Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g085460.2.1
CDS Infomation	Nbs-lrr resistance protein, putative (AHRD V3.3 *** A0A061FEU3_THECC)
Sequence	ATGGCCGATCCTGTTATTGGTGCTACTGTTCAAGTTTTGCTTGAGAAGCTGCTTTCTCTC TCTATTGAGGAGGTCAAAACATTAAGGAACTGCAAGAAAAATCTCTCAAAGCTGACAAAA CATGTAACCATGATACAAGCTTACACGCATGATGCTGAAACACGACAAGTCGAAGATAAT CAGGCTGTGGAAGAATGGCTTAAGATGCTTGAGAAAATTGCTGAAGATGCTGAAAATGTG TTTGACAAATTCACATATGTATCTATCAAAGCACGAGTGATGAAAAACCAAATGAAACTG ATGGAGAAGGTTAGTCACTTCTTTTCTCAGACTGTTTTCAAGTACAAAATGTCTAGAAAA ATCAATGACATCAATGAAGAGTTGAGGGCTATCAATGAGTTAGCCAATAACCTCGGTCTC CAATTACTGACTGTTCCTTCTCGCAAAATACCACAAATCCGAGAAACAGATTCCTCTGCT TCGTATGTTGTTGGTAGAGACAAAGATGTTGCTGAAGTGAAGGAGAAGATTTTGAACATG AGAAAGGATGTTGTTCTGTGCACCATTCCCATTGTGGGTATGGGGGGTTTAGGGAAAACT ACTCTGGTAAAGAGAATTTTCAATGACGTAGAGATTGAAAAACACTTCGTAAAGAGAGTT TGGTTGTGTCTACCTGAAATGTCAGACGCTAAGAGCTTTCTTGAACTGATCCTCCATTCA TTGACAGGGCAGAAACTTGAGCTCCAGAGTAGAGATATAATAGTCAAGAAGCTACAAGAT GCATTGGGAGAAAAAAGGTATTTGCTTGTCCTGGATGATTTGTGGCGTGTTGGATCTACA CATTGGTATGAGTTCATGGACACCTTAAAAGGAATCAATACATCCAGAGGAAACTGCATT CTCGTGACTACTCGTATGAAGCAGGTGGCATCCATAGTAGCTGCAGATCTTCATATGTTG GGGAAATTAGCAGATGATCATTGTTTGTCCATTTTCAAACAAAGAGCATTTGTTGATGGG GAAGTTCCGCAGGAAATACTGAGCATGGAGAAAAAGATAGTTGAACTATGTCAAGGTCTA CCGTTGGCTGCAAGTGTTTTGGGATGCCTCTTATGCAACAAGGAAAAACATGAATGGCAG GCAATTCTTGTTGCAGGTGAAGATGATAATGGGGAAAATAGCTTAAAGAAAATCCTAAAA CTAAGCTATGATTATCTACCATCTCCACATCTGAAAAAGTGTTTTGCTTACTTTGCCATG TTTCCAAAAGATTTTGAGTTTGAGAAGGACCAACTAATCCAACTCTGGATGGCAGAAGGC TTTCTTCGTCCATGTCAAGAGACCCCTGTGATGGAAGACGTTGGGATCAAGTTTTTCCAA CTCTTGTTCCAATATTCCTTGCTGCAAGATGTTAAGCTAGATGAATACAACAATATCACA CACTGTAAGATGCATGATCTTGTGCATGATTTGGCTGGAGATATTTTGAAGTCTAAACTA TTTGATAAAAAGAGTGTTGAAGGTGAAAATCTTTCTCAAGTTCGATACTTTGGATGGGAC TCACCAAGTGATCAAATAGATAAGATAAGCGAGCCAGGACGTTTGTGCACATTGTTCTGG GAAAGCAATATATCTGATGATATGCTATTGAGCTTTCAGTTCTTGAGAGTTTTAAATTTG TCCGCATCAGGCATCAAGGAGTTGTCAGCCAAAATCAGCAAGCTAATATTCTTGAGATAT CTTGATATCTCCGACACTCGTATCGAAGACTTCCCCGACTCCATTTGCAAGCTCTACAAT TTGCAAACATTTAGAGTCAATGACTGTTCTTCACTCAGAAAGCTTCCAGAAGAAATGGCA AATATGATAAGTTTGAGACACATATATTGCAATGGATCAGATATGCAGACGCCACTTAAT ATGGGGCAATTGACCAGTCTTCAGACGCTACGGGTTTTTTACATAGGTTCAGAGAAAGGT CGTCGGATAAAAGAATTAGGTCGTTTGAAAAACCTTAGAGGTAAATTGACGATCAATCAT CTCCAATTAGTCAGAAATAAAGAAGAGGCCCAAACAGCAAATTTACAGGAGAAACCCAAT ATCTACAAGCTGGTGTATTCATGGTCCCATGATGAATCAGAAGGCTGTGAGATCAATGAT GAGCATGTGTTGGATGGTCTTCAACCGCATCCTAACTTGAAAGCCTTATCAGTAGTGGAC TATTTAGGGACTAAACTTCCCTCATGGTTCAGTGAGGAGTTGCTACCAAATTTGGTCAAG TTGAAATTAAGTGGTTGTAAAAGGTGCACAGAAATTCCATCCCTTGGCCAACTGAAATTC CTTCGACATCTTGAGCTGGTAGGATTCCATGAGTTGAAATGCATTGGACCTGCTTTATAT GGTGTTGAGATTAGCAATATTGGATCAAGCAGCATTATCCAAGTGTTCCCTTCATTGAAA GAACTAGTATTGGAGGATATGCGTAGCCTTATTGAGTGGAAGGGAGATGAAGTTGGAGTA AGAATGTTTCTTAGGCTTGAGAAGTTGCGCATTAGTAACTGTCCATTGTTAAAAAGTACT CCAAGTCAATTTGAAATCCTCCATGAATTAATAATTGAAGGAGTTGACAGTGAAATGCCA TTGTTGAACTTGTGCAGCAACTTGATATCTCTTGTGAAGCTTGATGTTGATAATGTGAAA GAGCTCACTTGTCTTTCAGATGTTATGCTACGCAACAATGTTTCTCTTCAATACATATCG GTCGTCGACTGTGGAGAGTTTCGTGAATTTCCACAAAGCCTGTACAATCTCCATTCTCTT GAGAGCTTACGAATACAACACTGCCCCAATTTCAGTTCTTTTATTGTTCCCTGTGGAGAG AACTACTTGACTTCCCTCCAAAATTTTGAGTTACAAGGGTGTAATGGATTGACCAGTTTA CCAAGTGGAATGCTAGAGCAATGCCGGTCTCTAAAGAATTTGTCGGTCAGCTGGTGTGAC AACTTAGTTTCCTTCCCTTTACATGAGTGCGAAATGCCTTCACTTTCATGGTTGGATATA TCACAATGTCCCAAATTGATTAGTGTATCAACAGGGTGCCTGCACCGTCTCACTGGGTTA ATTGTATTGGGAATTGGTCCTTTCTCAGAGAAGGTGGATTTTGAGGTATTCCAATTGATT TTTAGTGGTGTTCAACAGCTGTTTTCTCTTCGTTCTTTGTGGGTGTACGGACATTTGCAC TGGGATTCTCTGCCCTATCAGATTATGCAACTCTCTGCCCTAAAAAATCTCTCTATAGAT GATTTCGGAATCGAGGCTCTTCCTCATAGATTTGACAACCTTACATCTCTTGAAACATTA TCGCTAAAGAGGTGCAAACGGCTAAGACATGTGGACTTCTCAGATGCCATAACCAAATTA CGGAATCTGTGGATACAGGATTGTCCATTATTAGAAGCTCTGTCGGATGGGCTCGGCAAC CTTGCTTCTTTGGAACAGTTACTTATTTTGAATTGCAAAAAACTAGAGCATCTGCCATCC AGAGATGCCATGCGACGCCTCACCAAATTAAGGATCCTGCATATTGTTGGCTGCCCACAG TTAGGAGAAAGCTGCACCAAACAGAGTGGTCCTAACTCCCAGTGGTCCAAAATTTCCCAT ATTCCAGATATTGAAGTGTGCGTTCATGAAGATAACGGAAGCAATGGCTCGACTTATTGG TGA

Peptide Sequence

PEP ID	Solyc10g085460.2.1
PEP Infomation	Nbs-lrr resistance protein, putative (AHRD V3.3 *** A0A061FEU3_THECC)
Sequence	MADPVIGATVQVLLEKLLSLSIEEVKTLRNCKKNLSKLTKHVTMIQAYTHDAETRQVEDN QAVEEWLKMLEKIAEDAENVFDKFTYVSIKARVMKNQMKLMEKVSHFFSQTVFKYKMSRK INDINEELRAINELANNLGLQLLTVPSRKIPQIRETDSSASYVVGRDKDVAEVKEKILNM RKDVVLCTIPIVGMGGLGKTTLVKRIFNDVEIEKHFVKRVWLCLPEMSDAKSFLELILHS LTGQKLELQSRDIIVKKLQDALGEKRYLLVLDDLWRVGSTHWYEFMDTLKGINTSRGNCI LVTTRMKQVASIVAADLHMLGKLADDHCLSIFKQRAFVDGEVPQEILSMEKKIVELCQGL PLAASVLGCLLCNKEKHEWQAILVAGEDDNGENSLKKILKLSYDYLPSPHLKKCFAYFAM FPKDFEFEKDQLIQLWMAEGFLRPCQETPVMEDVGIKFFQLLFQYSLLQDVKLDEYNNIT HCKMHDLVHDLAGDILKSKLFDKKSVEGENLSQVRYFGWDSPSDQIDKISEPGRLCTLFW ESNISDDMLLSFQFLRVLNLSASGIKELSAKISKLIFLRYLDISDTRIEDFPDSICKLYN LQTFRVNDCSSLRKLPEEMANMISLRHIYCNGSDMQTPLNMGQLTSLQTLRVFYIGSEKG RRIKELGRLKNLRGKLTINHLQLVRNKEEAQTANLQEKPNIYKLVYSWSHDESEGCEIND EHVLDGLQPHPNLKALSVVDYLGTKLPSWFSEELLPNLVKLKLSGCKRCTEIPSLGQLKF LRHLELVGFHELKCIGPALYGVEISNIGSSSIIQVFPSLKELVLEDMRSLIEWKGDEVGV RMFLRLEKLRISNCPLLKSTPSQFEILHELIIEGVDSEMPLLNLCSNLISLVKLDVDNVK ELTCLSDVMLRNNVSLQYISVVDCGEFREFPQSLYNLHSLESLRIQHCPNFSSFIVPCGE NYLTSLQNFELQGCNGLTSLPSGMLEQCRSLKNLSVSWCDNLVSFPLHECEMPSLSWLDI SQCPKLISVSTGCLHRLTGLIVLGIGPFSEKVDFEVFQLIFSGVQQLFSLRSLWVYGHLH WDSLPYQIMQLSALKNLSIDDFGIEALPHRFDNLTSLETLSLKRCKRLRHVDFSDAITKL RNLWIQDCPLLEALSDGLGNLASLEQLLILNCKKLEHLPSRDAMRRLTKLRILHIVGCPQ LGESCTKQSGPNSQWSKISHIPDIEVCVHEDNGSNGSTYW*

Transcript Sequence

Transcript ID	Solyc10g085460.2.1
Transcript Infomation	Nbs-lrr resistance protein, putative (AHRD V3.3 *** A0A061FEU3_THECC)
Sequence	TTTTTTTTCACAGTTTGAATTATTGTATACTATCAATTATTGTCCTTTTAATTTGGTGCC ATAAACAAGTAGCAAAAGAAGACTTTAGTGCTGAGGAAGAAGACTGACTTTGTGAAGCTA AGGAGCAAACGCAACAATGGCCGATCCTGTTATTGGTGCTACTGTTCAAGTTTTGCTTGA GAAGCTGCTTTCTCTCTCTATTGAGGAGGTCAAAACATTAAGGAACTGCAAGAAAAATCT CTCAAAGCTGACAAAACATGTAACCATGATACAAGCTTACACGCATGATGCTGAAACACG ACAAGTCGAAGATAATCAGGCTGTGGAAGAATGGCTTAAGATGCTTGAGAAAATTGCTGA AGATGCTGAAAATGTGTTTGACAAATTCACATATGTATCTATCAAAGCACGAGTGATGAA AAACCAAATGAAACTGATGGAGAAGGTTAGTCACTTCTTTTCTCAGACTGTTTTCAAGTA CAAAATGTCTAGAAAAATCAATGACATCAATGAAGAGTTGAGGGCTATCAATGAGTTAGC CAATAACCTCGGTCTCCAATTACTGACTGTTCCTTCTCGCAAAATACCACAAATCCGAGA AACAGATTCCTCTGCTTCGTATGTTGTTGGTAGAGACAAAGATGTTGCTGAAGTGAAGGA GAAGATTTTGAACATGAGAAAGGATGTTGTTCTGTGCACCATTCCCATTGTGGGTATGGG GGGTTTAGGGAAAACTACTCTGGTAAAGAGAATTTTCAATGACGTAGAGATTGAAAAACA CTTCGTAAAGAGAGTTTGGTTGTGTCTACCTGAAATGTCAGACGCTAAGAGCTTTCTTGA ACTGATCCTCCATTCATTGACAGGGCAGAAACTTGAGCTCCAGAGTAGAGATATAATAGT CAAGAAGCTACAAGATGCATTGGGAGAAAAAAGGTATTTGCTTGTCCTGGATGATTTGTG GCGTGTTGGATCTACACATTGGTATGAGTTCATGGACACCTTAAAAGGAATCAATACATC CAGAGGAAACTGCATTCTCGTGACTACTCGTATGAAGCAGGTGGCATCCATAGTAGCTGC AGATCTTCATATGTTGGGGAAATTAGCAGATGATCATTGTTTGTCCATTTTCAAACAAAG AGCATTTGTTGATGGGGAAGTTCCGCAGGAAATACTGAGCATGGAGAAAAAGATAGTTGA ACTATGTCAAGGTCTACCGTTGGCTGCAAGTGTTTTGGGATGCCTCTTATGCAACAAGGA AAAACATGAATGGCAGGCAATTCTTGTTGCAGGTGAAGATGATAATGGGGAAAATAGCTT AAAGAAAATCCTAAAACTAAGCTATGATTATCTACCATCTCCACATCTGAAAAAGTGTTT TGCTTACTTTGCCATGTTTCCAAAAGATTTTGAGTTTGAGAAGGACCAACTAATCCAACT CTGGATGGCAGAAGGCTTTCTTCGTCCATGTCAAGAGACCCCTGTGATGGAAGACGTTGG GATCAAGTTTTTCCAACTCTTGTTCCAATATTCCTTGCTGCAAGATGTTAAGCTAGATGA ATACAACAATATCACACACTGTAAGATGCATGATCTTGTGCATGATTTGGCTGGAGATAT TTTGAAGTCTAAACTATTTGATAAAAAGAGTGTTGAAGGTGAAAATCTTTCTCAAGTTCG ATACTTTGGATGGGACTCACCAAGTGATCAAATAGATAAGATAAGCGAGCCAGGACGTTT GTGCACATTGTTCTGGGAAAGCAATATATCTGATGATATGCTATTGAGCTTTCAGTTCTT GAGAGTTTTAAATTTGTCCGCATCAGGCATCAAGGAGTTGTCAGCCAAAATCAGCAAGCT AATATTCTTGAGATATCTTGATATCTCCGACACTCGTATCGAAGACTTCCCCGACTCCAT TTGCAAGCTCTACAATTTGCAAACATTTAGAGTCAATGACTGTTCTTCACTCAGAAAGCT TCCAGAAGAAATGGCAAATATGATAAGTTTGAGACACATATATTGCAATGGATCAGATAT GCAGACGCCACTTAATATGGGGCAATTGACCAGTCTTCAGACGCTACGGGTTTTTTACAT AGGTTCAGAGAAAGGTCGTCGGATAAAAGAATTAGGTCGTTTGAAAAACCTTAGAGGTAA ATTGACGATCAATCATCTCCAATTAGTCAGAAATAAAGAAGAGGCCCAAACAGCAAATTT ACAGGAGAAACCCAATATCTACAAGCTGGTGTATTCATGGTCCCATGATGAATCAGAAGG CTGTGAGATCAATGATGAGCATGTGTTGGATGGTCTTCAACCGCATCCTAACTTGAAAGC CTTATCAGTAGTGGACTATTTAGGGACTAAACTTCCCTCATGGTTCAGTGAGGAGTTGCT ACCAAATTTGGTCAAGTTGAAATTAAGTGGTTGTAAAAGGTGCACAGAAATTCCATCCCT TGGCCAACTGAAATTCCTTCGACATCTTGAGCTGGTAGGATTCCATGAGTTGAAATGCAT TGGACCTGCTTTATATGGTGTTGAGATTAGCAATATTGGATCAAGCAGCATTATCCAAGT GTTCCCTTCATTGAAAGAACTAGTATTGGAGGATATGCGTAGCCTTATTGAGTGGAAGGG AGATGAAGTTGGAGTAAGAATGTTTCTTAGGCTTGAGAAGTTGCGCATTAGTAACTGTCC ATTGTTAAAAAGTACTCCAAGTCAATTTGAAATCCTCCATGAATTAATAATTGAAGGAGT TGACAGTGAAATGCCATTGTTGAACTTGTGCAGCAACTTGATATCTCTTGTGAAGCTTGA TGTTGATAATGTGAAAGAGCTCACTTGTCTTTCAGATGTTATGCTACGCAACAATGTTTC TCTTCAATACATATCGGTCGTCGACTGTGGAGAGTTTCGTGAATTTCCACAAAGCCTGTA CAATCTCCATTCTCTTGAGAGCTTACGAATACAACACTGCCCCAATTTCAGTTCTTTTAT TGTTCCCTGTGGAGAGAACTACTTGACTTCCCTCCAAAATTTTGAGTTACAAGGGTGTAA TGGATTGACCAGTTTACCAAGTGGAATGCTAGAGCAATGCCGGTCTCTAAAGAATTTGTC GGTCAGCTGGTGTGACAACTTAGTTTCCTTCCCTTTACATGAGTGCGAAATGCCTTCACT TTCATGGTTGGATATATCACAATGTCCCAAATTGATTAGTGTATCAACAGGGTGCCTGCA CCGTCTCACTGGGTTAATTGTATTGGGAATTGGTCCTTTCTCAGAGAAGGTGGATTTTGA GGTATTCCAATTGATTTTTAGTGGTGTTCAACAGCTGTTTTCTCTTCGTTCTTTGTGGGT GTACGGACATTTGCACTGGGATTCTCTGCCCTATCAGATTATGCAACTCTCTGCCCTAAA AAATCTCTCTATAGATGATTTCGGAATCGAGGCTCTTCCTCATAGATTTGACAACCTTAC ATCTCTTGAAACATTATCGCTAAAGAGGTGCAAACGGCTAAGACATGTGGACTTCTCAGA TGCCATAACCAAATTACGGAATCTGTGGATACAGGATTGTCCATTATTAGAAGCTCTGTC GGATGGGCTCGGCAACCTTGCTTCTTTGGAACAGTTACTTATTTTGAATTGCAAAAAACT AGAGCATCTGCCATCCAGAGATGCCATGCGACGCCTCACCAAATTAAGGATCCTGCATAT TGTTGGCTGCCCACAGTTAGGAGAAAGCTGCACCAAACAGAGTGGTCCTAACTCCCAGTG GTCCAAAATTTCCCATATTCCAGATATTGAAGTGTGCGTTCATGAAGATAACGGAAGCAA TGGCTCGACTTATTGGTGAAACGCTAGAGAGATGAGCCGGTGAGTGTGGTTGCATCTTGC ACGAAGCTTGAAAGTTCAAGGATAATTTCTCCGTTGATATTAACTTTCGCGATTGAAGTT CTTCAACAAAGATAGCTGTCATGAATCATATAGTATCAATGAGCCGCTCATTGGCTCTTA CAATGTCCTCAGCAGTATCTGTTCATCTTGATAGGTCTTGATTTCTCCTAAAATCTCCTT TTTTTTATTGTACTTGTAATAGTCTGCTTTTCCATTCTCCTAGGAGGAAACGTGTTCTAA AACTAACTTTTTACCATTTCCCGCGCTTCAGATTCATGTTTGAAACACCAGCATTGACCT TGTCGAAATGCTACTTCTGTTAGATGTGTTTCTGTTTCATCGTTGGCAAGGGGAAACTGC ATTCCATAAACTTATTTCCCTTAAAGTACCCTAAAAGGGCCATGTCGTCATGAGTGATTA AGTTTGTTGCACATGTATTATGATAAACAGTTGAGCTTTTCGCGTCTATTGAAGTGAGAG TCCAATGGTAACGCCCAGCCCACAGCTCCTGAAATCAGTTGACGTAATTCTAAACTGAAT TAAACTAGCAGTGGTGAATACCATAGTTGTATCATGTATGGTGTAAAGTTTCTTGGATCT AGTCCTCCTACAAGTTGTTAGTTATGGTTGTAAAAATACATAACTAACAACTAGTTGCGC ACAATCACTCTGCTTAATAATTAAAGGTCACAGACATGAATAAGATTTGCTTGTAAAAAT GCAGTGAAAGAAAGAAAAATTTCACGCGTTAAAAAGTTAGTGGATCCTCATACAAAGTTT TGTTGGTGAATATCTCACTCAAAATAAATCTTTTCTACAATTTCCCCATTCTTTTCGTCT AGAATTTTCATCTAAAATAAATAAAAGGCTCAAGAAGTCCCTAATAATTTCATCCCCCAA CAAACATAGCTATACTTCAAATTTTACAACAATTCCTAAGAAGTAATTCTAAAATCCTTC TTTCACTTTACTTGTTGGCAACTTCCCTTCGCCCTTTTCCCCTTTCATCTCC