTACAATCTGACGGCTGCTGCATTGCCACGTGGAGAAATCAAGGATGCTCGAGCA
TGGATGAGCGCCAGTTTGGGTTACCAAATCGGCTGCTCATCGAATTTACTGAGAGTAAAC
GGAACCCTACCGGTGGCGAAAACGTTAGAGGTGATAAAAGGTTTAATTGGATTTACTACA
AATGCGTTATGGATGATGGTGAATTATGATATCCACGGGAATAAAACCGGCTCGTGGGCC
CCACCTAAAACGGAGCGAAACGGGTTTTGGGAAGTTGTGTCAGGATCCGGATCCAGGTTT
AGAGGTGGGGTGCCCTCGGGGTTGAGCCCAAATGTGACGGTTTGCAAAGATGGTAGTTGT
AATTACAAGATGGTTCAAGAGGCAGTAAATGCAACCCCGGATAATTTGGGATCCGAGAAG
TTTGTTATACGGATTAAAACCGGGTTATATGATGAGATAATTCGAATACCCTTGGAGAAG
AGAAATGTGGTGTTTTTAGGTGACGGAATGGGTAAAACCGTCATTTCAGGATCGTTGAGT
GTGGGCCAAACACCTGGAATGTCCACTTATGAATCTGCCACAGTTGGAGTAACTGGTGAT
GGATTCATGGCTAGTGGTTTAACAATCCAAAACGCAGCTGGTATAGGTGCAGGACAAGCA
GTAGCTTTTCGGTCTGATAGCGACCATTCAGTAATTGAAAACTGTGAATTTCTTGGGAAT
CAAGACACACTCTACACACAATCATTACGACAGTACTATAAATCATGTCGAATTCAGGGG
AACGTAGATTTTATTTTTGGTAACGCGGCTGCAATTTTTCAGGACTGTGAAATCCTAGTC
ACTCCCCGGGTAGTTAACCCCGAAAAAGGTGAAACTAATGCAGTAACTGCTCATGGTAGA
TTAGACCCTGGACAATCAACAGGATTCGTATTTCAAAATTGTTCGATCAACGGAACGAAA
GAGTACATGATTTTGTATCGTAGTAATCCGAATGTGCATAAAAATTACCTCGGGAGGCCT
TGGAAGGAGTATTCAAGGACAGTTTTTTTGAATTGTAATTTAGAAGTTCTGATCCGCCCT
GAGGGCTGGATGCCATGGAGCGGCGAAGTTGCTCTCGCGACGCTCTATTATGGTGAATAT
AAAAGTAGTGGTAATGGAGGTAATGTAACAGGAAGAGTGCCATGGAGTAATCAAATTCCA
ACTGAACATGTTGAGTCTTACTCAGTTAAAAATTTTATTCAAGGGGATAAATGGATACCT
CCATCTTCTTATTAA

Peptide Sequence

PEP ID

Solyc11g005750.2.1
PEP Infomation

Pectinesterase (AHRD V3.3 *** K4D4I8_SOLLC)
Sequence

MISQYFSLVFLSLFLFFFSSSTKNSATPISFPPSPSPIEIQLACKASPDPPTCESALTES
SHIPSNLTALQIILSALSVSSHNLTNAQSMVKNLLDSAAAGDVNLTGAAKNCLQGLGNSV
YRYNLTAAALPRGEIKDARAWMSASLGYQIGCSSNLLRVNGTLPVAKTLEVIKGLIGFTT
NALWMMVNYDIHGNKTGSWAPPKTERNGFWEVVSGSGSRFRGGVPSGLSPNVTVCKDGSC
NYKMVQEAVNATPDNLGSEKFVIRIKTGLYDEIIRIPLEKRNVVFLGDGMGKTVISGSLS
VGQTPGMSTYESATVGVTGDGFMASGLTIQNAAGIGAGQAVAFRSDSDHSVIENCEFLGN
QDTLYTQSLRQYYKSCRIQGNVDFIFGNAAAIFQDCEILVTPRVVNPEKGETNAVTAHGR
LDPGQSTGFVFQNCSINGTKEYMILYRSNPNVHKNYLGRPWKEYSRTVFLNCNLEVLIRP
EGWMPWSGEVALATLYYGEYKSSGNGGNVTGRVPWSNQIPTEHVESYSVKNFIQGDKWIP
PSSY*

Transcript Sequence

Transcript ID

Solyc11g005750.2.1
Transcript Infomation

Pectinesterase (AHRD V3.3 *** K4D4I8_SOLLC)
Sequence

ATGATATCTCAATATTTTTCTCTAGTATTTTTATCTCTTTTCCTTTTCTTCTTCTCTAGT
TCGACGAAAAATTCAGCTACTCCCATTTCCTTCCCTCCGTCTCCGTCTCCGATTGAAATT
CAATTAGCTTGTAAAGCTTCACCGGACCCGCCAACATGTGAATCCGCATTAACGGAATCT
TCACACATTCCGTCAAATCTAACGGCGTTACAAATCATCCTCTCCGCGTTAAGCGTTTCA
TCTCACAACCTCACGAATGCTCAATCAATGGTGAAGAATCTCCTCGACTCCGCCGCCGCC
GGAGACGTCAACCTCACCGGCGCCGCGAAAAATTGTTTACAAGGACTGGGTAATTCGGTG
TACAGGTACAATCTGACGGCTGCTGCATTGCCACGTGGAGAAATCAAGGATGCTCGAGCA
TGGATGAGCGCCAGTTTGGGTTACCAAATCGGCTGCTCATCGAATTTACTGAGAGTAAAC
GGAACCCTACCGGTGGCGAAAACGTTAGAGGTGATAAAAGGTTTAATTGGATTTACTACA
AATGCGTTATGGATGATGGTGAATTATGATATCCACGGGAATAAAACCGGCTCGTGGGCC
CCACCTAAAACGGAGCGAAACGGGTTTTGGGAAGTTGTGTCAGGATCCGGATCCAGGTTT
AGAGGTGGGGTGCCCTCGGGGTTGAGCCCAAATGTGACGGTTTGCAAAGATGGTAGTTGT
AATTACAAGATGGTTCAAGAGGCAGTAAATGCAACCCCGGATAATTTGGGATCCGAGAAG
TTTGTTATACGGATTAAAACCGGGTTATATGATGAGATAATTCGAATACCCTTGGAGAAG
AGAAATGTGGTGTTTTTAGGTGACGGAATGGGTAAAACCGTCATTTCAGGATCGTTGAGT
GTGGGCCAAACACCTGGAATGTCCACTTATGAATCTGCCACAGTTGGAGTAACTGGTGAT
GGATTCATGGCTAGTGGTTTAACAATCCAAAACGCAGCTGGTATAGGTGCAGGACAAGCA
GTAGCTTTTCGGTCTGATAGCGACCATTCAGTAATTGAAAACTGTGAATTTCTTGGGAAT
CAAGACACACTCTACACACAATCATTACGACAGTACTATAAATCATGTCGAATTCAGGGG
AACGTAGATTTTATTTTTGGTAACGCGGCTGCAATTTTTCAGGACTGTGAAATCCTAGTC
ACTCCCCGGGTAGTTAACCCCGAAAAAGGTGAAACTAATGCAGTAACTGCTCATGGTAGA
TTAGACCCTGGACAATCAACAGGATTCGTATTTCAAAATTGTTCGATCAACGGAACGAAA
GAGTACATGATTTTGTATCGTAGTAATCCGAATGTGCATAAAAATTACCTCGGGAGGCCT
TGGAAGGAGTATTCAAGGACAGTTTTTTTGAATTGTAATTTAGAAGTTCTGATCCGCCCT
GAGGGCTGGATGCCATGGAGCGGCGAAGTTGCTCTCGCGACGCTCTATTATGGTGAATAT
AAAAGTAGTGGTAATGGAGGTAATGTAACAGGAAGAGTGCCATGGAGTAATCAAATTCCA
ACTGAACATGTTGAGTCTTACTCAGTTAAAAATTTTATTCAAGGGGATAAATGGATACCT
CCATCTTCTTATTAAGAGGCTCTTCTATAGGCTTTTACAAATTTAGTGAACTTTCTTTTA
CATAAATTTAGGGTCCATATGGACATGATTTCAAGTCTTAATTTGAAATTAGATTGCTTA