Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g084160.2.1
CDS Infomation

Small RNA degrading nuclease (AHRD V3.3 *** A0A072VF22_MEDTR)
Sequence

ATGGAATCGAAACTTGAATCAGCCAAGAAAGAGGTTCTTGCTGAAATTGTGAAGTTGGCT
CAAAAGCGGGAGATGAAGGGAAGTAAAGGAGGGTGGAAAGATTTTTTGAGATCATACGAC
AAGAAGCTTGGGGTTAGCTTGAGTGACCCATCCAAGAGGTCCATTGATGTGCTGCTGGCA
TTTTTAAAGACGTTTAGTGAAGATGACTTAAAGTTTTTTGATAAGGTGTTTCAATGTCAT
TCAAACCGTGACGCTGTTGAGAAGCTCCAGAAAAGTTCCCCGGACAGCGAATCCCCTGAA
CAGAGACTCGTTCGCTTAACTTTTGAGCACCCTCAATATCCAATAGACTACTCATTTCCA
TCACACGAGGAGGATTGGTTAGTCACCAAAAGGAGTAAAAAATCTAATTTCATTCAATCA
AAGGACATGGTTGCAATCGATTGTGAAATGGTCCTTTGCCAAGATGGCACTGAAGCTTTA
GTCAGAATCTGTGCTGTGGACCGTAATTTAGAGGTTAAACTCAATGAATTTGTGAATCCC
AACAAACCAGTTGTAGATTACAGAACTGACATTACTGGTATAACTGCTGGAGATTTAGAA
GGAGTTTCTTGTTCATTGGCTAATGTACAGACATCCCTGAAGAAGCTATTATCACATGGA
ACCATATTGGTTGGTCATAGTTTACACAATGATCTTCGTGCTTTGAAGATGGATCATGCA
AGAGTGATTGACACATCATATGTATTCAAATATCAGGGTCAAGCTTTTAGTAGAAGACCT
TCTTTAAGCAACTTGTGTAAGTCTGTTTTAGGGTTTGACCTTCGAAAGATAGGCTCTCCA
CATAATTGTCTAGATGATGCGATTACTGCAATGAAACTTGTTCTTGCCAAGCTTGAATGT
GGAGGTGATAATATCATACCATTGGTTTGTGAGGAGGCGCAGGAGCCCGCGATGTCAAAG
CTACTTGTCCACAGAATACCTGCGGCTGTTCATAGTCAAGAGTTGCACAAAGTTATTCCT
GGCGACTTTACTGTGGAAGTTAAGGCTAATAAAAAAGGGCAAGCAGACAAGTATTCTGCT
TTGATCAACTTCAAAACTCAGCACGAGGCGAATGAGGCATTCGATAAACTTGAAGGCAAC
CAAGAGAAGGATATTGGTGGACGACCACAGAAGCTCGTTTCATTTCATCTTGATTCTGGT
GTATTAGGGTCTTGTTATGTTCGTAAGATGGATGCCAATAATGATTCTAAAGATAAAGAG
GTCACGCCAAAGAAGAGGTCACTTGAAGATGAAGAGGCCATTGTAGAGTCAAAGAAACCA
AAAACAGAAGACCAATGTAAAGAACTCAAGAAGGCTGCTGGTGCAGGTTGTAATCAGTGT
GAAACTCATTCGATGGAGATTGAGAAACTAAAGAAAGATTTAGCCCACAGAGACGAAGAG
ATCTCCGCGTTGAACAAAATCATCGTTAACCTTGTGAGGAAACAAGGATTTTAA

Peptide Sequence

PEP ID

Solyc10g084160.2.1
PEP Infomation

Small RNA degrading nuclease (AHRD V3.3 *** A0A072VF22_MEDTR)
Sequence

MESKLESAKKEVLAEIVKLAQKREMKGSKGGWKDFLRSYDKKLGVSLSDPSKRSIDVLLA
FLKTFSEDDLKFFDKVFQCHSNRDAVEKLQKSSPDSESPEQRLVRLTFEHPQYPIDYSFP
SHEEDWLVTKRSKKSNFIQSKDMVAIDCEMVLCQDGTEALVRICAVDRNLEVKLNEFVNP
NKPVVDYRTDITGITAGDLEGVSCSLANVQTSLKKLLSHGTILVGHSLHNDLRALKMDHA
RVIDTSYVFKYQGQAFSRRPSLSNLCKSVLGFDLRKIGSPHNCLDDAITAMKLVLAKLEC
GGDNIIPLVCEEAQEPAMSKLLVHRIPAAVHSQELHKVIPGDFTVEVKANKKGQADKYSA
LINFKTQHEANEAFDKLEGNQEKDIGGRPQKLVSFHLDSGVLGSCYVRKMDANNDSKDKE
VTPKKRSLEDEEAIVESKKPKTEDQCKELKKAAGAGCNQCETHSMEIEKLKKDLAHRDEE
ISALNKIIVNLVRKQGF*

Transcript Sequence

Transcript ID

Solyc10g084160.2.1
Transcript Infomation

Small RNA degrading nuclease (AHRD V3.3 *** A0A072VF22_MEDTR)
Sequence

ATAAACAATGGTTAGGGGTTTTAAATCAACCTTTTTAGGTCTCCACCATGGCTAATCCTA
AAACCCCCAATCCATAAACCCTAGAATTACTTCTATTCCACCAGCTCCTTCCTTGTTACT
CTAAAGTTTATCAATTTTTCTCTGCAAGATCTCAACTTTTATTCAATTTTCAATGGAATC
GAAACTTGAATCAGCCAAGAAAGAGGTTCTTGCTGAAATTGTGAAGTTGGCTCAAAAGCG
GGAGATGAAGGGAAGTAAAGGAGGGTGGAAAGATTTTTTGAGATCATACGACAAGAAGCT
TGGGGTTAGCTTGAGTGACCCATCCAAGAGGTCCATTGATGTGCTGCTGGCATTTTTAAA
GACGTTTAGTGAAGATGACTTAAAGTTTTTTGATAAGGTGTTTCAATGTCATTCAAACCG
TGACGCTGTTGAGAAGCTCCAGAAAAGTTCCCCGGACAGCGAATCCCCTGAACAGAGACT
CGTTCGCTTAACTTTTGAGCACCCTCAATATCCAATAGACTACTCATTTCCATCACACGA
GGAGGATTGGTTAGTCACCAAAAGGAGTAAAAAATCTAATTTCATTCAATCAAAGGACAT
GGTTGCAATCGATTGTGAAATGGTCCTTTGCCAAGATGGCACTGAAGCTTTAGTCAGAAT
CTGTGCTGTGGACCGTAATTTAGAGGTTAAACTCAATGAATTTGTGAATCCCAACAAACC
AGTTGTAGATTACAGAACTGACATTACTGGTATAACTGCTGGAGATTTAGAAGGAGTTTC
TTGTTCATTGGCTAATGTACAGACATCCCTGAAGAAGCTATTATCACATGGAACCATATT
GGTTGGTCATAGTTTACACAATGATCTTCGTGCTTTGAAGATGGATCATGCAAGAGTGAT
TGACACATCATATGTATTCAAATATCAGGGTCAAGCTTTTAGTAGAAGACCTTCTTTAAG
CAACTTGTGTAAGTCTGTTTTAGGGTTTGACCTTCGAAAGATAGGCTCTCCACATAATTG
TCTAGATGATGCGATTACTGCAATGAAACTTGTTCTTGCCAAGCTTGAATGTGGAGGTGA
TAATATCATACCATTGGTTTGTGAGGAGGCGCAGGAGCCCGCGATGTCAAAGCTACTTGT
CCACAGAATACCTGCGGCTGTTCATAGTCAAGAGTTGCACAAAGTTATTCCTGGCGACTT
TACTGTGGAAGTTAAGGCTAATAAAAAAGGGCAAGCAGACAAGTATTCTGCTTTGATCAA
CTTCAAAACTCAGCACGAGGCGAATGAGGCATTCGATAAACTTGAAGGCAACCAAGAGAA
GGATATTGGTGGACGACCACAGAAGCTCGTTTCATTTCATCTTGATTCTGGTGTATTAGG
GTCTTGTTATGTTCGTAAGATGGATGCCAATAATGATTCTAAAGATAAAGAGGTCACGCC
AAAGAAGAGGTCACTTGAAGATGAAGAGGCCATTGTAGAGTCAAAGAAACCAAAAACAGA
AGACCAATGTAAAGAACTCAAGAAGGCTGCTGGTGCAGGTTGTAATCAGTGTGAAACTCA
TTCGATGGAGATTGAGAAACTAAAGAAAGATTTAGCCCACAGAGACGAAGAGATCTCCGC
GTTGAACAAAATCATCGTTAACCTTGTGAGGAAACAAGGATTTTAA