Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g083540.2.1
CDS Infomation

Threonine dehydratase (AHRD V3.3 *** K4D3E1_SOLLC)
Sequence

ATGGACGTTCTCCGATTCACCGGAGCAACATTCACCGCCAGCACAACAGTTACAGTCGTT
CGTTTCGACGCCATTAAACCTGGAGCAAAATTAAAAACAAAACGAACTAGGTTTATTAGT
GCTACCATTACTAAACCAGCGGCTGTTGTTACGGCAGCAGAGCCACTGCAAATTTCGAAG
AGTGATGATACATTGATACCAGTAGTACATCCGAGTTCGTTACAGTGCGAGGAAGGTTTT
CTGTTACCGAATTATCCACGTGGTGAAATCGGATATAATTATGTTAAAGAGATATTGACA
TCTAAAGTATATGAATTAGCTGAAGAGACGCCATTGCAGCGTGCACATAAGTTATCAGAG
AGGTTAGGGGTAACTGTATGGCTCAAACGTGAAGATCTACATCCGGTCTTCTCATTTAAG
GTCAGAGGATCTTATCATATGATGGCAAAACTCTCGAAGGAGCAGTTAGAAAAGGGCGTT
ATATGCTCATCAGCGGGAAATCATGCACAAGGTGTTGCTTTAGCTGCCAAGAAACTCGGC
TGCAATGCTGTGATTGTGATGCCCGTTACTACGCCAGAAATTAAATGGAAATCAGTTGAG
AGATTGGGCGCTACTGTTGTTCGTGTGGGGGATACATACGAAGAAGCACAAGCATATGCT
GTAGCTCAGGGCAAAGAAGAAGGACGTGCATTCGTTTCTCCCTTTGATCACCCTGATATC
ATAATAGGGCAAGGTACGGTTGGAATGGAGATTAACCGCCAATTCAAAGATAAGATACAC
GCGATATTTGTGCCTATTGGTGGAGGAGGTCTTATAGCTGGCATTGCTGCTTATATGAAA
AAAGTCTCCCCTGATACGAAGATTATTGGTGTTGAGCCAGTCGATTCCAATTCAATGGCG
TTGGCATTACACCACGGTCAAAGAGTAATGCTGGAAAAAGTTGGATCTTTTGCAGATGCA
GTAGCTATTAGAATGGTTGGTGAAGAAAGTTTTCGTCTCTGCAGGGAACTAATAGATGGG
ATCGTCCTAGTTAATCATGATTCTATAAGTGCATCGATAAAGTATGTGAATTTTGTATCT
TCTGATGTGACTGTTGAGTCGTGTTTTGAACAGGACATGTTCGAAGAGAAAAGAAGCATA
CTGGAGCCGGCTGGTGCACTTGCCCTAGCTGGAGCTGAAGCATACTGTAAGTACTATGGC
GTGAAGGGAGAAAACATCGTAGCAATAACTAGTGGAGCCAACATGAACTTTGACAGACTT
AGATTGGTAACTGAACTCGCGGATGTTGGTAGACAGAGGGAAGCTGTTCTCGCTACTTAT
CTGCCTGAAGAACGAGGCAGCTTCAAAAAGTTCTATGAGATGGTGGGACAAACTAATATT
ACGGAATTGAAGTATAGATATGATTCTGAGAAAGAAAATGCTCGAGTATTTTACAGAATT
GGTCTTCACACGAAAGTAGAACTTGAAGAAATGGTGGACAGGATGGAATTAGAACAACTG
CATACGATTAATTATACAGATAATGAATTGGTTAAAGATCATCTAAGACATCTGATAGGT
GGGAGATCAGATGTCCACAATGAGCATCTCTGTCGATTCATTTTCCCATACAAACCTGGT
GTTTTGATGAAGTTTTTAGACGCTTTCAGCCCACGTTGGAATATAAGTTTGTTACATTAC
CATGCACAGGGAGAAACTGGCGGGAATGTGCTAATCGGACTCCAAGTTCCACAGAATGAG
GTTGATGAATTCCGGGGTCGAGCTGAGAGTCTTGGTTATGTGTGTGTTGTGGAGACTCTC
AATGAAGCTTTCCAACAACTGATGCATTGA

Peptide Sequence

PEP ID

Solyc10g083540.2.1
PEP Infomation

Threonine dehydratase (AHRD V3.3 *** K4D3E1_SOLLC)
Sequence

MDVLRFTGATFTASTTVTVVRFDAIKPGAKLKTKRTRFISATITKPAAVVTAAEPLQISK
SDDTLIPVVHPSSLQCEEGFLLPNYPRGEIGYNYVKEILTSKVYELAEETPLQRAHKLSE
RLGVTVWLKREDLHPVFSFKVRGSYHMMAKLSKEQLEKGVICSSAGNHAQGVALAAKKLG
CNAVIVMPVTTPEIKWKSVERLGATVVRVGDTYEEAQAYAVAQGKEEGRAFVSPFDHPDI
IIGQGTVGMEINRQFKDKIHAIFVPIGGGGLIAGIAAYMKKVSPDTKIIGVEPVDSNSMA
LALHHGQRVMLEKVGSFADAVAIRMVGEESFRLCRELIDGIVLVNHDSISASIKYVNFVS
SDVTVESCFEQDMFEEKRSILEPAGALALAGAEAYCKYYGVKGENIVAITSGANMNFDRL
RLVTELADVGRQREAVLATYLPEERGSFKKFYEMVGQTNITELKYRYDSEKENARVFYRI
GLHTKVELEEMVDRMELEQLHTINYTDNELVKDHLRHLIGGRSDVHNEHLCRFIFPYKPG
VLMKFLDAFSPRWNISLLHYHAQGETGGNVLIGLQVPQNEVDEFRGRAESLGYVCVVETL
NEAFQQLMH*

Transcript Sequence

Transcript ID

Solyc10g083540.2.1
Transcript Infomation

Threonine dehydratase (AHRD V3.3 *** K4D3E1_SOLLC)
Sequence

CCTCAACAATCATGGACGTTCTCCGATTCACCGGAGCAACATTCACCGCCAGCACAACAG
TTACAGTCGTTCGTTTCGACGCCATTAAACCTGGAGCAAAATTAAAAACAAAACGAACTA
GGTTTATTAGTGCTACCATTACTAAACCAGCGGCTGTTGTTACGGCAGCAGAGCCACTGC
AAATTTCGAAGAGTGATGATACATTGATACCAGTAGTACATCCGAGTTCGTTACAGTGCG
AGGAAGGTTTTCTGTTACCGAATTATCCACGTGGTGAAATCGGATATAATTATGTTAAAG
AGATATTGACATCTAAAGTATATGAATTAGCTGAAGAGACGCCATTGCAGCGTGCACATA
AGTTATCAGAGAGGTTAGGGGTAACTGTATGGCTCAAACGTGAAGATCTACATCCGGTCT
TCTCATTTAAGGTCAGAGGATCTTATCATATGATGGCAAAACTCTCGAAGGAGCAGTTAG
AAAAGGGCGTTATATGCTCATCAGCGGGAAATCATGCACAAGGTGTTGCTTTAGCTGCCA
AGAAACTCGGCTGCAATGCTGTGATTGTGATGCCCGTTACTACGCCAGAAATTAAATGGA
AATCAGTTGAGAGATTGGGCGCTACTGTTGTTCGTGTGGGGGATACATACGAAGAAGCAC
AAGCATATGCTGTAGCTCAGGGCAAAGAAGAAGGACGTGCATTCGTTTCTCCCTTTGATC
ACCCTGATATCATAATAGGGCAAGGTACGGTTGGAATGGAGATTAACCGCCAATTCAAAG
ATAAGATACACGCGATATTTGTGCCTATTGGTGGAGGAGGTCTTATAGCTGGCATTGCTG
CTTATATGAAAAAAGTCTCCCCTGATACGAAGATTATTGGTGTTGAGCCAGTCGATTCCA
ATTCAATGGCGTTGGCATTACACCACGGTCAAAGAGTAATGCTGGAAAAAGTTGGATCTT
TTGCAGATGCAGTAGCTATTAGAATGGTTGGTGAAGAAAGTTTTCGTCTCTGCAGGGAAC
TAATAGATGGGATCGTCCTAGTTAATCATGATTCTATAAGTGCATCGATAAAGTATGTGA
ATTTTGTATCTTCTGATGTGACTGTTGAGTCGTGTTTTGAACAGGACATGTTCGAAGAGA
AAAGAAGCATACTGGAGCCGGCTGGTGCACTTGCCCTAGCTGGAGCTGAAGCATACTGTA
AGTACTATGGCGTGAAGGGAGAAAACATCGTAGCAATAACTAGTGGAGCCAACATGAACT
TTGACAGACTTAGATTGGTAACTGAACTCGCGGATGTTGGTAGACAGAGGGAAGCTGTTC
TCGCTACTTATCTGCCTGAAGAACGAGGCAGCTTCAAAAAGTTCTATGAGATGGTGGGAC
AAACTAATATTACGGAATTGAAGTATAGATATGATTCTGAGAAAGAAAATGCTCGAGTAT
TTTACAGAATTGGTCTTCACACGAAAGTAGAACTTGAAGAAATGGTGGACAGGATGGAAT
TAGAACAACTGCATACGATTAATTATACAGATAATGAATTGGTTAAAGATCATCTAAGAC
ATCTGATAGGTGGGAGATCAGATGTCCACAATGAGCATCTCTGTCGATTCATTTTCCCAT
ACAAACCTGGTGTTTTGATGAAGTTTTTAGACGCTTTCAGCCCACGTTGGAATATAAGTT
TGTTACATTACCATGCACAGGGAGAAACTGGCGGGAATGTGCTAATCGGACTCCAAGTTC
CACAGAATGAGGTTGATGAATTCCGGGGTCGAGCTGAGAGTCTTGGTTATGTGTGTGTTG
TGGAGACTCTCAATGAAGCTTTCCAACAACTGATGCATTGAAATGGTTTGTATGCATTAT
GAAGTTTTGGTCCTGAAGAAAGTGTTTTTTGTCAATGTTTTGAACCAACACAAGATTATG
CTTTAGCTTTATTCAAATAATAGTAGTCATAGTCTTTAGGGGTAGAGTGCTTTCATGCCC
TGCTTTTGCCATCTTTCAAGCATACGTTGCG