Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g005700.1.1
CDS Infomation

U-box domain-containing family protein (AHRD V3.3 *** B9HEI4_POPTR)
Sequence

ATGCGGAAGGATGATCTGTACGTAACGGTGCCGAGTTTTTTCCGGTGTCCGATATCACTC
GACGTGATGAAATCTCCGGTGAGTTTATGCACCGGAGTTACTTATGACCGGAGTAGCATC
CAGCGGTGGCTTGACAGCGGTAATAATACATGTCCGGCCACCATGCAAGTGCTACAAACT
AAGGACCTTGTACCTAACTATACACTACAACGACTCATCCAGATCTGGTCTGAGTCGGTC
CGGGCTCAGCGTTCCGATACGGAGTCTAACCGAGTTAACTCAGTTAGTCACGATCAAGTT
CGTGAGCTAATTAAACAGTTTGTAAACGAATTCCGAGTTCACTCTGAGTTGGAGGTGAAC
TCGGATCGGTTATCGAAGCTTTTAGGTTTCTCAGAAGAATCAGCTGAGAATCTTCGATTT
GTGGCTTCTGTAGCGGCGGAGAGTGATTTTCTCGCGATTCTCACTTCGTTCCTTGTTCAC
AACCCTAAAAATCTTAAAGTTGTGGAGAAAATTGTACCTCTATGGAAAATGCTGTTGGTT
GAACGAGGTTCCTTATCGAAAATCGGGAAAGCAAACGATATATATCCGGCGATAATATTT
GCTCTGAGAAATGGAAGTTCAAAGTTGAAAATGGAGATGTCAAAAGCTTTAGAGTTCATC
ACATCAACCGATTCCGAAGCTAAATCATCCTTATCAGAAAACTCCGATTTATACTCAGTT
TTATTGAGTTTTTCAACAATCAATACCGATTGGAATCCCGATTTAATGGAAGTCTCTGTT
TCCTGTTTAATTTCTCTCGCAATGCTTCGTAAAAACCGGGTGAAGCTTGTAAAAGCCGGC
GCGGTGAAATCAGTCGGAAAAGCATTGTCGACAACGGAGATGGGAACCGGATTAACAGAT
AAAGTATTGAGATTATTAGAACTGATATCTACTTGTAAAGAAGGAAGATTAGAACTGTGT
AACGACGGAGATTGTGTACAAGCGATAGTGAAGAAAGTATTGAAAGTATCAAACGAAGCA
ACGGAACATGCAGTAACGATTCTATGGAGTTTGTGTTGCCTTTTCCGGGATCACCGGGCA
CAGGAATCGGTAGCGAAGAGTAACGGTATGGCGAAGATATTGTTATTGTTACAAAGTAAT
TGCTCGCCGGCGGTGAGACAAATGGCCGCCGATTTACTGAAGGTTTTTAGAGTGAATTCC
AAAGCAGTTTCTTGTCTTTCTACTAGCTATGATACTAAAACTACTCACATCATGCCATTT
TGA

Peptide Sequence

PEP ID

Solyc11g005700.1.1
PEP Infomation

U-box domain-containing family protein (AHRD V3.3 *** B9HEI4_POPTR)
Sequence

MRKDDLYVTVPSFFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDSGNNTCPATMQVLQT
KDLVPNYTLQRLIQIWSESVRAQRSDTESNRVNSVSHDQVRELIKQFVNEFRVHSELEVN
SDRLSKLLGFSEESAENLRFVASVAAESDFLAILTSFLVHNPKNLKVVEKIVPLWKMLLV
ERGSLSKIGKANDIYPAIIFALRNGSSKLKMEMSKALEFITSTDSEAKSSLSENSDLYSV
LLSFSTINTDWNPDLMEVSVSCLISLAMLRKNRVKLVKAGAVKSVGKALSTTEMGTGLTD
KVLRLLELISTCKEGRLELCNDGDCVQAIVKKVLKVSNEATEHAVTILWSLCCLFRDHRA
QESVAKSNGMAKILLLLQSNCSPAVRQMAADLLKVFRVNSKAVSCLSTSYDTKTTHIMPF
*

Transcript Sequence

Transcript ID

Solyc11g005700.1.1
Transcript Infomation

U-box domain-containing family protein (AHRD V3.3 *** B9HEI4_POPTR)
Sequence

ATGCGGAAGGATGATCTGTACGTAACGGTGCCGAGTTTTTTCCGGTGTCCGATATCACTC
GACGTGATGAAATCTCCGGTGAGTTTATGCACCGGAGTTACTTATGACCGGAGTAGCATC
CAGCGGTGGCTTGACAGCGGTAATAATACATGTCCGGCCACCATGCAAGTGCTACAAACT
AAGGACCTTGTACCTAACTATACACTACAACGACTCATCCAGATCTGGTCTGAGTCGGTC
CGGGCTCAGCGTTCCGATACGGAGTCTAACCGAGTTAACTCAGTTAGTCACGATCAAGTT
CGTGAGCTAATTAAACAGTTTGTAAACGAATTCCGAGTTCACTCTGAGTTGGAGGTGAAC
TCGGATCGGTTATCGAAGCTTTTAGGTTTCTCAGAAGAATCAGCTGAGAATCTTCGATTT
GTGGCTTCTGTAGCGGCGGAGAGTGATTTTCTCGCGATTCTCACTTCGTTCCTTGTTCAC
AACCCTAAAAATCTTAAAGTTGTGGAGAAAATTGTACCTCTATGGAAAATGCTGTTGGTT
GAACGAGGTTCCTTATCGAAAATCGGGAAAGCAAACGATATATATCCGGCGATAATATTT
GCTCTGAGAAATGGAAGTTCAAAGTTGAAAATGGAGATGTCAAAAGCTTTAGAGTTCATC
ACATCAACCGATTCCGAAGCTAAATCATCCTTATCAGAAAACTCCGATTTATACTCAGTT
TTATTGAGTTTTTCAACAATCAATACCGATTGGAATCCCGATTTAATGGAAGTCTCTGTT
TCCTGTTTAATTTCTCTCGCAATGCTTCGTAAAAACCGGGTGAAGCTTGTAAAAGCCGGC
GCGGTGAAATCAGTCGGAAAAGCATTGTCGACAACGGAGATGGGAACCGGATTAACAGAT
AAAGTATTGAGATTATTAGAACTGATATCTACTTGTAAAGAAGGAAGATTAGAACTGTGT
AACGACGGAGATTGTGTACAAGCGATAGTGAAGAAAGTATTGAAAGTATCAAACGAAGCA
ACGGAACATGCAGTAACGATTCTATGGAGTTTGTGTTGCCTTTTCCGGGATCACCGGGCA
CAGGAATCGGTAGCGAAGAGTAACGGTATGGCGAAGATATTGTTATTGTTACAAAGTAAT
TGCTCGCCGGCGGTGAGACAAATGGCCGCCGATTTACTGAAGGTTTTTAGAGTGAATTCC
AAAGCAGTTTCTTGTCTTTCTACTAGCTATGATACTAAAACTACTCACATCATGCCATTT
TGA