Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g005380.2.1
CDS Infomation

Trihelix transcription factor GT-2 (AHRD V3.3 *** W9RGP4_9ROSA)
Sequence

ATGCTAGAAAGTTCTGTTTTGTTGGAGAATACAGCTGCTGGTGGCGCCGTCACCGGCGCC
GATGGTGAAGCGTCGGAGCTGAAGAATGAAGGTGGTGGTGGTGGTGGAAGTGTCGGTGGA
GGTTCAGAGGAAGAAGATAAGAATTTTTCAGGTGGAAATCGTTGGCCACATGAAGAAACT
TTGGCTTTACTCAAAATAAGATCGGAAATGGATGTTGCATTTCGTGATTCCAATCTCAAA
AGCCCTCTCTGGGATGAAATTTCTAGGAAGATGGCTGAGCTTGGGTATAATCGAAATGCG
AAGAAATGCAGGGAGAAGTTTGAGAACATTTATAAGTATCATAAGAGAACTAAAGATGGT
AGATCTGGTAGACAAACTGGGAAAAACTATCGATTTTTCGAGCAATTAGAGCTTTTAGAT
AGCCAATCCTTGTTTTCATCGCCTCCATTAAACCATAGCCAAATCAATAGAATGGAAACA
ATGCCTGTACCAATGCCTATGCCAATGACAATGATAAAACCAGCTGCTAGTGGATGTCAG
GATTTTGGAATGGATCATAGTCGAGTTCGGGGTTTTAATCCGGGGTTCATGTCCACATCC
ACGTCCACGACCTCGTCCTCGGGGAAAGAATCCGATGGTAGTGTGAAGAAGAAAAGGAAA
TTGGCTAGTTATTTTGAGAGGTTGATGAAGGAAGTGTTGGATAAGCAAGAGGACTTGCAA
AACAAGTTTCTAGAAGCAATGGAAAAATGTGAGAAGGATCGAATAGCGAGGGACGAGGCT
TGGAAGATGCAGGAAATCGCGAGATTAAAGAAAGAACAAGAAGCATTAGCTCACGAAAGA
GCAATTTCTGCCGCGAAAGACGCAGCAGTGATTGCTTTCTTGCAGAAAGTCTCAGATCAA
ACCATTCAACTACAGTTACCAACAGATTTACCCCATAGGCATACCGAGGAACGAGAGAGT
GAATCAATGAAAACTATTGGAAATCAGGAGAATGTTGTTATGCAACAAGACAACGACAAG
GAAAACATTGACAAACAAGAGATTGATAGTGCTGGTGAGAATTCAAACTCGTTTCAAACG
AATTCATCTTCTCGATGGCCTAAAGCCGAAGTGGAAGCCTTAATCAAGCTAAGAACAAAC
GTCGACTTGCAATACCAAGACAACGGCTCATCAAAAGGGCCTCTTTGGGAAGACATCTCA
TGTGGTATGAAGAAGCTTGGATACGATAGAAACGCGAAGAGATGTAAAGAGAAATGGGAG
AACATAAACAAGTACTATAGAAGAGTTAAAGAAAGCCAAAAGAAAAGGCCAGAAGATTCA
AAAACATGTCCATATTTTCATCAATTGGATTCCATCTATCAAAACAAGTCCAAGAAACAA
TTGCCCATTATGGAAACTCCGGGTTCGAATATGAAGGCCGGAGAGATACTAATGCAAATA
ATCAACCAACAACAGCAACAACAAGCATTAGAAAGAACAGAATGTTGA

Peptide Sequence

PEP ID

Solyc11g005380.2.1
PEP Infomation

Trihelix transcription factor GT-2 (AHRD V3.3 *** W9RGP4_9ROSA)
Sequence

MLESSVLLENTAAGGAVTGADGEASELKNEGGGGGGSVGGGSEEEDKNFSGGNRWPHEET
LALLKIRSEMDVAFRDSNLKSPLWDEISRKMAELGYNRNAKKCREKFENIYKYHKRTKDG
RSGRQTGKNYRFFEQLELLDSQSLFSSPPLNHSQINRMETMPVPMPMPMTMIKPAASGCQ
DFGMDHSRVRGFNPGFMSTSTSTTSSSGKESDGSVKKKRKLASYFERLMKEVLDKQEDLQ
NKFLEAMEKCEKDRIARDEAWKMQEIARLKKEQEALAHERAISAAKDAAVIAFLQKVSDQ
TIQLQLPTDLPHRHTEERESESMKTIGNQENVVMQQDNDKENIDKQEIDSAGENSNSFQT
NSSSRWPKAEVEALIKLRTNVDLQYQDNGSSKGPLWEDISCGMKKLGYDRNAKRCKEKWE
NINKYYRRVKESQKKRPEDSKTCPYFHQLDSIYQNKSKKQLPIMETPGSNMKAGEILMQI
INQQQQQQALERTEC*

Transcript Sequence

Transcript ID

Solyc11g005380.2.1
Transcript Infomation

Trihelix transcription factor GT-2 (AHRD V3.3 *** W9RGP4_9ROSA)
Sequence

CACATGTTTTCACCAATTTGACAACTTGTAAAATTTATTTATTAACATGTCCCACTTCAA
TTCAATTCTTTCAAATCCCTTTGCCTATTTAAAAAGTGGTTGGAAAATAATAAATTTTAA
TTCACTTCCCCATTCAATATTTCTTGACCCCCTTAAATAAAAATAAAATAAAATAGTTGG
GGGTTGAATTTAAAAATATCCAATTTTTTCGAAGAGAAAAAAAAAGGATAATAAGTGCCT
TCTACTCAATTATTTTTACTACTAATAAAGTCCAAAAGAAATTTTCTTTGTAAGAAGAAA
AAAAAATGCTAGAAAGTTCTGTTTTGTTGGAGAATACAGCTGCTGGTGGCGCCGTCACCG
GCGCCGATGGTGAAGCGTCGGAGCTGAAGAATGAAGGTGGTGGTGGTGGTGGAAGTGTCG
GTGGAGGTTCAGAGGAAGAAGATAAGAATTTTTCAGGTGGAAATCGTTGGCCACATGAAG
AAACTTTGGCTTTACTCAAAATAAGATCGGAAATGGATGTTGCATTTCGTGATTCCAATC
TCAAAAGCCCTCTCTGGGATGAAATTTCTAGGAAGATGGCTGAGCTTGGGTATAATCGAA
ATGCGAAGAAATGCAGGGAGAAGTTTGAGAACATTTATAAGTATCATAAGAGAACTAAAG
ATGGTAGATCTGGTAGACAAACTGGGAAAAACTATCGATTTTTCGAGCAATTAGAGCTTT
TAGATAGCCAATCCTTGTTTTCATCGCCTCCATTAAACCATAGCCAAATCAATAGAATGG
AAACAATGCCTGTACCAATGCCTATGCCAATGACAATGATAAAACCAGCTGCTAGTGGAT
GTCAGGATTTTGGAATGGATCATAGTCGAGTTCGGGGTTTTAATCCGGGGTTCATGTCCA
CATCCACGTCCACGACCTCGTCCTCGGGGAAAGAATCCGATGGTAGTGTGAAGAAGAAAA
GGAAATTGGCTAGTTATTTTGAGAGGTTGATGAAGGAAGTGTTGGATAAGCAAGAGGACT
TGCAAAACAAGTTTCTAGAAGCAATGGAAAAATGTGAGAAGGATCGAATAGCGAGGGACG
AGGCTTGGAAGATGCAGGAAATCGCGAGATTAAAGAAAGAACAAGAAGCATTAGCTCACG
AAAGAGCAATTTCTGCCGCGAAAGACGCAGCAGTGATTGCTTTCTTGCAGAAAGTCTCAG
ATCAAACCATTCAACTACAGTTACCAACAGATTTACCCCATAGGCATACCGAGGAACGAG
AGAGTGAATCAATGAAAACTATTGGAAATCAGGAGAATGTTGTTATGCAACAAGACAACG
ACAAGGAAAACATTGACAAACAAGAGATTGATAGTGCTGGTGAGAATTCAAACTCGTTTC
AAACGAATTCATCTTCTCGATGGCCTAAAGCCGAAGTGGAAGCCTTAATCAAGCTAAGAA
CAAACGTCGACTTGCAATACCAAGACAACGGCTCATCAAAAGGGCCTCTTTGGGAAGACA
TCTCATGTGGTATGAAGAAGCTTGGATACGATAGAAACGCGAAGAGATGTAAAGAGAAAT
GGGAGAACATAAACAAGTACTATAGAAGAGTTAAAGAAAGCCAAAAGAAAAGGCCAGAAG
ATTCAAAAACATGTCCATATTTTCATCAATTGGATTCCATCTATCAAAACAAGTCCAAGA
AACAATTGCCCATTATGGAAACTCCGGGTTCGAATATGAAGGCCGGAGAGATACTAATGC
AAATAATCAACCAACAACAGCAACAACAAGCATTAGAAAGAACAGAATGTTGAACAAAAG
TTTGTTCAAGAACAAAGTAATGCAAATAATAGATTGATGGACAAGAAGGTTTTTCTATTT
TACTTTGTGGTTAGTGTACCATTTTTGACAAGTGGGACAAAATCAATTATGTGCTTTGGA
AATGTGGGATTATGTGTGAGGGAGGAACTTTTTCATTCACAAAGTTAGTTTTACTATAAA
TGCACACACAAAGAAAGTGGCATATTTTCTTTTTTTCTAGTTAGGTATATTTAATCATTT
GTTGTTAGTAGTTAAATAGTGTCATAGGGAATAGTTTTAGCTTTGGTGTGATTTTGATAT
TTCTTTTTTTGAAGATTATATATGTAGCATATAGTATACATTTTCTTCTTTTGAGGCTTT
GGTTTCTCAACCATATCCTCCATAAGTACATGTGTGTAATAGTTCAAAATAGTTGATTGT
GTTTGTATGAATTTAGAATATACTTTTACATGTTTGTCGATTTTTATTTTTTGTTGTTGA
AGGGATTTATGAGTAAGAGTGAAAAAGTTGTGTACTTTAACTAGAATAATTTTCACAAAA
GGGTCTTTGTTACTGTTTCGAGAGAAATATTGAAAACAC