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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g081600.2.1
CDS Infomation

Rhomboid family protein (AHRD V3.3 *** B9H9X7_POPTR)
Sequence

ATGAGACCAAATATTGTTTCTGAGGCGGGACTACAGACAAGGATGGGACAGTGGTGGGAA
GGAATTCCTATCCTTACATCTGCAATAGTGGTTGTTTGTGGGATAATATACTTGGTTTGT
CTTCTGGTTGGGTATGACTCATTTGCTGAAGTATGCTTCTGGCCATCTGCTGTAATTTCT
CGATTTCAAGTTTACAGGATTTTCACCTCAATTCTGTTTCATGGTTCTCTACTGCATGTT
CTGTTTAATATGTTAGCTTTGGTCCCTTTGGGTTCAGAGCTGGAGAGGATTATGGGATCA
GTGCGCCTGTTATATATAATTGTTCTGTTGGCCATTAGCAATGCCTTACTCCATCTTCTT
ATAGCATTGTTGGTTGCCCATAATCCCCTTCATCCTTATCCATACTTTATGGACGAGTGT
GCTATAGGTTTCTCAGGGATCTTATTTTCAATGATTGTGATGGAGACAAGTCTCAGTGGG
GCCCAAACTAGAAGTGTGTTTGGGCTTTTTAATGTGCCAGCTAAATGGTATGCATTGATC
TTACTGGTGGTTTTTCAGCTTGTTATGACTAATGTCTCTTTACTTGGACATCTTTGTGGT
ATTTTGTCTGGATTTGCATATACATATGGATTGTTCAATGTCTTAATACCTGGGACATCT
TTCTTCTCGGCTATTGAATCTTCCACTTGGCTATCAACTTGTGTGAGGAGACCAAAGTTT
ATTATGTGCACTGGTGGTAATGGTGCAGGATACCTACCGACACATTCAAATCAAACAGTG
ACCTCCAGAAGTGAAGTGCTTTCTGGAAATATTTGGGAGAACCTTTCTTCGTGGATGCCA
CAGAGAGAGAGCTCTCTCTCTGCTCAGCCGGTGACAGATGATAGCAGGTTTCCTGGGAGA
GGAAGAACTCTGAGTTCCCAGACCACCACCACTAATCATGATTCAACGTTACAGGCTAGG
CTCCTGGATGGTAGCAGCAGCCCTGAGCGTAGTTCACCTACTGCTACAATAGCTGGAGAG
CGGAGCTTAGCTGGAAGACTATCAGCAGTTGATACTACCACCACAGCTACAAGACCGCTA
GGACAGCAGGCTTCCATTCCCTCAGATGAAGAAGTTCAGAAACTTGTTGCAATGGGTTTT
GAGAAGACACAAGTAGAAGTTGCACTGGCTGCAGCCGAAGGGGACTTGAATGTTGCTGTG
GAAATTTTAATGAGCCAACAGGGTTAA

Peptide Sequence

PEP ID

Solyc10g081600.2.1
PEP Infomation

Rhomboid family protein (AHRD V3.3 *** B9H9X7_POPTR)
Sequence

MRPNIVSEAGLQTRMGQWWEGIPILTSAIVVVCGIIYLVCLLVGYDSFAEVCFWPSAVIS
RFQVYRIFTSILFHGSLLHVLFNMLALVPLGSELERIMGSVRLLYIIVLLAISNALLHLL
IALLVAHNPLHPYPYFMDECAIGFSGILFSMIVMETSLSGAQTRSVFGLFNVPAKWYALI
LLVVFQLVMTNVSLLGHLCGILSGFAYTYGLFNVLIPGTSFFSAIESSTWLSTCVRRPKF
IMCTGGNGAGYLPTHSNQTVTSRSEVLSGNIWENLSSWMPQRESSLSAQPVTDDSRFPGR
GRTLSSQTTTTNHDSTLQARLLDGSSSPERSSPTATIAGERSLAGRLSAVDTTTTATRPL
GQQASIPSDEEVQKLVAMGFEKTQVEVALAAAEGDLNVAVEILMSQQG*

Transcript Sequence

Transcript ID

Solyc10g081600.2.1
Transcript Infomation

Rhomboid family protein (AHRD V3.3 *** B9H9X7_POPTR)
Sequence

TTAAATAATAATATAATGGATTCGAATTGGACATTTTATCATAGACCCGACCCGGAAAAC
ATGAGTATATATAATATGTACTCTTGAGTTCTATACTCTACCTGAAGAAAAATTGGAAAT
CTCTGAAGAAGAAGAAGAAGAAAAAACTCAGCGAAAATGAGACCAAATATTGTTTCTGAG
GCGGGACTACAGACAAGGATGGGACAGTGGTGGGAAGGAATTCCTATCCTTACATCTGCA
ATAGTGGTTGTTTGTGGGATAATATACTTGGTTTGTCTTCTGGTTGGGTATGACTCATTT
GCTGAAGTATGCTTCTGGCCATCTGCTGTAATTTCTCGATTTCAAGTTTACAGGATTTTC
ACCTCAATTCTGTTTCATGGTTCTCTACTGCATGTTCTGTTTAATATGTTAGCTTTGGTC
CCTTTGGGTTCAGAGCTGGAGAGGATTATGGGATCAGTGCGCCTGTTATATATAATTGTT
CTGTTGGCCATTAGCAATGCCTTACTCCATCTTCTTATAGCATTGTTGGTTGCCCATAAT
CCCCTTCATCCTTATCCATACTTTATGGACGAGTGTGCTATAGGTTTCTCAGGGATCTTA
TTTTCAATGATTGTGATGGAGACAAGTCTCAGTGGGGCCCAAACTAGAAGTGTGTTTGGG
CTTTTTAATGTGCCAGCTAAATGGTATGCATTGATCTTACTGGTGGTTTTTCAGCTTGTT
ATGACTAATGTCTCTTTACTTGGACATCTTTGTGGTATTTTGTCTGGATTTGCATATACA
TATGGATTGTTCAATGTCTTAATACCTGGGACATCTTTCTTCTCGGCTATTGAATCTTCC
ACTTGGCTATCAACTTGTGTGAGGAGACCAAAGTTTATTATGTGCACTGGTGGTAATGGT
GCAGGATACCTACCGACACATTCAAATCAAACAGTGACCTCCAGAAGTGAAGTGCTTTCT
GGAAATATTTGGGAGAACCTTTCTTCGTGGATGCCACAGAGAGAGAGCTCTCTCTCTGCT
CAGCCGGTGACAGATGATAGCAGGTTTCCTGGGAGAGGAAGAACTCTGAGTTCCCAGACC
ACCACCACTAATCATGATTCAACGTTACAGGCTAGGCTCCTGGATGGTAGCAGCAGCCCT
GAGCGTAGTTCACCTACTGCTACAATAGCTGGAGAGCGGAGCTTAGCTGGAAGACTATCA
GCAGTTGATACTACCACCACAGCTACAAGACCGCTAGGACAGCAGGCTTCCATTCCCTCA
GATGAAGAAGTTCAGAAACTTGTTGCAATGGGTTTTGAGAAGACACAAGTAGAAGTTGCA
CTGGCTGCAGCCGAAGGGGACTTGAATGTTGCTGTGGAAATTTTAATGAGCCAACAGGGT
TAATATGAAAGGATATAACATCAAGATTTGACTCAAAAAGCCGAGGCTCTGCAAAACTAG
TAATCTAATTCCTCGAGCCCTCGTTGTTTTCCTCTTCTTTTTGGTTGTATATAATCTTAC
AGCAAATTTACACAATTCTTAGAGAGATGGAAGACCTTCTTAGTGTGTGATTTACGCCTA
ATCCCCATAAAACAGAGATGAATTGTATATCTACCTTCATGATTTTAGATGCTGCAATAT
CAATGAATCATTTTATATTTTCTTAGCCTATA