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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g083930.2.1
CDS Infomation

Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** K4D3H9_SOLLC)
Sequence

ATGGCAAGGATAAAACCTCAAGCTCTTCTACTGCAAAGCAAAAAGAAGAAGGCGCCAAGT
GGTGTTAGTGTACCTACAATTATTGTATACATCCTAATTGTTGCTGTCATGGTGTTTTCC
CTGTTCTCTACATATAAATACTGGTCTCGAAGATCAATTCTTCAGACACAGGATGGTATA
TCAAACAGAAAGTTTATTGAGCGGAAGAAATCAGATATTCCTAATTACGCTCTTATAAGC
ACCTCGAAAGGACAGATAACTGTGGAACTTTACAAGGATGGTTCTCCTGACATTGTCAAT
GAGTTCATTGATTTCAGCCAGAAAGGTCACTTCAAAGGGATGCAATTTACTCGTGTAGTA
AAGAACTTTGTCATTCAAGGTAGTAAAATTGAAAACTCTGAAGCTACAGAAGATTGGACA
TCGAGGGGAAAACATTACAGCCAACTAAACACAAGTCTTAAGCATGAAGCATTTATGCTT
GGTACTTCCAAAGCGACACATGAAGGTGGAGGATTTGATCTATTTATTACAACTGCACCA
ATACCAGATTTGAATGACAAGATTAATATCTTTGGGCGTGTCATCAAGGGAGAAGATGTC
GTGCAGGAAATCGAAGAAGTAGATACAGATGACCACTATCGACCCAAAACTCCTGTACAA
ATCAATGAAGTAACTCTCAAGCACAAAACCTGA

Peptide Sequence

PEP ID

Solyc10g083930.2.1
PEP Infomation

Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** K4D3H9_SOLLC)
Sequence

MARIKPQALLLQSKKKKAPSGVSVPTIIVYILIVAVMVFSLFSTYKYWSRRSILQTQDGI
SNRKFIERKKSDIPNYALISTSKGQITVELYKDGSPDIVNEFIDFSQKGHFKGMQFTRVV
KNFVIQGSKIENSEATEDWTSRGKHYSQLNTSLKHEAFMLGTSKATHEGGGFDLFITTAP
IPDLNDKINIFGRVIKGEDVVQEIEEVDTDDHYRPKTPVQINEVTLKHKT*

Transcript Sequence

Transcript ID

Solyc10g083930.2.1
Transcript Infomation

Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** K4D3H9_SOLLC)
Sequence

AAAATAAAATAAAATTGTGGTAAATAAATTATAAAACTTGTTGAGAAGGGTACTATATAA
ACTTTTGAATATTTTTACCAACTGCCTTCTTCTTCCCTAAAATTTCACGCTAAATACAAA
AATCACAGCGAAAATTCAAAGAGAAATAATCAATCCAGCGCAATCAATTCAGGGAATTAA
TACTAGGGAGTTTTAAATTTTAAGTGTCATGGCAAGGATAAAACCTCAAGCTCTTCTACT
GCAAAGCAAAAAGAAGAAGGCGCCAAGTGGTGTTAGTGTACCTACAATTATTGTATACAT
CCTAATTGTTGCTGTCATGGTGTTTTCCCTGTTCTCTACATATAAATACTGGTCTCGAAG
ATCAATTCTTCAGACACAGGATGGTATATCAAACAGAAAGTTTATTGAGCGGAAGAAATC
AGATATTCCTAATTACGCTCTTATAAGCACCTCGAAAGGACAGATAACTGTGGAACTTTA
CAAGGATGGTTCTCCTGACATTGTCAATGAGTTCATTGATTTCAGCCAGAAAGGTCACTT
CAAAGGGATGCAATTTACTCGTGTAGTAAAGAACTTTGTCATTCAAGGTAGTAAAATTGA
AAACTCTGAAGCTACAGAAGATTGGACATCGAGGGGAAAACATTACAGCCAACTAAACAC
AAGTCTTAAGCATGAAGCATTTATGCTTGGTACTTCCAAAGCGACACATGAAGGTGGAGG
ATTTGATCTATTTATTACAACTGCACCAATACCAGATTTGAATGACAAGATTAATATCTT
TGGGCGTGTCATCAAGGGAGAAGATGTCGTGCAGGAAATCGAAGAAGTAGATACAGATGA
CCACTATCGACCCAAAACTCCTGTACAAATCAATGAAGTAACTCTCAAGCACAAAACCTG
AACTGTCTATCTATGAGATGCACTTACTTGACATCGATGAACATAAGCAGGCATCATCAT
AAGTAGAGTTGCTAACTGTGGGTTTGATGTAAGATATGGATTTCATTTGTGTAATTTGGC
TAGGCTCCTCCCCAAAATTTTGTGTTAAATAACCAAGCCATTTGTAAGAACTACGTTGGT
AAAAAAAAAGTAGTTTTTGGGAATGTGGATCATTCTTGGACACTATTGAAAACACCTTTA
AATTTAATCCATAATTATATCATCCTTTAATTCGATTGACGTGGCCTATTAAAAGACAAA
CACA