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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g005310.1.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1)
Sequence

ATGTCAACTATAACTTCCAGTCTATTAATTCAAGAATTCATGGAGAACTTCCACTACTCA
AGAAGACTACTCCGGGAAGCCACCATGGCGCCGCCTCCGGCAGCCGGAATCAGCCACGAT
ACAACTAACGATCCACCGCCACTTGGTCACAAAGTCAACACGTTTGATGAAAATGTTATT
ATGGTCTTGGCTGTACTTGTATGTGCCATAATTTGTTCACTTGTCTTGAATTTCATCATA
AAATGTGCATTTAATTGCTCTACCCTAATATTAACAAATTCATCCTCATCAAACCATACA
AATAACAACCCTTCTTCAACAAAATTAGCCAATAGAGGGATCGCGAAAAGAGCTCTCAAG
ACATTTCCAATTATAACATATAGTACTACTGAATTGAAACATCCAAGACTCGATTCTGAA
TGTGTCATTTGCTTATCGGAGTTTGGAGTTGGAGACAAAATCAAAGTGCTACCTAAGTGC
AACCATGGATTCCATGTCCGATGTATCGATAAATGGCTCAATTCACACTCTTCTTGCCCT
ACTTGTAGACATTGCCTTATTGAGACATGCCATCCAATACAACAAGTTATAATAAGGATT
GAAACTCTCCAACGTGAAGATGTTGTATCTAATAATCAACATTAG

Peptide Sequence

PEP ID

Solyc11g005310.1.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1)
Sequence

MSTITSSLLIQEFMENFHYSRRLLREATMAPPPAAGISHDTTNDPPPLGHKVNTFDENVI
MVLAVLVCAIICSLVLNFIIKCAFNCSTLILTNSSSSNHTNNNPSSTKLANRGIAKRALK
TFPIITYSTTELKHPRLDSECVICLSEFGVGDKIKVLPKCNHGFHVRCIDKWLNSHSSCP
TCRHCLIETCHPIQQVIIRIETLQREDVVSNNQH*

Transcript Sequence

Transcript ID

Solyc11g005310.1.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1)
Sequence

ATGTCAACTATAACTTCCAGTCTATTAATTCAAGAATTCATGGAGAACTTCCACTACTCA
AGAAGACTACTCCGGGAAGCCACCATGGCGCCGCCTCCGGCAGCCGGAATCAGCCACGAT
ACAACTAACGATCCACCGCCACTTGGTCACAAAGTCAACACGTTTGATGAAAATGTTATT
ATGGTCTTGGCTGTACTTGTATGTGCCATAATTTGTTCACTTGTCTTGAATTTCATCATA
AAATGTGCATTTAATTGCTCTACCCTAATATTAACAAATTCATCCTCATCAAACCATACA
AATAACAACCCTTCTTCAACAAAATTAGCCAATAGAGGGATCGCGAAAAGAGCTCTCAAG
ACATTTCCAATTATAACATATAGTACTACTGAATTGAAACATCCAAGACTCGATTCTGAA
TGTGTCATTTGCTTATCGGAGTTTGGAGTTGGAGACAAAATCAAAGTGCTACCTAAGTGC
AACCATGGATTCCATGTCCGATGTATCGATAAATGGCTCAATTCACACTCTTCTTGCCCT
ACTTGTAGACATTGCCTTATTGAGACATGCCATCCAATACAACAAGTTATAATAAGGATT
GAAACTCTCCAACGTGAAGATGTTGTATCTAATAATCAACATTAG