Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g005140.1.1
CDS Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RM09_RICCO)
Sequence	ATGTGGAGATCAGCGGTTCTGAGTAGTGTTGTAGCAAAGAAAAGCTTTTGTGGTCTCCAA AACCGAGCCTTTACTGCTTTTCTTCATCAAGTATCCAGAGATCAAACTTTAGCTCCAGTG AGTACATTTGAATCTTCATTTCGTTATTATTCTCATTGTGTTTCTTCCAAATCTTATTTA TGTGAAACAACAAGATTTTTCTCATCGAACCAATCTGAACAATCCGAATCTCTAGGTTCT CACCCCTTTGAAAATGATAAAGACTCTGTTTTTGGAGTTGTTGTTGAAGGGTCCTCTGTT CTTAATGATGATACCCTTGCAGTTGAAAATGGGTCTGATTTAGGAAATACTGAGGTTGTA GTGGAAGATGAGGATTTAGATTTGGAGAAATTGGAGACTTTGTTGTCTTTATTGCAGAGT AGTGGTATTATTGACGGATCTATTGAGTCTAGTCTTGAGGAAATTGAGTTGTCTTTGAAT GAGGAGTTGGTTGTTAGAGTGCTTGAGACGCCTTATGTTCCTGGGGAGAATTTGATTTCG TTTTTCAAGTGGGTTTTGAAGAAACCCGAGTTTGTCGTGACGAGTAAGGCAGTTGAATTG TTGGTTACTGCAATCTGCATTCAAGGTAGGAATATCTATGCTTTATGGGATTTGGTGAAG GAGATTGGAGAAAAGAACAAGGGAATATTGAGTGATGAGATTCTTAATGAATTGATTGCT TTATTGTCGAGATTAGGTAAAGGAAAGGCTGCATTTGAGATCTTCAATAAGTTTGGGGAT TTAGGATGTGCACCAAATGCTGATACATACTATTTTACCATTGAAGCACTTTCTAGGCGA TCGATTTATGATTGGGCTTCTACTGTTTGTGAGAAGATGCTTAATGCTGATAAGTTGCCT GGTGCTGAGAAAGTTGGAAAGATTGTTTCTTTTCTGTGTAAAGGAAATAAGTGTAGAGAT GCACATCTGGTTTATTTGTCGGCAAAGGAGAAAAATATTAATCTGCCTGTATCTTCTATT AAGTTGTTGATCAGCTCTCTTTGTCGCAAAGATGAAGGCGTTAAACTTGCAATGGAGGTG TTGGATGAGTTCCCCAAAGAAGAGCGGAAGCATGCCATTAAGTCATTCTCACATGTCATC AATGGGCTGTGTAGGGCAAATGATGTAACAGGGGAAAAGCAGCTGCGTTCCTATTGCAGT GAAGACATTGACGAGGCCAAAAACTTGCTCTTAAAAATGATAGATGCAGGTCCACCACCT GGCAATGCAGTCTTTAATACAGTTATTAATGCGCTCTCCAAGAAGGGAGAAATGGGAGAA GCTAGGAAACTATTGAAGGTGATGGAGGGTAGAGGTTTGAAACCTGATGTGTACACTTAT AGTGTAATCATGAGTGGTTATACAAAGGGAGGTGAGATGGAGGAGGCCTGCAAGATTTTG AATGAAGCCAAAAAGAAGCACTCCTGTCTAAGTCCCGTCACTTTTCACACAATTATTCGG GGCTATTTCAAGCTCGAACAGTATGACAAGGCTCTGGAACTATTGGGAGATATGAAGGAG TATGGAGTTCAGCCTAATGCGGATGAATATAACAAATTTATTCAATCTCTATGCCTTAAG GCTTTAGATTGGACAACAGCAGAGAAACTGCTTGAGGAGATGAAGGAGAATGGGGTGCAT CTAAATGCAATCACAAAGGGTCTCATAAGAGCAGTTAAGGAGTTAGAACAGGAAGAAGTA GGAACAAATGAAATAACGGCTACAGCATAG

Peptide Sequence

PEP ID	Solyc11g005140.1.1
PEP Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RM09_RICCO)
Sequence	MWRSAVLSSVVAKKSFCGLQNRAFTAFLHQVSRDQTLAPVSTFESSFRYYSHCVSSKSYL CETTRFFSSNQSEQSESLGSHPFENDKDSVFGVVVEGSSVLNDDTLAVENGSDLGNTEVV VEDEDLDLEKLETLLSLLQSSGIIDGSIESSLEEIELSLNEELVVRVLETPYVPGENLIS FFKWVLKKPEFVVTSKAVELLVTAICIQGRNIYALWDLVKEIGEKNKGILSDEILNELIA LLSRLGKGKAAFEIFNKFGDLGCAPNADTYYFTIEALSRRSIYDWASTVCEKMLNADKLP GAEKVGKIVSFLCKGNKCRDAHLVYLSAKEKNINLPVSSIKLLISSLCRKDEGVKLAMEV LDEFPKEERKHAIKSFSHVINGLCRANDVTGEKQLRSYCSEDIDEAKNLLLKMIDAGPPP GNAVFNTVINALSKKGEMGEARKLLKVMEGRGLKPDVYTYSVIMSGYTKGGEMEEACKIL NEAKKKHSCLSPVTFHTIIRGYFKLEQYDKALELLGDMKEYGVQPNADEYNKFIQSLCLK ALDWTTAEKLLEEMKENGVHLNAITKGLIRAVKELEQEEVGTNEITATA*

Transcript Sequence

Transcript ID	Solyc11g005140.1.1
Transcript Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RM09_RICCO)
Sequence	ATGTGGAGATCAGCGGTTCTGAGTAGTGTTGTAGCAAAGAAAAGCTTTTGTGGTCTCCAA AACCGAGCCTTTACTGCTTTTCTTCATCAAGTATCCAGAGATCAAACTTTAGCTCCAGTG AGTACATTTGAATCTTCATTTCGTTATTATTCTCATTGTGTTTCTTCCAAATCTTATTTA TGTGAAACAACAAGATTTTTCTCATCGAACCAATCTGAACAATCCGAATCTCTAGGTTCT CACCCCTTTGAAAATGATAAAGACTCTGTTTTTGGAGTTGTTGTTGAAGGGTCCTCTGTT CTTAATGATGATACCCTTGCAGTTGAAAATGGGTCTGATTTAGGAAATACTGAGGTTGTA GTGGAAGATGAGGATTTAGATTTGGAGAAATTGGAGACTTTGTTGTCTTTATTGCAGAGT AGTGGTATTATTGACGGATCTATTGAGTCTAGTCTTGAGGAAATTGAGTTGTCTTTGAAT GAGGAGTTGGTTGTTAGAGTGCTTGAGACGCCTTATGTTCCTGGGGAGAATTTGATTTCG TTTTTCAAGTGGGTTTTGAAGAAACCCGAGTTTGTCGTGACGAGTAAGGCAGTTGAATTG TTGGTTACTGCAATCTGCATTCAAGGTAGGAATATCTATGCTTTATGGGATTTGGTGAAG GAGATTGGAGAAAAGAACAAGGGAATATTGAGTGATGAGATTCTTAATGAATTGATTGCT TTATTGTCGAGATTAGGTAAAGGAAAGGCTGCATTTGAGATCTTCAATAAGTTTGGGGAT TTAGGATGTGCACCAAATGCTGATACATACTATTTTACCATTGAAGCACTTTCTAGGCGA TCGATTTATGATTGGGCTTCTACTGTTTGTGAGAAGATGCTTAATGCTGATAAGTTGCCT GGTGCTGAGAAAGTTGGAAAGATTGTTTCTTTTCTGTGTAAAGGAAATAAGTGTAGAGAT GCACATCTGGTTTATTTGTCGGCAAAGGAGAAAAATATTAATCTGCCTGTATCTTCTATT AAGTTGTTGATCAGCTCTCTTTGTCGCAAAGATGAAGGCGTTAAACTTGCAATGGAGGTG TTGGATGAGTTCCCCAAAGAAGAGCGGAAGCATGCCATTAAGTCATTCTCACATGTCATC AATGGGCTGTGTAGGGCAAATGATGTAACAGGGGAAAAGCAGCTGCGTTCCTATTGCAGT GAAGACATTGACGAGGCCAAAAACTTGCTCTTAAAAATGATAGATGCAGGTCCACCACCT GGCAATGCAGTCTTTAATACAGTTATTAATGCGCTCTCCAAGAAGGGAGAAATGGGAGAA GCTAGGAAACTATTGAAGGTGATGGAGGGTAGAGGTTTGAAACCTGATGTGTACACTTAT AGTGTAATCATGAGTGGTTATACAAAGGGAGGTGAGATGGAGGAGGCCTGCAAGATTTTG AATGAAGCCAAAAAGAAGCACTCCTGTCTAAGTCCCGTCACTTTTCACACAATTATTCGG GGCTATTTCAAGCTCGAACAGTATGACAAGGCTCTGGAACTATTGGGAGATATGAAGGAG TATGGAGTTCAGCCTAATGCGGATGAATATAACAAATTTATTCAATCTCTATGCCTTAAG GCTTTAGATTGGACAACAGCAGAGAAACTGCTTGAGGAGATGAAGGAGAATGGGGTGCAT CTAAATGCAATCACAAAGGGTCTCATAAGAGCAGTTAAGGAGTTAGAACAGGAAGAAGTA GGAACAAATGAAATAACGGCTACAGCATAG