Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g005610.1.1
CDS Infomation

LOW QUALITY:GRAS family transcription factor (AHRD V3.3 *** G7LD66_MEDTR)
Sequence

ATGGAGTGTGAAAATTTTCAACCAAATTACATTAATCCATATATTGAGTATAGCAACTTA
GAGACCACATTTTCTTGGAATAATCCTAGTATTATTAACCCTCAATGTTCAATCCAAGAT
TTTGTAACTATTGTTAATGATGTTGACATACTAGACTATTTCCCAAATGACTTCGATTTC
ATCGATGGAGATGTAGACATCCCCCTTCAAAACACGCAACAAAAAATTATTCAGGGAGAT
ACTGAACTCTCGAGAGAGGGTCAAAAATCACGTGTCTGCAATCCTCGTCTCAAATTCCTT
CAAGATCACCTCATGGAGGAAACAAGTGTAACTGATCTTCTTCTTATGGGAGCTGAGGCT
ATTGAAGCTAGAAATCTTGATCTTGCTTCTATAATTGTTTTGAGGCTAAATACAATACTT
CCTAATCAAGAAAACAGAGAAAATTCCCCTGTTGAAAGATTGGCTTTGTATTTTACACAA
GCCTTGTTATGCAAGACCTTGAATAATTCATCACATGAATTGTTGAATCTAAATCAATAT
CAATCAGAGTTCACATCTTCAATGACCGCGTTTCAAATGCTTCAAGAAATCTCTCCTTAT
GTTAAGTTTGCTCATTTCACCGCGAATCAAGCAATTCTTGAAGCAACAAAAGGGAGTCAA
CAAGTTCATATATTGGATTTTGACATCATTGAAGGCATTCAATGGCCTCCTTTGATGGTT
GATTTGGTTGAAAGAGGAAATACAAATTCTTCTCTAAGGATCACATCACTTGTTAGTGAT
CATTCAAACTCATGTCATGTAGAAAAAACAGGCCAAAGACTTCAAGAATTTGCTAATTCA
ATCAATCTTCCTTTCATGTTTGATCAAATCCTCTTAGAGGACTTAGAAAAGTTACAAGTT
GTTGTTGAGGGTCATAACAACTTAATAGCTAATGTTATGATCCACCAACTTCACATGCCA
CAAAGGGGAAGTTCACTAGTCAAGACATTTTTCAATGGACTAAGAAAATTGTCCCCTAAA
CTTGTTGTCTTAGTTGAAGAAGAGCTCTTCAATTTATCAAAAATCTCATCTATGCCATTT
GTTGAGTTCTTTTGTGAGGCTTTACATCATTACACAACAATATATGATTCAATTCTTGGA
GGTTTTGGTGGAGGATACAAGTTAGCATTAAGGGTCATTGAGAAGGAATTTTTAAGAGTT
AGAATTTTGGATTCATTAAGACAATTCCCTAGTGATAAATTAGAAAGGGAAAGATGGAGT
AAAGGGCTATATTCATTAAAAGGTTTTAGACAAATTCCAATGAGTTCAAGTAATGTGAGA
CAAGCCAAGCATTTGGTGAGTTTGTTTAGTGGAGGGTATTGGGTGCAAAATGAACAAAGC
AAATTGGCTTTGTGTTGGAAATCAAGGCCTTTGACAAGTGCTTCCATTTGGGTTCCTATA
TCATCAACTTCTAGTCCTTCAAGCTCAATATCTTTTTAA

Peptide Sequence

PEP ID

Solyc11g005610.1.1
PEP Infomation

LOW QUALITY:GRAS family transcription factor (AHRD V3.3 *** G7LD66_MEDTR)
Sequence

MECENFQPNYINPYIEYSNLETTFSWNNPSIINPQCSIQDFVTIVNDVDILDYFPNDFDF
IDGDVDIPLQNTQQKIIQGDTELSREGQKSRVCNPRLKFLQDHLMEETSVTDLLLMGAEA
IEARNLDLASIIVLRLNTILPNQENRENSPVERLALYFTQALLCKTLNNSSHELLNLNQY
QSEFTSSMTAFQMLQEISPYVKFAHFTANQAILEATKGSQQVHILDFDIIEGIQWPPLMV
DLVERGNTNSSLRITSLVSDHSNSCHVEKTGQRLQEFANSINLPFMFDQILLEDLEKLQV
VVEGHNNLIANVMIHQLHMPQRGSSLVKTFFNGLRKLSPKLVVLVEEELFNLSKISSMPF
VEFFCEALHHYTTIYDSILGGFGGGYKLALRVIEKEFLRVRILDSLRQFPSDKLERERWS
KGLYSLKGFRQIPMSSSNVRQAKHLVSLFSGGYWVQNEQSKLALCWKSRPLTSASIWVPI
SSTSSPSSSISF*

Transcript Sequence

Transcript ID

Solyc11g005610.1.1
Transcript Infomation

LOW QUALITY:GRAS family transcription factor (AHRD V3.3 *** G7LD66_MEDTR)
Sequence

ATGGAGTGTGAAAATTTTCAACCAAATTACATTAATCCATATATTGAGTATAGCAACTTA
GAGACCACATTTTCTTGGAATAATCCTAGTATTATTAACCCTCAATGTTCAATCCAAGAT
TTTGTAACTATTGTTAATGATGTTGACATACTAGACTATTTCCCAAATGACTTCGATTTC
ATCGATGGAGATGTAGACATCCCCCTTCAAAACACGCAACAAAAAATTATTCAGGGAGAT
ACTGAACTCTCGAGAGAGGGTCAAAAATCACGTGTCTGCAATCCTCGTCTCAAATTCCTT
CAAGATCACCTCATGGAGGAAACAAGTGTAACTGATCTTCTTCTTATGGGAGCTGAGGCT
ATTGAAGCTAGAAATCTTGATCTTGCTTCTATAATTGTTTTGAGGCTAAATACAATACTT
CCTAATCAAGAAAACAGAGAAAATTCCCCTGTTGAAAGATTGGCTTTGTATTTTACACAA
GCCTTGTTATGCAAGACCTTGAATAATTCATCACATGAATTGTTGAATCTAAATCAATAT
CAATCAGAGTTCACATCTTCAATGACCGCGTTTCAAATGCTTCAAGAAATCTCTCCTTAT
GTTAAGTTTGCTCATTTCACCGCGAATCAAGCAATTCTTGAAGCAACAAAAGGGAGTCAA
CAAGTTCATATATTGGATTTTGACATCATTGAAGGCATTCAATGGCCTCCTTTGATGGTT
GATTTGGTTGAAAGAGGAAATACAAATTCTTCTCTAAGGATCACATCACTTGTTAGTGAT
CATTCAAACTCATGTCATGTAGAAAAAACAGGCCAAAGACTTCAAGAATTTGCTAATTCA
ATCAATCTTCCTTTCATGTTTGATCAAATCCTCTTAGAGGACTTAGAAAAGTTACAAGTT
GTTGTTGAGGGTCATAACAACTTAATAGCTAATGTTATGATCCACCAACTTCACATGCCA
CAAAGGGGAAGTTCACTAGTCAAGACATTTTTCAATGGACTAAGAAAATTGTCCCCTAAA
CTTGTTGTCTTAGTTGAAGAAGAGCTCTTCAATTTATCAAAAATCTCATCTATGCCATTT
GTTGAGTTCTTTTGTGAGGCTTTACATCATTACACAACAATATATGATTCAATTCTTGGA
GGTTTTGGTGGAGGATACAAGTTAGCATTAAGGGTCATTGAGAAGGAATTTTTAAGAGTT
AGAATTTTGGATTCATTAAGACAATTCCCTAGTGATAAATTAGAAAGGGAAAGATGGAGT
AAAGGGCTATATTCATTAAAAGGTTTTAGACAAATTCCAATGAGTTCAAGTAATGTGAGA
CAAGCCAAGCATTTGGTGAGTTTGTTTAGTGGAGGGTATTGGGTGCAAAATGAACAAAGC
AAATTGGCTTTGTGTTGGAAATCAAGGCCTTTGACAAGTGCTTCCATTTGGGTTCCTATA
TCATCAACTTCTAGTCCTTCAAGCTCAATATCTTTTTAA