Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g086220.2.1
CDS Infomation

12-oxophytodienoate reductase
Sequence

ATGGAAAATAAAGTCGTTGAAGAGAAACAAGTAGACAAGATCCCTCTAATGAGCCCTTGT
AAAATGGGAAAGTTTGAGTTATGTCATAGAGTTGTATTGGCACCATTAACAAGGCAAAGA
TCTTATGGTTATATTCCTCAACCACATGCTATACTTCATTACTCACAAAGAAGTACAAAT
GGTGGCCTTCTAATAGGAGAGGCCACAGTAATATCTGAGACTGGCATAGGGTACAAAGAT
GTACCTGGTATATGGACAAAAGAGCAAGTGGAGGCTTGGAAACCAATTGTAGATGCAGTT
CATGCTAAAGGAGGAATCTTCTTTTGCCAAATTTGGCATGTTGGTAGAGTTTCCAACAAA
GATTTTCAGCCCAATGGAGAGGATCCTATCTCCTGCACAGACAGAGGACTAACACCTCAA
ATTCGTTCCAATGGCATAGATATTGCACACTTTACACGACCTAGACGGTTGACAACAGAT
GAAATTCCTCAAATTGTTAACGAATTTCGAGTTGCTGCTAGAAACGCAATTGAAGCTGGA
TTTGATGGGGTTGAGATCCACGGAGCTCATGGCTATCTAATTGATCAGTTTATGAAAGAT
CAAGTTAACGATCGAAGTGATAAATATGGAGGGTCTTTAGAGAATCGTTGTAGATTTGCA
CTTGAAATAGTGGAAGCAGTTGCAAATGAGATTGGATCTGACCGAGTTGGTATAAGGATA
TCCCCATTTGCGCATTATAATGAAGCAGGGGACACGAACCCGACTGCTTTGGGACTTTAC
ATGGTGGAATCGTTGAACAAGTATGATCTCGCGTATTGCCATGTGGTTGAGCCTAGGATG
AAAACAGCTTGGGAAAAAATTGAATGTACTGAAAGCCTTGTACCGATGAGGAAGGCATAT
AAAGGTACTTTTATAGTAGCTGGTGGTTACGATAGAGAAGATGGAAACAGAGCTTTGATT
GAAGATCGAGCTGATCTTGTTGCGTATGGACGTTTATTCATATCTAATCCAGATTTACCA
AAGCGATTTGAGCTAAATGCTCCTCTTAACAAGTATAACAGAGACACATTTTATACTTCT
GATCCAATTGTTGGCTATACTGATTATCCATTTCTAGAAACCATGACATGA

Peptide Sequence

PEP ID

Solyc10g086220.2.1
PEP Infomation

12-oxophytodienoate reductase
Sequence

MENKVVEEKQVDKIPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTN
GGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNK
DFQPNGEDPISCTDRGLTPQIRSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEAG
FDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRI
SPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAY
KGTFIVAGGYDREDGNRALIEDRADLVAYGRLFISNPDLPKRFELNAPLNKYNRDTFYTS
DPIVGYTDYPFLETMT*

Transcript Sequence

Transcript ID

Solyc10g086220.2.1
Transcript Infomation

12-oxophytodienoate reductase
Sequence

AATTTCTCGTTTGTTATAAATATTATCCATAATCACTAACAAGAAAGCTTACACCAATGG
AAAATAAAGTCGTTGAAGAGAAACAAGTAGACAAGATCCCTCTAATGAGCCCTTGTAAAA
TGGGAAAGTTTGAGTTATGTCATAGAGTTGTATTGGCACCATTAACAAGGCAAAGATCTT
ATGGTTATATTCCTCAACCACATGCTATACTTCATTACTCACAAAGAAGTACAAATGGTG
GCCTTCTAATAGGAGAGGCCACAGTAATATCTGAGACTGGCATAGGGTACAAAGATGTAC
CTGGTATATGGACAAAAGAGCAAGTGGAGGCTTGGAAACCAATTGTAGATGCAGTTCATG
CTAAAGGAGGAATCTTCTTTTGCCAAATTTGGCATGTTGGTAGAGTTTCCAACAAAGATT
TTCAGCCCAATGGAGAGGATCCTATCTCCTGCACAGACAGAGGACTAACACCTCAAATTC
GTTCCAATGGCATAGATATTGCACACTTTACACGACCTAGACGGTTGACAACAGATGAAA
TTCCTCAAATTGTTAACGAATTTCGAGTTGCTGCTAGAAACGCAATTGAAGCTGGATTTG
ATGGGGTTGAGATCCACGGAGCTCATGGCTATCTAATTGATCAGTTTATGAAAGATCAAG
TTAACGATCGAAGTGATAAATATGGAGGGTCTTTAGAGAATCGTTGTAGATTTGCACTTG
AAATAGTGGAAGCAGTTGCAAATGAGATTGGATCTGACCGAGTTGGTATAAGGATATCCC
CATTTGCGCATTATAATGAAGCAGGGGACACGAACCCGACTGCTTTGGGACTTTACATGG
TGGAATCGTTGAACAAGTATGATCTCGCGTATTGCCATGTGGTTGAGCCTAGGATGAAAA
CAGCTTGGGAAAAAATTGAATGTACTGAAAGCCTTGTACCGATGAGGAAGGCATATAAAG
GTACTTTTATAGTAGCTGGTGGTTACGATAGAGAAGATGGAAACAGAGCTTTGATTGAAG
ATCGAGCTGATCTTGTTGCGTATGGACGTTTATTCATATCTAATCCAGATTTACCAAAGC
GATTTGAGCTAAATGCTCCTCTTAACAAGTATAACAGAGACACATTTTATACTTCTGATC
CAATTGTTGGCTATACTGATTATCCATTTCTAGAAACCATGACATGA