Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g084270.2.1
CDS Infomation

Importin subunit alpha (AHRD V3.3 *** K4D3L3_SOLLC)
Sequence

ATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCCCATCAAAGCTTCAGTTGGCAAT
GCTGCAGCACAGCGAAGACGGCAACATGCTGTTACAGTGGGGAAGGAAAGGAGAGAAGCC
CTGATGCGGACAAAGCGTCTATGCAGAGTTGGAGTTAGTGCTGATTTTGATGAGGCCTCT
ATGGATGATAGTGACATGATGATTGAAGAAGATCAAGCAATTTTGGAGGCCTTGACTTCG
GCAGCTGTGGAAGAATTAAAGCTTGATGTTGCCTACCAGGGTAAAGGGGCAACAGAGAAA
AGAGTGAATGCTCTTCGTGAGCTGAGACGCTTTCTCTCTAGGTCGGAATTCCCTCCTGTT
GAAGCTGCTCTACAGGCTGGAGTTATACCTCTTCTTATTCAGTGTCTTTCATTTGGCTCT
TCAGATGAACAGTTGCTTGAGGCTGCTTGGTGCCTAACTAATATTGCTGCTGGAAAACCC
GAGGAAACCAAAGCTTTGTTACCTGCATTACCATTGCTTGTGGTTCATCTAGGAGAGAAG
AGTTCCATACATGTCATGGAGCAGTGTGCATGGGCATTGGGAAATGTTGCTGGTGAAAGT
GAAGAGCTGAGAAATGTTCTCCTATTACAAGGAGCCTTACCAGCTCTTGCAAGGATGCTG
CTGCCTAACAAGAGGTCAACAGTAAGAACAGCTGCTTGGGCATTATCAAACCTAATCAAG
GGACCAGATCCTAGAGCTGCAACAGAGTTGATAAAAATTGATGGAATACCTGATAGAATT
GTTCGACATTTAAAGAAAGGGGATGATGAGTTGGCCACTGAAGTAGCATGGGTCGTTGTG
TATCTCACTGCCCTTTCAAATGTTGCAACTACAATACTGGCAAAGAGTGATCTCGTACAA
GTACTGGTAGAAATATTGGACATGTCAACTAGCCTGCAACTGCTTATCCCGGTGCTGCGG
AGCTTGGGAAATCTTGTGGCTGGTGAACCTCATATAACTAATTTTGTTCTTGTTGCGAGA
CATGCGCTAACAGGTGATGCCATTCAAGCATTAGTAAAGTGCTTAAAGAGTGAACACCGT
ATCTTGAATAAGGAAGCTGCATGGGTGCTATCTAATATAGCTGCTGGTTCAGTGGAGCAT
AAGCAGTTGATATATTCAAGTGAAGCTATGCCGCTTCTTTTAAATCTTCTTTCTAAAGCT
GCATTTGACATAAAAAAGGAGGTAGCGTATGTCCTGGGAAACATCTGTGTCGCCCCTACT
GAAGGTTCCGGAAGGCCAAATGTGATTCTTGACCACTTGGTCAATCTTGTTCGTGGGGGA
TGCCTAACTGGTTTTCTGGATTTGGTAAGATCTGCTGATGTTGAGGCAGCGAGATTGGGA
CTGCAATTCATTGAGCTGGTGTTGAGAGGAATGCCAAATGGAGAGGGTCCGAAGCTCGTT
GAAAGGGAAGATGGTATTGATGCAATGGAAAGATATCAATTTCATGAAAATGAAGAACTC
AGGAGCATGGCGAACGAGCTGGTTGATAGTTATTTCGGAGAAGAGTATGGGCTTGATGAG
TAA

Peptide Sequence

PEP ID

Solyc10g084270.2.1
PEP Infomation

Importin subunit alpha (AHRD V3.3 *** K4D3L3_SOLLC)
Sequence

MADEGLVSHKRDPIKASVGNAAAQRRRQHAVTVGKERREALMRTKRLCRVGVSADFDEAS
MDDSDMMIEEDQAILEALTSAAVEELKLDVAYQGKGATEKRVNALRELRRFLSRSEFPPV
EAALQAGVIPLLIQCLSFGSSDEQLLEAAWCLTNIAAGKPEETKALLPALPLLVVHLGEK
SSIHVMEQCAWALGNVAGESEELRNVLLLQGALPALARMLLPNKRSTVRTAAWALSNLIK
GPDPRAATELIKIDGIPDRIVRHLKKGDDELATEVAWVVVYLTALSNVATTILAKSDLVQ
VLVEILDMSTSLQLLIPVLRSLGNLVAGEPHITNFVLVARHALTGDAIQALVKCLKSEHR
ILNKEAAWVLSNIAAGSVEHKQLIYSSEAMPLLLNLLSKAAFDIKKEVAYVLGNICVAPT
EGSGRPNVILDHLVNLVRGGCLTGFLDLVRSADVEAARLGLQFIELVLRGMPNGEGPKLV
EREDGIDAMERYQFHENEELRSMANELVDSYFGEEYGLDE*

Transcript Sequence

Transcript ID

Solyc10g084270.2.1
Transcript Infomation

Importin subunit alpha (AHRD V3.3 *** K4D3L3_SOLLC)
Sequence

CGCACCCAACTATACCTAGCTGGAATTCAATTTTCCCAAAAATTCATCGTTAAATTGAGT
GCAAGATTTTTCATTTTCTTAAAAAAATCAAAGATTTTGCTACTTCAAGAACCCTATTTC
TCTTTTGATTCAAAGAAGTTATCATATTTTCTGCTATTGACGAAATCCCCCATTTGAAGA
GCTTCATTGGGTAATCAAAACTATGGCAGATGAAGGTTTGGTTTCTCATAAAAGAGACCC
CATCAAAGCTTCAGTTGGCAATGCTGCAGCACAGCGAAGACGGCAACATGCTGTTACAGT
GGGGAAGGAAAGGAGAGAAGCCCTGATGCGGACAAAGCGTCTATGCAGAGTTGGAGTTAG
TGCTGATTTTGATGAGGCCTCTATGGATGATAGTGACATGATGATTGAAGAAGATCAAGC
AATTTTGGAGGCCTTGACTTCGGCAGCTGTGGAAGAATTAAAGCTTGATGTTGCCTACCA
GGGTAAAGGGGCAACAGAGAAAAGAGTGAATGCTCTTCGTGAGCTGAGACGCTTTCTCTC
TAGGTCGGAATTCCCTCCTGTTGAAGCTGCTCTACAGGCTGGAGTTATACCTCTTCTTAT
TCAGTGTCTTTCATTTGGCTCTTCAGATGAACAGTTGCTTGAGGCTGCTTGGTGCCTAAC
TAATATTGCTGCTGGAAAACCCGAGGAAACCAAAGCTTTGTTACCTGCATTACCATTGCT
TGTGGTTCATCTAGGAGAGAAGAGTTCCATACATGTCATGGAGCAGTGTGCATGGGCATT
GGGAAATGTTGCTGGTGAAAGTGAAGAGCTGAGAAATGTTCTCCTATTACAAGGAGCCTT
ACCAGCTCTTGCAAGGATGCTGCTGCCTAACAAGAGGTCAACAGTAAGAACAGCTGCTTG
GGCATTATCAAACCTAATCAAGGGACCAGATCCTAGAGCTGCAACAGAGTTGATAAAAAT
TGATGGAATACCTGATAGAATTGTTCGACATTTAAAGAAAGGGGATGATGAGTTGGCCAC
TGAAGTAGCATGGGTCGTTGTGTATCTCACTGCCCTTTCAAATGTTGCAACTACAATACT
GGCAAAGAGTGATCTCGTACAAGTACTGGTAGAAATATTGGACATGTCAACTAGCCTGCA
ACTGCTTATCCCGGTGCTGCGGAGCTTGGGAAATCTTGTGGCTGGTGAACCTCATATAAC
TAATTTTGTTCTTGTTGCGAGACATGCGCTAACAGGTGATGCCATTCAAGCATTAGTAAA
GTGCTTAAAGAGTGAACACCGTATCTTGAATAAGGAAGCTGCATGGGTGCTATCTAATAT
AGCTGCTGGTTCAGTGGAGCATAAGCAGTTGATATATTCAAGTGAAGCTATGCCGCTTCT
TTTAAATCTTCTTTCTAAAGCTGCATTTGACATAAAAAAGGAGGTAGCGTATGTCCTGGG
AAACATCTGTGTCGCCCCTACTGAAGGTTCCGGAAGGCCAAATGTGATTCTTGACCACTT
GGTCAATCTTGTTCGTGGGGGATGCCTAACTGGTTTTCTGGATTTGGTAAGATCTGCTGA
TGTTGAGGCAGCGAGATTGGGACTGCAATTCATTGAGCTGGTGTTGAGAGGAATGCCAAA
TGGAGAGGGTCCGAAGCTCGTTGAAAGGGAAGATGGTATTGATGCAATGGAAAGATATCA
ATTTCATGAAAATGAAGAACTCAGGAGCATGGCGAACGAGCTGGTTGATAGTTATTTCGG
AGAAGAGTATGGGCTTGATGAGTAAGAACATGTCATGTGTCAACTGATTTGGTTCTCTAA
CTACTATGAAGCTTGTTGCTCAACAAGATGTGCATATATTAGATAAACAATTACATGGTT
TTATGCTATCTGAATTTGGATTATCAGGTTTTCCAGATGTAGTTGTATTAAATTAATAGT
TTGGGGTTTGGGGGTGGGGTGTGATCATGGATATAACAAGCTTCCAATGTTGTATTAGTA
TGTTTCTAACACCAAAATAATAGGATTTGCCAGTAGATGTCTTAAAGATTCAATGTGTTC
ATCCTATTTGTTCCTATCTTTCAATCCTCGAGTTTCAAATATAGTTTGTATAATATTCTC
AGGTTGTGTTTAAGTCGTTAACTCTTGTACGTATTTATAGTCGTGTTTAAGTCG