Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g086660.2.1
CDS Infomation	Rop guanine nucleotide exchange factor, putative (AHRD V3.3 *** B9T764_RICCO)
Sequence	ATGGATAGACTTGAGTCACACAAGGACAAAAGGAGAGAATTTCAGCCACAGCTCAAGCAT TTTATTCAACTAGACCCTTGTGTAAGTTCCAAGAAAGAGAACCATTTTTCTGTATTGAAG TTTAAGGTTTCAAAATCCATCAAGAATTTGTATCAAAAAGCTAAAGTGTCAAAGAGGTTT GGAAGTAAAAGGTTTGATTTTGATGGCATTGTGATGACTAACTCTGTTTATTCTGCTTCT TCTCTTGATGATAAAATGGAGGTTTTGTCTGATAAGAGTGATGGGGCAGAAAGGGTAATG GAGGGTTATGGGGAGTCTTTGGATGAGAAAATTGGAATAGGCAGTAGTTCAAGTTCTGTT CTTTTAGCGTCAGAGGAAAATGTGAATGAAGAAAATAGCGGGTCTGAGGATTCTTGTTCT CCATCTTCAATTGTTTGGCATATTCAGGATGATGAGGTGCAGCATTGTGCAAATTCTGAT GTTTCTGAAGAAGTAGAGAAGCCTTTTGTAGATAAAAGGAAGTTGGAGAAACAAGGGTCT TGTTTGTCTGAGATTGAAATGATGAAGGAGAGATTCTCAAAATTGCTGCTGGGAGAAGAC ATGTCTGGTTGTGGAAATGGGGTTTGCACAGCACTTGCAATTTCTAATGCTATCACTAAT TTATGTGCTACTCTTTTTGGGCAAATTTGGAGATTAGAACCTTTAGCTCCAGAGAAAAAG TTAATGTGGCGGAGAGAAATGGAATGGCTTCTCTGTGTTAGTGATCATATTGTAGAACTC ATACCCTCTTGGCAGACATTTCCAGATGGCAGCAAACTTGAGGTTATGACTTCTAGGCCA CGGTCAGACCTTTACGTAAATCTTCCAGCTCTCCGTAAACTGGACAATATGCTCCTTGAT ATATTAGACAGTTTCCGAAGCACAGAATTCTGGTATGTTGACCAAGGAATCTTAGCTCCA GAATCCGATGGGTCGTCCTCATTCAGAAATCCTCTCCCTCGTCAAGAAGAGAAATGGTGG CTACCGGTTCCTAGAACTCCCCCTGGTGGTCTCAGTGAAAATGCAAGAAGGCAGTTGCAG CACAAACGTGATTGCACAAACCAAATCCTGAAAGCTGCAATGGCGATTAACAGCAACAGC TTAGCTGAAATGGAGGTGCCTGAATCATATTATGAAGGCCTTCCTAAGAACGGAAAAGCT AGCTTAGGTGATCTCATCCACCGTTATATCACTTCGGACCAATTTTCACCTGAATGTTTG CTTGACTGTCTTGATATGTCTTCTGAGCATCAAGCATTCGAGATAGCAAACCGAGTGGAG TCTTCAATTTATGTGTGGCGCAGAAGAGCTCACTCAAAACCTTTTGGTAGTACGCACAGG TCCAATTCAAAATCCTCATGGGAAATGGTTAAGGATTTGATGGTTGATGGCGATAAGAGG GAGTTACTTGCTGATAGAGCTGAAAGCCTTTTGCTTTGCTTAAAGCAAAGGTTCCCTGGT CTCCCACAGACAACCTTAGACATGAGCAAAATTCAATATAACAAGGATGTTGGCAAATCT ATTTTGGAGAGCTACTCGAGAGTGCTTGAAAGCCTGGCATTCAATATTATTGCACGCGTT GATGACCTTCTTTATGCAGATGATTTGAATAAACACTCAGATCAATTTGTGCCAATCTCC AAAGTCGGTATCATTGCACATAAGAGCATGGGGACGCCTCTCTCAGTACCTGTCAACGGC ACCCCATATAAAACAGCTTTTACTACACCAAGCTTCTCCCCTTCCCAACATATTAGTCCT GCAAAGGGAGATAGATCAAAAATGTTTGAAGGCAGCAAGCTTTCTACTCGAGGCTTTGGT GTGAAAAAGGTCTTAACTGATTATTTGAGCATCGATTCAAATGGAAAGGACGATTTCAAA CGATCAGATTCATGTTCAAGCACATCTCAAGATGTTTCAGCAACTGCATCCTCACGGTCT TCAGAATGTTCAAGAGAAGTTATCAGCCCGTTGACACATGACTCAGCTGCAAAAGAATAA

Peptide Sequence

PEP ID	Solyc10g086660.2.1
PEP Infomation	Rop guanine nucleotide exchange factor, putative (AHRD V3.3 *** B9T764_RICCO)
Sequence	MDRLESHKDKRREFQPQLKHFIQLDPCVSSKKENHFSVLKFKVSKSIKNLYQKAKVSKRF GSKRFDFDGIVMTNSVYSASSLDDKMEVLSDKSDGAERVMEGYGESLDEKIGIGSSSSSV LLASEENVNEENSGSEDSCSPSSIVWHIQDDEVQHCANSDVSEEVEKPFVDKRKLEKQGS CLSEIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATLFGQIWRLEPLAPEKK LMWRREMEWLLCVSDHIVELIPSWQTFPDGSKLEVMTSRPRSDLYVNLPALRKLDNMLLD ILDSFRSTEFWYVDQGILAPESDGSSSFRNPLPRQEEKWWLPVPRTPPGGLSENARRQLQ HKRDCTNQILKAAMAINSNSLAEMEVPESYYEGLPKNGKASLGDLIHRYITSDQFSPECL LDCLDMSSEHQAFEIANRVESSIYVWRRRAHSKPFGSTHRSNSKSSWEMVKDLMVDGDKR ELLADRAESLLLCLKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIIARV DDLLYADDLNKHSDQFVPISKVGIIAHKSMGTPLSVPVNGTPYKTAFTTPSFSPSQHISP AKGDRSKMFEGSKLSTRGFGVKKVLTDYLSIDSNGKDDFKRSDSCSSTSQDVSATASSRS SECSREVISPLTHDSAAKE*

Transcript Sequence

Transcript ID	Solyc10g086660.2.1
Transcript Infomation	Rop guanine nucleotide exchange factor, putative (AHRD V3.3 *** B9T764_RICCO)
Sequence	GCCCACCAAAATACTTCTTGTGTTGTTTCTTTGTCTGCTTTTATGGCCTCATTGCCATCA TTGTTCTCATTAGCTCACCTTCCTTTACTTCACAACGCTTGTATTTTTGCATTTAATCAT TGCCCACCTTCACTCTTCTAATCAAGATTCTCTTTTTTTTTATAATATTTTTGAAGAAAA AAAATTGACCCCATTTCTTGATTTGTTGTCTGTTTTTACCCCCATTTGAGAAGCAGATAT GGTTGGAGTTGAAAACTTATGGATAGACTTGAGTCACACAAGGACAAAAGGAGAGAATTT CAGCCACAGCTCAAGCATTTTATTCAACTAGACCCTTGTGTAAGTTCCAAGAAAGAGAAC CATTTTTCTGTATTGAAGTTTAAGGTTTCAAAATCCATCAAGAATTTGTATCAAAAAGCT AAAGTGTCAAAGAGGTTTGGAAGTAAAAGGTTTGATTTTGATGGCATTGTGATGACTAAC TCTGTTTATTCTGCTTCTTCTCTTGATGATAAAATGGAGGTTTTGTCTGATAAGAGTGAT GGGGCAGAAAGGGTAATGGAGGGTTATGGGGAGTCTTTGGATGAGAAAATTGGAATAGGC AGTAGTTCAAGTTCTGTTCTTTTAGCGTCAGAGGAAAATGTGAATGAAGAAAATAGCGGG TCTGAGGATTCTTGTTCTCCATCTTCAATTGTTTGGCATATTCAGGATGATGAGGTGCAG CATTGTGCAAATTCTGATGTTTCTGAAGAAGTAGAGAAGCCTTTTGTAGATAAAAGGAAG TTGGAGAAACAAGGGTCTTGTTTGTCTGAGATTGAAATGATGAAGGAGAGATTCTCAAAA TTGCTGCTGGGAGAAGACATGTCTGGTTGTGGAAATGGGGTTTGCACAGCACTTGCAATT TCTAATGCTATCACTAATTTATGTGCTACTCTTTTTGGGCAAATTTGGAGATTAGAACCT TTAGCTCCAGAGAAAAAGTTAATGTGGCGGAGAGAAATGGAATGGCTTCTCTGTGTTAGT GATCATATTGTAGAACTCATACCCTCTTGGCAGACATTTCCAGATGGCAGCAAACTTGAG GTTATGACTTCTAGGCCACGGTCAGACCTTTACGTAAATCTTCCAGCTCTCCGTAAACTG GACAATATGCTCCTTGATATATTAGACAGTTTCCGAAGCACAGAATTCTGGTATGTTGAC CAAGGAATCTTAGCTCCAGAATCCGATGGGTCGTCCTCATTCAGAAATCCTCTCCCTCGT CAAGAAGAGAAATGGTGGCTACCGGTTCCTAGAACTCCCCCTGGTGGTCTCAGTGAAAAT GCAAGAAGGCAGTTGCAGCACAAACGTGATTGCACAAACCAAATCCTGAAAGCTGCAATG GCGATTAACAGCAACAGCTTAGCTGAAATGGAGGTGCCTGAATCATATTATGAAGGCCTT CCTAAGAACGGAAAAGCTAGCTTAGGTGATCTCATCCACCGTTATATCACTTCGGACCAA TTTTCACCTGAATGTTTGCTTGACTGTCTTGATATGTCTTCTGAGCATCAAGCATTCGAG ATAGCAAACCGAGTGGAGTCTTCAATTTATGTGTGGCGCAGAAGAGCTCACTCAAAACCT TTTGGTAGTACGCACAGGTCCAATTCAAAATCCTCATGGGAAATGGTTAAGGATTTGATG GTTGATGGCGATAAGAGGGAGTTACTTGCTGATAGAGCTGAAAGCCTTTTGCTTTGCTTA AAGCAAAGGTTCCCTGGTCTCCCACAGACAACCTTAGACATGAGCAAAATTCAATATAAC AAGGATGTTGGCAAATCTATTTTGGAGAGCTACTCGAGAGTGCTTGAAAGCCTGGCATTC AATATTATTGCACGCGTTGATGACCTTCTTTATGCAGATGATTTGAATAAACACTCAGAT CAATTTGTGCCAATCTCCAAAGTCGGTATCATTGCACATAAGAGCATGGGGACGCCTCTC TCAGTACCTGTCAACGGCACCCCATATAAAACAGCTTTTACTACACCAAGCTTCTCCCCT TCCCAACATATTAGTCCTGCAAAGGGAGATAGATCAAAAATGTTTGAAGGCAGCAAGCTT TCTACTCGAGGCTTTGGTGTGAAAAAGGTCTTAACTGATTATTTGAGCATCGATTCAAAT GGAAAGGACGATTTCAAACGATCAGATTCATGTTCAAGCACATCTCAAGATGTTTCAGCA ACTGCATCCTCACGGTCTTCAGAATGTTCAAGAGAAGTTATCAGCCCGTTGACACATGAC TCAGCTGCAAAAGAATAAGAACTCCTGTATATTTTGCTTCTCAAGAAGCTCCCTTTTGAT GTATTTGAGTGTGAAATAGGTGTTTTAGCATATACCACTCCATTATCAAGTACCTTTTAT GGTCATAAACTTGATATCCTCTGTTCCTTTAGCCATGTCTGATCCAAGTCTGGTGGTAAT GTTACATTGGATTGTACAGAAGAATGTTTTATGGTATTTTCCTGTACCATGTATAATTAT CAGTCAGTTTTGTGTTTTTTCCAAGTAATAATACAAGTACTAAAGATTGTACTTCCTATT TGCATGAGTTATTTACTA