Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g083920.2.1
CDS Infomation

Serine/threonine protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** B9IFU5_POPTR)
Sequence

ATGTTGAAAAATATCATAAAGCGAGGGCATAAAAAGGTGCTTAAATCAGAAGTATCTGAT
TTTGGTCACGCGCCGCCGGCGGGAGGAAGGAATTCCGGCAATGTTTCGACGTCTGATGTG
GTGGTGAATCATGCTTCGAGAGGAAACATGGTAACGAATTCGATTCAATCACAACAGACA
CCTTCAGTGATGACATCTGCAGCTCCAGCATCGGGTAACATTGAGAACCTTCCCTTGTTT
CGTGATGTGCAGATATCCGAACGTCAAGTGTTGTTTTTTAGGAAACTACAGATTTGTTGT
TTTCAGTTTGATTTTACTGATACCATGAAATTGGTAAGGGAGAAAGAGATAAAGAGACAT
ACACTTGTGGAGCTTGTAGATTATGTTCAATCTGGTGCTGGGAAAATCAGTGAAAGTAAT
CAAGAAGAAATGGTAAAGATGATATCAGTGAATATATTTCGTTGTTTACCTCCGGCATCT
CATGAGAATACAGGATCCGAAAATGTGGAACAGGAAGAGGATGAGCCATGTCTCGAGCCA
TCTTGGCCTCATTTACAGCTTGTGTATGAATTGCTGTTGAGGTATGTGGTTTCATCAGAT
ACTGACACAAAGTTAGCTAAACGCTTTATTGATCACTCATTTGTATTGAAGTTATTGGAT
TTGTTTGATTCCGAGGACCCAAGGGAAAGAGAGTATTTGAAAACAATTCTTCACCGCGTA
TATGGGAAGTTTATGGTGCATAGACCATTTATAAGGAAGGGAATCAATAACATCTTTTAT
AGGTTTATTTATGAGACAGAAAGGCACAGTGGGATAGGTGAGTTACTAGAGATTCTAGGG
AGTATTATAAATGGTTTTGCATTACCCATGAAAGAGGAACACAAGTTATTCCTTGTTCGG
GCACTCATACCACTGCACAAGCCGAAATCAGTTGCAATGTATCATCAGCAGTTATCCTAC
TGTATTGTTCAGTTTGTTGAAAAGGATTATAAGTTGTCTGATACGGTTATAAGGGGTTTG
TTGAAATACTGGCCTGTCACTAATTGCCAAAAAGAAGTCCTCTTTCTTCAGGAGCTTGAA
GAAGTGTTGGAGACCACACAGGCAGCAGAATTTCAGCGTTGCATGGTTCCTCTTTTTAGA
CAGATTGCTCGTTGCCTTAACAGCCCACACTTCCAGGTAGCAGAACGAGCCCTATTTCTA
TGGAACAATGAGCACATAGTGGGATTGATCGCCCAGAACCGCAATGTCATTTTCCCGATC
ATTTTTGATGCTCTGCAAAAGAACATAGATAATCATTGGAATCAGGCTATCCATGGGCTG
ACTGTAAATGTTCGCAAAATGTTCATGGAAATGGATGCTGATCTGTTTGATGAGTGCCAA
AGACAGTATTCTGAGAAAGCAGCCCGGGCCACTGAACTGGAAGAGCAGCGAGAACTAAGA
TGGCAGAGATTAGCGGCAGCTGCAACACAAGGACGTTAA

Peptide Sequence

PEP ID

Solyc10g083920.2.1
PEP Infomation

Serine/threonine protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** B9IFU5_POPTR)
Sequence

MLKNIIKRGHKKVLKSEVSDFGHAPPAGGRNSGNVSTSDVVVNHASRGNMVTNSIQSQQT
PSVMTSAAPASGNIENLPLFRDVQISERQVLFFRKLQICCFQFDFTDTMKLVREKEIKRH
TLVELVDYVQSGAGKISESNQEEMVKMISVNIFRCLPPASHENTGSENVEQEEDEPCLEP
SWPHLQLVYELLLRYVVSSDTDTKLAKRFIDHSFVLKLLDLFDSEDPREREYLKTILHRV
YGKFMVHRPFIRKGINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVR
ALIPLHKPKSVAMYHQQLSYCIVQFVEKDYKLSDTVIRGLLKYWPVTNCQKEVLFLQELE
EVLETTQAAEFQRCMVPLFRQIARCLNSPHFQVAERALFLWNNEHIVGLIAQNRNVIFPI
IFDALQKNIDNHWNQAIHGLTVNVRKMFMEMDADLFDECQRQYSEKAARATELEEQRELR
WQRLAAAATQGR*

Transcript Sequence

Transcript ID

Solyc10g083920.2.1
Transcript Infomation

Serine/threonine protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** B9IFU5_POPTR)
Sequence

AGCGTCCCTTCAATTTTTAATTATCCCATTTTCGTCACTTTCTCTTTCTATTTTCTTCTA
CTGCAATTTTACTTTTTCTCCCCACCATTATCTCAATTGATCGCCGGAAAATTCTCCTCA
CTCCGATCATTTTCCCGTACTCCGGCGGTCATGGATCGCCGTCACTACACACTAATTGGA
AGTTCTCGACGGTGATGTTTCTCATCTCCGGTTATAGATTTCATTTCATGTATGGTAAAA
TCAGGTACTTGTGAACTATACATTGCAATTATTAAAAGCTTTTTTATCTTCTCGATCTCT
GTTTGCTGATGGAAAGTTTCTGTTTTTTAGTTGAGGTTTTTTGATATCTATAGGTAGGTA
AAAGTAATAGTTAGGGTTTTTGTATTGATTGGAAGGGATAATGTTGAAAAATATCATAAA
GCGAGGGCATAAAAAGGTGCTTAAATCAGAAGTATCTGATTTTGGTCACGCGCCGCCGGC
GGGAGGAAGGAATTCCGGCAATGTTTCGACGTCTGATGTGGTGGTGAATCATGCTTCGAG
AGGAAACATGGTAACGAATTCGATTCAATCACAACAGACACCTTCAGTGATGACATCTGC
AGCTCCAGCATCGGGTAACATTGAGAACCTTCCCTTGTTTCGTGATGTGCAGATATCCGA
ACGTCAAGTGTTGTTTTTTAGGAAACTACAGATTTGTTGTTTTCAGTTTGATTTTACTGA
TACCATGAAATTGGTAAGGGAGAAAGAGATAAAGAGACATACACTTGTGGAGCTTGTAGA
TTATGTTCAATCTGGTGCTGGGAAAATCAGTGAAAGTAATCAAGAAGAAATGGTAAAGAT
GATATCAGTGAATATATTTCGTTGTTTACCTCCGGCATCTCATGAGAATACAGGATCCGA
AAATGTGGAACAGGAAGAGGATGAGCCATGTCTCGAGCCATCTTGGCCTCATTTACAGCT
TGTGTATGAATTGCTGTTGAGGTATGTGGTTTCATCAGATACTGACACAAAGTTAGCTAA
ACGCTTTATTGATCACTCATTTGTATTGAAGTTATTGGATTTGTTTGATTCCGAGGACCC
AAGGGAAAGAGAGTATTTGAAAACAATTCTTCACCGCGTATATGGGAAGTTTATGGTGCA
TAGACCATTTATAAGGAAGGGAATCAATAACATCTTTTATAGGTTTATTTATGAGACAGA
AAGGCACAGTGGGATAGGTGAGTTACTAGAGATTCTAGGGAGTATTATAAATGGTTTTGC
ATTACCCATGAAAGAGGAACACAAGTTATTCCTTGTTCGGGCACTCATACCACTGCACAA
GCCGAAATCAGTTGCAATGTATCATCAGCAGTTATCCTACTGTATTGTTCAGTTTGTTGA
AAAGGATTATAAGTTGTCTGATACGGTTATAAGGGGTTTGTTGAAATACTGGCCTGTCAC
TAATTGCCAAAAAGAAGTCCTCTTTCTTCAGGAGCTTGAAGAAGTGTTGGAGACCACACA
GGCAGCAGAATTTCAGCGTTGCATGGTTCCTCTTTTTAGACAGATTGCTCGTTGCCTTAA
CAGCCCACACTTCCAGGTAGCAGAACGAGCCCTATTTCTATGGAACAATGAGCACATAGT
GGGATTGATCGCCCAGAACCGCAATGTCATTTTCCCGATCATTTTTGATGCTCTGCAAAA
GAACATAGATAATCATTGGAATCAGGCTATCCATGGGCTGACTGTAAATGTTCGCAAAAT
GTTCATGGAAATGGATGCTGATCTGTTTGATGAGTGCCAAAGACAGTATTCTGAGAAAGC
AGCCCGGGCCACTGAACTGGAAGAGCAGCGAGAACTAAGATGGCAGAGATTAGCGGCAGC
TGCAACACAAGGACGTTAAAAAAGGACACATTCATCGCGATTCCTGTTCCATTAAGGTGG
GATTAGACCCCAAATCCAAACTGGATATGTGGTCCACTACCACGACCATTTGTTATGCTG
GTATTCATTTCTCTTAGTTTTTGTTCGTTGGTTTCAGTGTGTTGAATCGTTGAAGATTAC
TGGCAATGCAGCCGTGTGTAACTCATATAAGTATTTGATAACTGCTTTGTCGCGTGCTGC
AGCTCTGGAATGGCTTGTTTAAGTGTAATTTGTTCTGTAATTTTGCCCTCTTTAGAGAAA
TTTTTATTCTTCAGTGAACTTTGAAGGCAACAATTTCTGATGTTTACAGGTTATTTATAG
TTTTTTTAATGGGTCATTGCACATAGTTTAGTGTTTTAGACAATGGTATCAGAAAGTAGT
ACCGATCTAATTTTGTATTTTCACTTCATAAACGCTTTTATTATTATTATTATTTTTCAC
TTAATCAATGATATGTGTGTTTCACTTCAGA