Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g084210.2.1
CDS Infomation

Syntaxin, putative (AHRD V3.3 *** B9S0N2_RICCO)
Sequence

ATGAAGTGTTGTTTTTTCCATCTGCAAAGTAAAATTCCTCTTCCGTACTATTTCTTGATC
GGAGAAAACTGCAATCTTCACAGAGGTTGAAGAAGAAGAAGAAGAATGAGTGTAATTGAT
ATTCTCACAAGGGTAGACTCGATCTGTAAGAAATACGACAAGTACGACATCGACAAGCAG
AAGGATTCCAACGTTGCCGGCGACGATGCCTTCGCACGTCTCTATTCTTCTGTTGAATCC
GACATAGAAACTGCTCTTCAGAAAGCGGAGACAGCTTCTATTGAGAAAAATAGGGCATCT
ATTGTGGCGATCAATGCTGAGATTCGGAGGACTAAAGCGAGGTTACTTGAAGAGGTTCCG
AAATTGCAGAGATTGGCTGTGAGAAAGGTCAAAGGTCTTTCGGGTGAAGAACTTGCTGCC
CGCAATGATTTGGTTCTTGCACTGCCAGATAGAATAAATGCCATACCAGATGGCTCTGCA
GCTCCACCCAAACAATCTGGAGGATGGAGAGCTTCAGGTTCTCGCACGGAAATTAAATTT
GATTCAGATGGACAATTTGACAATGAATATTTCCAACAAACTGAAGAGTCAAGTCAATTC
AGGCAAGAGTATGAAATGCGAAAAATGAGACAGGACCAAGGTTTGGATGTCATAGCAGAA
GGATTGGATACTTTGAAGAACATGGCCAGCGATATGAACGAGGAGTTGGATAGACAAGTT
CCTCTGATGGATGAGATTGACGCCAAGGTGGACAGGGCTACCGCGGACTTGAAGAATACC
AACGTTAGGCTTAAGCATACAGTTAACCAGCTGAGATCTAGTCGCAACTTTTGCATCGAC
ATCATCTTGTTGTGCATCATTCTTGGAATTGCAGCATATTTGTACAATGTCTTGAAGAAG
TAA

Peptide Sequence

PEP ID

Solyc10g084210.2.1
PEP Infomation

Syntaxin, putative (AHRD V3.3 *** B9S0N2_RICCO)
Sequence

MKCCFFHLQSKIPLPYYFLIGENCNLHRG*RRRRRMSVIDILTRVDSICKKYDKYDIDKQ
KDSNVAGDDAFARLYSSVESDIETALQKAETASIEKNRASIVAINAEIRRTKARLLEEVP
KLQRLAVRKVKGLSGEELAARNDLVLALPDRINAIPDGSAAPPKQSGGWRASGSRTEIKF
DSDGQFDNEYFQQTEESSQFRQEYEMRKMRQDQGLDVIAEGLDTLKNMASDMNEELDRQV
PLMDEIDAKVDRATADLKNTNVRLKHTVNQLRSSRNFCIDIILLCIILGIAAYLYNVLKK
*

Transcript Sequence

Transcript ID

Solyc10g084210.2.1
Transcript Infomation

Syntaxin, putative (AHRD V3.3 *** B9S0N2_RICCO)
Sequence

ATAAGATTGAGGCTAACTCATAATCAGATATGGTCGAGTCCAAAAATTAACTTACAAATA
AGAATTTTGATGAAAGCATCGATCTGCCAAGGACAAAAAAACAAAAGCTAAAAAAAGCAA
CTAAACAAAACAAAAATATGAATTGATAAAAGATACGAGTAATTGACTAATACAATGATC
AATCACGACGGATATAAAATGCATCTATGATTTGATCAGTGATTCAGATGAATATCAATC
ACAATGCAATATAACACTTACGTAATTTTGTGAGGAGAAGGCAATGAAAATAAATAAGCA
TTTTTTCCTTTTCTTTTTTCTGAAAAGATCCAAACATGTACAAATCTTGAAATTCATCGC
TGGAGATACAGTTCAACTCATAGCAATGAAATAAAAGTAGGAGGAAAATACCTCTTATCT
ATGTTTGTTTAACCCCGTACTTCCCTAGTTTTGCCAACAAAGATTTCTTCTACCCTCCTG
CATGATCTCAAACGCAAGTTTATATCTTTCTAAAGATGCTGTTCCTGCCTCAATGTAATT
CTTTGCTTCTTCTCTTAAGCTCCACAACATCAATGCCTTATGATCTTGAGAAGCACCCCC
TGAATCGACATCACGTAGTATACCATATTTTGCATCCTTTGTCCAACGATGTAGGATATA
GCGAGATGGAAGCTCCCTTATGTTCATTATCTGAAAAACTTTCAAGGCATGTCTACACAG
CACACCTTCAAACTCAAACATTTTACAACTGCAACTGATGTTAAGATTGGAGGCATTGAA
GGCAACTGTATGCCTCTCATCTCCATTTCCACACTTCTGCACCAGATACCTACTAATGGC
ACCTTCAACATTTATCTTAATTCCAACATAACTATAGCACTCCAAAAGCTCTTTCTGGAA
CACTTTGAACATGGTAATAGTGTAAAGCCTTCTACACTGGTCCTCTATAGGGTCCTTTGT
GTGCAGAACTGCTTGCAAATTGAATGAGTTAAAATCCTCTTTTCTTTCCTCTTCACGACG
TTGCTCAAGGGATTTTTCGTACCGTATAAGAAATTCACTAAGTGGTGCTTGAGATGTCAA
TAATGTGCCAAAATATGATTTCAAGCTCCCGTCCGTTGGAATGCCAGCAAAGAATGTGCC
TTTAATGTATAACGGTACCCAGCTCTTCCGCATCCTATACATATCCTTCAACCATGTGTT
CTCTCTCAAATTATACTTGTTAATAAGCACATTCCATGCTGCTTCAAACTCATTAGCCGT
CTGGCTCTGGAAAATGGAAGTTTCATATTCATACTTAAATTCAGGATTCATCGAGAGTAA
TGCACCAATGTTTTCCTGCTCCTTAGCCACAACTTGCCATGCAGAAAACCGATGATGTGT
CCCGGGGAAAACTTGAGCAATTGAATGTTGAATGACCCAGTCTTGATCAGCAACTATAGA
GATAGGACGACGCCCTGACATTGCCCGAAGCCAAGCTTGGAACAACCAAGTAAATGACTC
TTCAGACTCTTCAGCAATTAAGGCACAGCCAAGAAGTACTGGTTGCCTGTGGTGATTAAC
CCCAATGAATGAAGCAAGTGGCACTGAGTAACTACCCCTTCTATAGGTTGTGTCGAAAAC
AATTGCATCCCCAAACTGAGTGCAGGAGAATCTAGACCGAGAGTCGGCCCATAATACACT
CATGGCTCTACCCTTATGCATTTCCACTGCATAGAAAAATCCCATATCGTCTGCTTGTCG
AGCCTGAAAATAGTCAAAAAGCTCATTATACCAATCACTTCCAATTTTACTCTCCCTGGA
TCTTGTAACAAGGCTAAACCCTCCATTTGATTCAACTAAATCCATATTCTCCAACCCATG
GCTTAATTCTTCTTTGAATCCTTTTGATGACACTCTCTCACTAGCATCAATGGGAGCTCC
AAGTTCATGGTTATGTTCGTTTTGAAAACGATCAACCAACCACCTTCCTGATTCTTGTCT
CTGTATCCTCATGAAAGCTCCACACCCCACTCTCGACGGATGCTGATGCCCTTCTTTAGA
GCAAACAAATCTCCGCGATGTAATCGACCCATCATTCTTCGAACGAAACAGCTGACCAAT
CCTAACTTTAAACCCAGTATTAGCAGCATGAGTATGATAAAACTCATATGCTTCAGCAGC
AGAAACAAATTCTAACCCCTTATACGGTTCACTTCTAGTTTCTCCATTGATTTTCTCCCG
TTTAAGACGCTTAAAATCGAGAATCCCAGATGGGCCATCCTCATCAAGTGATCTAAGTCC
AGTCCTAGTTGATACAACAATAGAAGCTGATTTTGATTTCGGGGTTGGGGTTGGGGTAAC
AATTTTTCTTTGAATTCGAGATGGGCAAATCTCACCTGGATGTTCAAGGTCATGATTGTG
TTCCTTCTTTATATTAGCGAGAACCCATTTGCCAGAATCAAGCCTTTGCACTCTTATGAA
AGCTGGACATCCCGTTCGTGAAGTAGTCTGAAACCCCTCTTTGGAACAAACGAATCTCCG
GGAAACAACAGACCCATCAATTCGAGAACGATAGAGCTGACCAATTCGAATCCTAAATCC
AATTTTCGTTGCATAGAGATTGTAAAACTCTTGTGCATCTTCGGCTGAATCGAACTCTAA
CCCCACATTTGGTTCAAGCCTTGACTCTCCTTCTTCCTCAACATCCCGATGGTGGCCATT
ATTCTTCACAATAGTAGCTATAGCTAATCCTCCTACTGGTTTTGCTCTAACAGTCATCGT
AGTAACTATCTCTTCTCTACTCATATCAGTATCTATTGCATATCAATTTCACGGCCGGCG
GCGGCGGCAGAAAGATTTGGACTTTGGATAGAGGGGTTTTTTGTCCTCTGAAAAATGGTG
TCGCAATCGGTTCACTTTGTCTTCTATGTACTTTTTTTTTTACACTCCATGCTGGTCTTT
TAATATATATATATATATATATATATATATATATATATATATATACGAACTATCGAAAAT
GATATAGCTATATATATATAATTATTGGGATTGAATCTTTGTCATTCGATCATTTTATGA
TTTATTCAATAATTCACTTAATTTTAATTAAAAGAAAATTACTCGAATTTTAAAAAAAAA
TTATATCTAACTCACTCATTAACGCCCTAATAATACACTCAAATCAAAACTTCTTATTCA
TTTCTCCTTCAAACTGAACAGCTACTTCGATAATATTGATAAAGTGATGATAAAAAATAT
GTTTATGAAAAGAATTTTGTGTCGTGCGAAAAGTATGATCCATTTTATTTTTGAAATCAT
CATGTAGGAGTTTTTGAGCTATTTGTTTGAAATCGTCGAGTGTTTTTTAATGAGAGTATA
TAAATTATATCATTTTTGACAATTCGAAGAATATTGTCTTTAAAAATTATCACAAAATTG
AATTAGTGTAGTAGGCAATATTTTATAAGGAAGGCTAGACATCAATTTTTCATGTCAATG
TCTTCTTGTCGAGTTTATTACACTAAACTTGTTTAATATGAATTTACATTTTATTTATAA
TTTATGAGTTATGCACATAAGAGCGAATTATATTTCATGTGTAATTACTAGTTATATGTA
CAAGAGTGATTGTCATTGCTAATAACCATCATTAACCATTATCACCACTAACTACTATCT
ATATACATCCCGATAAATTATTAATCATCATCACCTTCAATTCTTCGTAAATTGCCACGA
TAACTTTCATTATTATTAGCAATCACAACCACCAACCATCGTATACAAAAATACATTTGT
TTTTGTTTTTATTAATAAAGTACTAAAAATAGTTGTATTTTATTTAAATTCTACATTTTA
AAAATATTAACACTATAGAAATTAATTTGAATACTATTTGTTCCTTTAAATAATAATTAA
AAAACCCAAAAAAAACCTGTAATAATTTTTTTTTTCAAAATCTCCAGTCTGTATTATGAA
GTGTTGTTTTTTCCATCTGCAAAGTAAAATTCCTCTTCCGTACTATTTCTTGATCGGAGA
AAACTGCAATCTTCACAGAGGTTGAAGAAGAAGAAGAAGAATGAGTGTAATTGATATTCT
CACAAGGGTAGACTCGATCTGTAAGAAATACGACAAGTACGACATCGACAAGCAGAAGGA
TTCCAACGTTGCCGGCGACGATGCCTTCGCACGTCTCTATTCTTCTGTTGAATCCGACAT
AGAAACTGCTCTTCAGAAAGCGGAGACAGCTTCTATTGAGAAAAATAGGGCATCTATTGT
GGCGATCAATGCTGAGATTCGGAGGACTAAAGCGAGGTTACTTGAAGAGGTTCCGAAATT
GCAGAGATTGGCTGTGAGAAAGGTCAAAGGTCTTTCGGGTGAAGAACTTGCTGCCCGCAA
TGATTTGGTTCTTGCACTGCCAGATAGAATAAATGCCATACCAGATGGCTCTGCAGCTCC
ACCCAAACAATCTGGAGGATGGAGAGCTTCAGGTTCTCGCACGGAAATTAAATTTGATTC
AGATGGACAATTTGACAATGAATATTTCCAACAAACTGAAGAGTCAAGTCAATTCAGGCA
AGAGTATGAAATGCGAAAAATGAGACAGGACCAAGGTTTGGATGTCATAGCAGAAGGATT
GGATACTTTGAAGAACATGGCCAGCGATATGAACGAGGAGTTGGATAGACAAGTTCCTCT
GATGGATGAGATTGACGCCAAGGTGGACAGGGCTACCGCGGACTTGAAGAATACCAACGT
TAGGCTTAAGCATACAGTTAACCAGCTGAGATCTAGTCGCAACTTTTGCATCGACATCAT
CTTGTTGTGCATCATTCTTGGAATTGCAGCATATTTGTACAATGTCTTGAAGAAGTAAAA
CTCCGCTAAAGTACCTGTTGGATCGACTTCTATGTTGGCCTTCATGATTCATTTCTGTTT
TTTTTGGGTGTGTGTATGCACGTATAACAAGTTATTATCGGTGGTTAAGCCTAGCATTTG
TTTTCTACTTGCTTGTGTGTTTTACTAGTTTGAGATTGAGACGAAGTTATCGTTGTTTTC
TATCTTCAGACAACGAATTTTCTGGTTTCTACCCAATGTTAATGTACACATATTTTAACC
ATACCTTTATATATGTCACTATTTGACTCTTCAAAGCAAAGTAGACTTTATTCCTATCTT
TTTTGGGTGAAAAAGTTAATTTTCAATGGATTATCAACTTAAGAAAAATAATGATTTGCA
ACATGTTTGTACCAAACAACCTTTTTGCTAGAGAACTATATTAAAAGCTTACAAATATTT
AAGGACGGTGAATAGAAATTTAACTAATATTCAAAATAAAATATTTAATCCTATTGTTAG
TTTAAAAAAACAAATGTGGTCTGTCCATTTAGAAAAATATCTGGCCCGTC