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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g005290.1.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1)
Sequence

ATGGAGAACTTCCACCACTCAAGAAGATTACTCTGGGAGGTGGCCGCCGTGGTGCCGCCT
CCTATGCCAGCCGGAATAACTAGCCCCGAGACAATTGATGATCTACAAATTGGAAAAAAT
GTCAACACATTTGATGCAAATGTTATTATGGTGTTAGCAGTATTTGTAAGTGCCATAATT
TGTTCACTTGTGTTGAACTCCATCATAAAATGTTTCTTTAGGTGCTCTACCCTAGTTTTA
ATAGACTCATACTCAAACCATACAAATCCTTCATCAACCAATAAAGGGATCAAGAAAAAA
GCCCTCAAGACATTTCCAATTGTAAGATACACTACTGAATTGAAACATCCAGGGCTCGAC
TCTGAATGTGTCATTTGCTTATCTGAATTCATTGTTGGAGATAAAGTTAAGGTTCTACCA
AAGTGTAACCATGGATTCCACGTCAAGTGTATCGATAAATGGCTCAATTCACATTCTTCT
TGTCCTACTTGTAGGCATTGCCTCATTGAAACTTGTCAAAAAATTGTCAACGGTGACAAT
TTTGTTACTACAAATGCAATTTCATCATCAACAGTTGAAGAAATTGTAACAAGGATTGAA
CCTCTAGAACGTGAAGGTGTTATATCTAATTAA

Peptide Sequence

PEP ID

Solyc11g005290.1.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1)
Sequence

MENFHHSRRLLWEVAAVVPPPMPAGITSPETIDDLQIGKNVNTFDANVIMVLAVFVSAII
CSLVLNSIIKCFFRCSTLVLIDSYSNHTNPSSTNKGIKKKALKTFPIVRYTTELKHPGLD
SECVICLSEFIVGDKVKVLPKCNHGFHVKCIDKWLNSHSSCPTCRHCLIETCQKIVNGDN
FVTTNAISSSTVEEIVTRIEPLEREGVISN*

Transcript Sequence

Transcript ID

Solyc11g005290.1.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1)
Sequence

ATGGAGAACTTCCACCACTCAAGAAGATTACTCTGGGAGGTGGCCGCCGTGGTGCCGCCT
CCTATGCCAGCCGGAATAACTAGCCCCGAGACAATTGATGATCTACAAATTGGAAAAAAT
GTCAACACATTTGATGCAAATGTTATTATGGTGTTAGCAGTATTTGTAAGTGCCATAATT
TGTTCACTTGTGTTGAACTCCATCATAAAATGTTTCTTTAGGTGCTCTACCCTAGTTTTA
ATAGACTCATACTCAAACCATACAAATCCTTCATCAACCAATAAAGGGATCAAGAAAAAA
GCCCTCAAGACATTTCCAATTGTAAGATACACTACTGAATTGAAACATCCAGGGCTCGAC
TCTGAATGTGTCATTTGCTTATCTGAATTCATTGTTGGAGATAAAGTTAAGGTTCTACCA
AAGTGTAACCATGGATTCCACGTCAAGTGTATCGATAAATGGCTCAATTCACATTCTTCT
TGTCCTACTTGTAGGCATTGCCTCATTGAAACTTGTCAAAAAATTGTCAACGGTGACAAT
TTTGTTACTACAAATGCAATTTCATCATCAACAGTTGAAGAAATTGTAACAAGGATTGAA
CCTCTAGAACGTGAAGGTGTTATATCTAATTAA