Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g083160.2.1
CDS Infomation

TLD-domain containing nucleolar protein (AHRD V3.3 *** AT5G06260.1)
Sequence

ATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAGAGCTTTC
ACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAG
AGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAGGCATATATTGGAGTTGAAGGGCCA
TTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATAT
GAGGACCTTGTGATTGCTAAAGGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAG
TTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAGATCAGATCTGGAA
GCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCT
AGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGAT
ACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTT
CCATCAGTAAGGAAGTTTCTCGGAACTCTGTTGTCTACACGTGATTCAGGCTCTGAGGTT
CCTATGCTAGTATACCCAGAGAACATTGATCCTGCTGTAATATTGTTAAGAAAGGAATAT
GCTTGGCATATAGGTGGGGCCCTCCCACAAGACGAGCTGCATGAATGGAGACTTTTGTAT
CACAGTACAGTACATGGCCTAAGTTTCAGTACTTTCCTGGGGAACATTTCAAATGACAAA
GGACCAACTTTATTGGTAATTAAAGACAAAGAAGGCTATATTTACGGAGGTTATGCATCT
CAGCCATGGGAGAAGCATGCTGACTTTTATGGGGATATGAAGTCTTTCCTCTTCCAGCTA
TACCCAAAGGCATCGGTTTACCGTCCTACTGGAGCGAACTCTAATTTACAGTGGTGTGCT
ATACATTTTAGTTCTGAGAGCATCCCCAATGGCATTGGTTTTGGAGGACGAGCACACCAC
TTCGGCTTGTTCATCTCAGCTAACTTTGACCTGGGGCATACTTTCACCTGCACGACCTTT
GGCAGTCCTAGCTTGTCAAAGACCCACCAAATCTATCCAGAAGTGATAGAATGCTGGGGA
GTTGCGATAAAAAGAGCTCAAGATAATCAGGATAGACTTCAAGGTACCGTGTTAGAAAGA
TTTAAAGAGGATCGCCATATGCTTAACATGGTTGGACTTGCAAATTCAAGTGAGTGA

Peptide Sequence

PEP ID

Solyc10g083160.2.1
PEP Infomation

TLD-domain containing nucleolar protein (AHRD V3.3 *** AT5G06260.1)
Sequence

MGNSQSNSTNPRFDLAKRAFTERKLEDLKSLFDSLAAQSQSNGKYVSSSVFKAYIGVEGP
LGDRMFDLVTQKRKDQKLTYEDLVIAKGTYEKGTNADIEEFIYQLLDVFDDGVVGRSDLE
AVLTAVLRNISSHESHQSEPSPDREILDIFLNAANLTTDDTKCAESCMSFEEFKSWCARL
PSVRKFLGTLLSTRDSGSEVPMLVYPENIDPAVILLRKEYAWHIGGALPQDELHEWRLLY
HSTVHGLSFSTFLGNISNDKGPTLLVIKDKEGYIYGGYASQPWEKHADFYGDMKSFLFQL
YPKASVYRPTGANSNLQWCAIHFSSESIPNGIGFGGRAHHFGLFISANFDLGHTFTCTTF
GSPSLSKTHQIYPEVIECWGVAIKRAQDNQDRLQGTVLERFKEDRHMLNMVGLANSSE*

Transcript Sequence

Transcript ID

Solyc10g083160.2.1
Transcript Infomation

TLD-domain containing nucleolar protein (AHRD V3.3 *** AT5G06260.1)
Sequence

TGAACAATTAAAAATGGACGGCGGTATAATGATTTATTTCCAGCAAACACACTTGTCATC
CTTGAGCCGATCTTGACTTTGGCCGCTATAACTTCTGGTAGCGTCTGCCTCAGCAAACTG
TGACACTATATCACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAA
GGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACG
AATCCACGTTTTGATTTAGCCAAGAGAGCTTTCACAGAGAGGAAATTGGAAGACTTGAAA
TCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCT
GTTTTCAAGGCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTC
ACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAAGGAACC
TATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTT
GATGATGGCGTTGTTGGAAGATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAAT
ATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATT
TTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCT
TTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTTCCATCAGTAAGGAAGTTTCTCGGAACT
CTGTTGTCTACACGTGATTCAGGCTCTGAGGTTCCTATGCTAGTATACCCAGAGAACATT
GATCCTGCTGTAATATTGTTAAGAAAGGAATATGCTTGGCATATAGGTGGGGCCCTCCCA
CAAGACGAGCTGCATGAATGGAGACTTTTGTATCACAGTACAGTACATGGCCTAAGTTTC
AGTACTTTCCTGGGGAACATTTCAAATGACAAAGGACCAACTTTATTGGTAATTAAAGAC
AAAGAAGGCTATATTTACGGAGGTTATGCATCTCAGCCATGGGAGAAGCATGCTGACTTT
TATGGGGATATGAAGTCTTTCCTCTTCCAGCTATACCCAAAGGCATCGGTTTACCGTCCT
ACTGGAGCGAACTCTAATTTACAGTGGTGTGCTATACATTTTAGTTCTGAGAGCATCCCC
AATGGCATTGGTTTTGGAGGACGAGCACACCACTTCGGCTTGTTCATCTCAGCTAACTTT
GACCTGGGGCATACTTTCACCTGCACGACCTTTGGCAGTCCTAGCTTGTCAAAGACCCAC
CAAATCTATCCAGAAGTGATAGAATGCTGGGGAGTTGCGATAAAAAGAGCTCAAGATAAT
CAGGATAGACTTCAAGGTACCGTGTTAGAAAGATTTAAAGAGGATCGCCATATGCTTAAC
ATGGTTGGACTTGCAAATTCAAGTGAGTGATGTGCCCTCTGTACTTTCTTCTTGTGCTGA
ATTAGCACAGTTTCTAGAGTTTATTGTCTTGCGTGTAGTTTAATAATGTGTTGTGTTACT
ACAATATAAGTGAGTGCAAAATCACTAGATGCTCAACCCCGTGTATGCGTCGATAGCATC
TAGAGTGTAATTTAAGGTTTTGCAATCATTACTATCCCTGGAGTCTTGGCAAATTTCTTC
ATGCCATTCTCCTAATCATTGTTAATAGTAATTGTCATTTTGATGTATTGTTAGCGTATG
CAGATTCAACATTTTGTTACTCTTCTTAAGGTGATCTCAACATAATAAGCGCCTTGTCAT
GTTGCTCAATTTGTTGGCATAGATATGAAAAAGAAACAAAAGCATTTTTACAATTGTGAT
TCAATGTGTTTACATATTGTTCTCCATTCTAATATGTGAAATGAGAAAAATAAAAGATAA
TTAAATCTTCAATCGAGACAGTTCAACAATATTGTAATTTTACAAGTGACGTCTGAAGAA
GATATCTCAATCAAATAACATTTTTTTTTGTGTTAAAAACATTTCATTTATGAAACAAAA
CATGAATGCAATAAGAAATAGTGTCGAAATAAAACATGTAGGTTTCAAGAAAAAAGAGTT
TTGCATATTTTCGTTAATCATATATAATTATATCCATAGATTTCTCGAAACAAACCATGA
ATAAAACGCAACAAAACCTTTTTCCTTTCCTTTCACATTTATGAATCGAAGCAATGAGAT
TCGATTCAATTTTATGATTAAATCAAATATATTCCTTCGTTAGTTTAATAACAAAAACTG
ACTATCATGGGCTTCATGGTACATAACTTGCCATTTTAGAGATTTTATTTTCGATAAACC
TCGTAAACAGAAACACACGTAGTTTAAGAAAAAACAAAAGCTTGGTAAAAATGCAATATT
CAATTCATAGAGAGAAATGCACATTACTCAGAGATTCAAAAATACTAAATTAGTTCACAA
AATCCCAAATTTAAACAATAATCAGATAAAATCAAGTCTACAATTCAGCAAAAATAACTT
CTCATAACCAAAAAAAAAACGAACAAACCGATCTCAGTAACCACCA