Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g085060.2.1
CDS Infomation

Defective in exine formation protein (AHRD V3.3 *** G7JLW6_MEDTR)
Sequence

ATGAAAGCTAGGGTTTTACTACTCTGTTTTCTGTTATTATCTTCAAATTTCCGTTTTCTG
CAATCTGAAGACACGACAAAGAACAAATTTCGAGAACGGGAAGCCACTGATGATGCCCTC
GCTTACCCCAATTTAGACGAAGATGAATTGTTTAATACACAGTGCCCTCAGCATTTGGAG
CTGAGATGGCAGACAGAAGTTAGTTCCAGCGTATATGCATCCCCCTTGATTGCTGATATT
AACAGTGATGGAAAGCTTGAGGTGGTAGTTCCCTCTTTTGTTCATTACTTAGAAGTTCTG
GAAGGTTCTGATGGAGATAAAGTTCCAGGATGGCCAGCATTCCATCAATCAACTGTTCAT
TCCACTCCTTTCCTGTATGACATTGACAAGGATGGGGTGAGGGAGATAGGCTTGGCCACC
TATGATGGTGAGGTGCTCTTTTTCAGGGTCTCAGGATACCTGATGTCTGATAAATTGGAG
ATTCCTCGGCTGAGAGTTAAAAAAGATTGGCATGTTGGTTTGAAACAGGATCCGGTGGAC
CGTTCTCATCCAGATGTACATGATGACCAACTCATACAGGAGCCTGTCATGGACTCCGCA
GCCAGTCACAATGCATCCACTCATGGAGGCAACTATTCAAAATCTACTGCATCTGAAGTT
AACACAGAAACCCATTCTATTCAAAAAGAAGTCAACCATGACGCTTCTAATGCTTCAATA
TTTTTGCCGTCAGGAGTTTCACCTAACACATCAAATTCATCTAATTTAGAGGACCAAAAG
GGGAAAAATGATAGTGTAGCTGGTGGAGAAGTTAAAATGACTAACTTAAACAATATTACT
CTGAATTCTGATAATGAGAAAATCAGTGTCCCAGAGAATGGAACAAGTAAAGGGAGAAGG
CTTCTAGAAGACAATGTCTTGAGAAGTTCGGAGGAAAGTGATTCTGGATCCAAAGATGTT
AGAACTGCAACTGTGGAAAATGAAGGAGGTCTGGAAGCGGAAGCTGATTCATCATTTGAG
TTATTCCGGGATAATGAGGATATCCCTGATGATTATGATTATGACGAGGATGATTACCTT
GATGATGATGAATTATGGAAAACTGAAGAATTTGAGGAACCAGAACATGAGAAATTGGAG
AATTATGTTCATATTGATGCTCATATTTTATGTACTCCTGTCATTGCTGACATTGACAGC
GATGGGGTGTCGGAGATGATTGTTGCAGTATCCTACTTCTTTGACCATGAGTACTACAAC
AATCAGGAGCATATAAAGGAACTTGGAGACATTGAAATAGGAAAATATGTTGCTGGTGGT
ATTGTTGTTTTCAATCTAGATACCAAGCAAGTCAAATGGTCTGCACAGTTGGACTTAAGT
ACTGACGACGGGACATTCCGTGCCTATATATACTCTTCTCCTACGGTAGTTGATTTGGAT
GGTGATGGAAACATGGACATTCTAGTTGGGACCTCCTATGGCTTGTTTTATGTGTTGGAT
CACAACGGCAAAGTCAGGGAAAAGTTTCCTCTTGAAATGGCTGAAATCCAAGGAGCAGTA
GTTGCAGCTGATATCAATGATGATGGAAAGATTGAACTAGTTACAACAGATTCACATGGA
AATGTTGCTGCTTGGACTGCACAAGGTACAGAAATTTGGGAAACGCATCTCAAGAGCCTT
GTTCCTCAGGGACCGGTCATTGGCGATGTGGATGGAGATGGCCATACGGATGTCGTTGTC
CCAACACTTTCTGGGAATATATATGTTCTGAATGGCAAGGACGGCTCATTTGTACGTCCA
TATCCTTATAGGACTCATGGTAGGGTGATGAATCGAGCACTTCTCGTCGACTTGAGCAAA
CGTGGGGAGAAGAAAAAAGGGCTTACAATTGTCACAATGTCATTTGATGGTTATTTGTAT
CTCATAGACGGACCAACATCATGTGCTGATGTTGTAGATATTGGTGAAACTTCATACAGC
ATGGTCTTGGCTGATAATGTTGATGGTGGCGATGATCTTGATCTTATTGTAACAACGATG
AATGGTAACGTCTTCTGTTTCTCCACGCCTGCCCCACATCATCCCCTCAAAACTTGGAGA
TCTCCTAATCAAGGGAGAAACAATGCTGCTTACCGTAATGATCGTCAGGGGATCTATGCA
ACTCCGTCTTCAAGAGCTTTCCGTGATGAAGAGGGCAAGAGCTTTTGGGTTGAAATAGAG
ATTGTTGATAAATACAGATACCCATCTGGGTCTCAAGCTCCTTATAATGTCACGGTGAGC
TTGTTAGTTCCTGGTAATTACCAAGGAGAACGAACTATTAAGCAAAATAAGATATTCGAC
CGTCCTGGAAAACATCAGCTTATGCTCCCAACTGTTAATGTAAGGACTGCTGGGACTGTT
TTGCTGGAGATGGTTGACAAGAACGGACTATATTTCTCAGATGATTTCTCTATAACATTC
CATATGCATTATTATAAGCTATTGAAATGGATTCTCGTACTCCCTATGCTGGGAATGTTT
GGTGTGCTTGTCATCCTTCGTCCACAGGAGGCCATGCCACTACCATCATTTTCGCGGAAC
ACTGATTTATGA

Peptide Sequence

PEP ID

Solyc10g085060.2.1
PEP Infomation

Defective in exine formation protein (AHRD V3.3 *** G7JLW6_MEDTR)
Sequence

MKARVLLLCFLLLSSNFRFLQSEDTTKNKFREREATDDALAYPNLDEDELFNTQCPQHLE
LRWQTEVSSSVYASPLIADINSDGKLEVVVPSFVHYLEVLEGSDGDKVPGWPAFHQSTVH
STPFLYDIDKDGVREIGLATYDGEVLFFRVSGYLMSDKLEIPRLRVKKDWHVGLKQDPVD
RSHPDVHDDQLIQEPVMDSAASHNASTHGGNYSKSTASEVNTETHSIQKEVNHDASNASI
FLPSGVSPNTSNSSNLEDQKGKNDSVAGGEVKMTNLNNITLNSDNEKISVPENGTSKGRR
LLEDNVLRSSEESDSGSKDVRTATVENEGGLEAEADSSFELFRDNEDIPDDYDYDEDDYL
DDDELWKTEEFEEPEHEKLENYVHIDAHILCTPVIADIDSDGVSEMIVAVSYFFDHEYYN
NQEHIKELGDIEIGKYVAGGIVVFNLDTKQVKWSAQLDLSTDDGTFRAYIYSSPTVVDLD
GDGNMDILVGTSYGLFYVLDHNGKVREKFPLEMAEIQGAVVAADINDDGKIELVTTDSHG
NVAAWTAQGTEIWETHLKSLVPQGPVIGDVDGDGHTDVVVPTLSGNIYVLNGKDGSFVRP
YPYRTHGRVMNRALLVDLSKRGEKKKGLTIVTMSFDGYLYLIDGPTSCADVVDIGETSYS
MVLADNVDGGDDLDLIVTTMNGNVFCFSTPAPHHPLKTWRSPNQGRNNAAYRNDRQGIYA
TPSSRAFRDEEGKSFWVEIEIVDKYRYPSGSQAPYNVTVSLLVPGNYQGERTIKQNKIFD
RPGKHQLMLPTVNVRTAGTVLLEMVDKNGLYFSDDFSITFHMHYYKLLKWILVLPMLGMF
GVLVILRPQEAMPLPSFSRNTDL*

Transcript Sequence

Transcript ID

Solyc10g085060.2.1
Transcript Infomation

Defective in exine formation protein (AHRD V3.3 *** G7JLW6_MEDTR)
Sequence

TAATACGAGATTAAGTGAAACGATATGAAACCGCAAGGGGTAATGTTTTGGCCGGAGCTG
AACTGAATAGCAAAGACTTTTCTGTGTAAAAAATACACTCAATTTGGAAAGTTTTAGCAG
TCTGAAATTGCGATACTTCCTCCGGTGATCTCAATGAAAGCTAGGGTTTTACTACTCTGT
TTTCTGTTATTATCTTCAAATTTCCGTTTTCTGCAATCTGAAGACACGACAAAGAACAAA
TTTCGAGAACGGGAAGCCACTGATGATGCCCTCGCTTACCCCAATTTAGACGAAGATGAA
TTGTTTAATACACAGTGCCCTCAGCATTTGGAGCTGAGATGGCAGACAGAAGTTAGTTCC
AGCGTATATGCATCCCCCTTGATTGCTGATATTAACAGTGATGGAAAGCTTGAGGTGGTA
GTTCCCTCTTTTGTTCATTACTTAGAAGTTCTGGAAGGTTCTGATGGAGATAAAGTTCCA
GGATGGCCAGCATTCCATCAATCAACTGTTCATTCCACTCCTTTCCTGTATGACATTGAC
AAGGATGGGGTGAGGGAGATAGGCTTGGCCACCTATGATGGTGAGGTGCTCTTTTTCAGG
GTCTCAGGATACCTGATGTCTGATAAATTGGAGATTCCTCGGCTGAGAGTTAAAAAAGAT
TGGCATGTTGGTTTGAAACAGGATCCGGTGGACCGTTCTCATCCAGATGTACATGATGAC
CAACTCATACAGGAGCCTGTCATGGACTCCGCAGCCAGTCACAATGCATCCACTCATGGA
GGCAACTATTCAAAATCTACTGCATCTGAAGTTAACACAGAAACCCATTCTATTCAAAAA
GAAGTCAACCATGACGCTTCTAATGCTTCAATATTTTTGCCGTCAGGAGTTTCACCTAAC
ACATCAAATTCATCTAATTTAGAGGACCAAAAGGGGAAAAATGATAGTGTAGCTGGTGGA
GAAGTTAAAATGACTAACTTAAACAATATTACTCTGAATTCTGATAATGAGAAAATCAGT
GTCCCAGAGAATGGAACAAGTAAAGGGAGAAGGCTTCTAGAAGACAATGTCTTGAGAAGT
TCGGAGGAAAGTGATTCTGGATCCAAAGATGTTAGAACTGCAACTGTGGAAAATGAAGGA
GGTCTGGAAGCGGAAGCTGATTCATCATTTGAGTTATTCCGGGATAATGAGGATATCCCT
GATGATTATGATTATGACGAGGATGATTACCTTGATGATGATGAATTATGGAAAACTGAA
GAATTTGAGGAACCAGAACATGAGAAATTGGAGAATTATGTTCATATTGATGCTCATATT
TTATGTACTCCTGTCATTGCTGACATTGACAGCGATGGGGTGTCGGAGATGATTGTTGCA
GTATCCTACTTCTTTGACCATGAGTACTACAACAATCAGGAGCATATAAAGGAACTTGGA
GACATTGAAATAGGAAAATATGTTGCTGGTGGTATTGTTGTTTTCAATCTAGATACCAAG
CAAGTCAAATGGTCTGCACAGTTGGACTTAAGTACTGACGACGGGACATTCCGTGCCTAT
ATATACTCTTCTCCTACGGTAGTTGATTTGGATGGTGATGGAAACATGGACATTCTAGTT
GGGACCTCCTATGGCTTGTTTTATGTGTTGGATCACAACGGCAAAGTCAGGGAAAAGTTT
CCTCTTGAAATGGCTGAAATCCAAGGAGCAGTAGTTGCAGCTGATATCAATGATGATGGA
AAGATTGAACTAGTTACAACAGATTCACATGGAAATGTTGCTGCTTGGACTGCACAAGGT
ACAGAAATTTGGGAAACGCATCTCAAGAGCCTTGTTCCTCAGGGACCGGTCATTGGCGAT
GTGGATGGAGATGGCCATACGGATGTCGTTGTCCCAACACTTTCTGGGAATATATATGTT
CTGAATGGCAAGGACGGCTCATTTGTACGTCCATATCCTTATAGGACTCATGGTAGGGTG
ATGAATCGAGCACTTCTCGTCGACTTGAGCAAACGTGGGGAGAAGAAAAAAGGGCTTACA
ATTGTCACAATGTCATTTGATGGTTATTTGTATCTCATAGACGGACCAACATCATGTGCT
GATGTTGTAGATATTGGTGAAACTTCATACAGCATGGTCTTGGCTGATAATGTTGATGGT
GGCGATGATCTTGATCTTATTGTAACAACGATGAATGGTAACGTCTTCTGTTTCTCCACG
CCTGCCCCACATCATCCCCTCAAAACTTGGAGATCTCCTAATCAAGGGAGAAACAATGCT
GCTTACCGTAATGATCGTCAGGGGATCTATGCAACTCCGTCTTCAAGAGCTTTCCGTGAT
GAAGAGGGCAAGAGCTTTTGGGTTGAAATAGAGATTGTTGATAAATACAGATACCCATCT
GGGTCTCAAGCTCCTTATAATGTCACGGTGAGCTTGTTAGTTCCTGGTAATTACCAAGGA
GAACGAACTATTAAGCAAAATAAGATATTCGACCGTCCTGGAAAACATCAGCTTATGCTC
CCAACTGTTAATGTAAGGACTGCTGGGACTGTTTTGCTGGAGATGGTTGACAAGAACGGA
CTATATTTCTCAGATGATTTCTCTATAACATTCCATATGCATTATTATAAGCTATTGAAA
TGGATTCTCGTACTCCCTATGCTGGGAATGTTTGGTGTGCTTGTCATCCTTCGTCCACAG
GAGGCCATGCCACTACCATCATTTTCGCGGAACACTGATTTATGATGTTGCAGTCACCTA
TATTACAAATTTCCATCATGTTGAAGAAATGAAGCAAATCACTCCTTCTGGACCTTGAGC
GGAGAACTGACTTACTGATACCGGGTATGTTCAAACATGAAAATTTTCATTGTTCTGGGC
GGATGTTCTTGAACAATAGAGTTACTCGAGGAGGAAGTTCGTTGATCAGGCCAATCAAGT
CTGGTTTTGTGGGGGGTAATCTTAGAACGGATCATGTAAGGGACACTGCATTTTGTGAAG
TTGAATATTTCCTTCTCTCTGATCTCAGTACAAATGGCCGTGGACGCGGTTAATGTTACT
AATAGAGTAGATTGTAAGAAAATGTTCAGTATGTAAGGAGAAATTTACGATGTGATGCCG
GGAAGTAAACTCTTTTACTTGTTATTAGTTACAAGATGCACCTGTGTCAAAATATAATAT
GGAATACGGTAGTGACTGATTTATTAAAAGGGATATCATTTATACTGAATACCTATTTAT
TCCACATAAAAGGTAA