Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g081540.2.1
CDS Infomation

diphthamide synthesis DPH2 family protein (AHRD V3.3 *** AT3G59630.2)
Sequence

ATGGATTTGGAGTCGACTTATGAGATTGATCGTGTCGCCGGATTCATATCGGCGAGAGGT
TTCCGACGAGTTGCTCTTCAGTTCCCAGATAATTTGTTGAAAGATTCCACGAGGATAGTT
GCTGCTCTACATGAAAAACTTCGCTCGTTCAGTCAGTTACATGCTGGAAGGAATGGAGAT
GCAAAGGATGTTAAGCTGTATGTAATGGCAGATACCATGTATGGAAATTGCTGTGTCGAT
GAAGTTGGAGCATCTCATGCCAATGCGGACTGCGTTATCCATTATGGTCATACTTGCTTC
AGTCCGACATCAACTCTTCCCGCATTTCTTGTCCTTGGAAAAGCTTCTCTAAATGTGCCA
CTATGTGCTCAAACACTATGCAAGTATACCATAAAAGCTGGCAAACCTATTTTGGTTCTT
TATGGACTTGAATATACACATACAATCACAGAAATTAAAGCATCAGTGGGCGCTCAAGTA
TGCTCCGAGCTGGAAGTTCATTATGCTGATATTATTTCTCCAATCATAACTCCACCAGAG
ACTTTTAGCTCGATGAATGAGCAACCAGAACTAAGTGATGGTCAATGTGCAAATGGCTGT
TCTATTGAGGTGAATGATGCAATATATTGTGTTGGAGGGTTGACGTGGTCGTTACCAGTG
GGACACAGGATTGAGGACTACTTGATTTTCTATGTTGGTTCAGATGACCCAGCCTTTGCA
AATATACTAATGACATACAATGCTTGTGAAATAGTCAGATATGATGCTACTGAAGATAAG
TTGGTGAACGAGTTTTCTCAGCAGAAAAGGATTCTTAAGCGTAGGTATTTCCTTATTGAG
AAAGCAAAGGATGCTAGCATCATAGGGATCTTGGTAGGAACACTTGGAGTAGCTGGTTAC
CTCCACATGATTCATCAAATGAAAGACTTGATTACACGAGCTGGCAAGAAAGCCTATACT
TTTGTTATGGGGAGACCTAACCCTGCAAAGCTTGCCAACTTCCCTGAGTGCGATATCTTC
GTTTATGTTTCTTGTGCACAAACTGCTCTATTGGATAGTAAAGAGTTCTTAGCTCCAGTT
ATTACTCCTTTTGAAGCAATGATTGCTTTCGGCAGAGGAAGCGAATGGACTGGGGCTTAT
GTGACAGAATTTCGGGATTTGATTACTTCTTCCCCCATGGAAGCGAAAAACCAGTCAGAA
GCTCGGTTTTCTTTCATTCAGGGCGGATACGTGGAAGATGTTGAACAGCAAGAGGTTGAA
GAAGTTGAAGATGGAGTTTCTGCTTTAGTGAACATCACAGAGAAGGCTTTGCGTGTTCGT
GACAAAGACTCACAAACTCTAATGCCCGGAACAGCTAAATCTGGTGCAGAGTACTTCGCG
ACTAGGTCATATCACGGCCTTGACATTCATCCTGAAAATAATTTCTCCGAGCCGTTTTTG
ATTGGTAAAAGTGGGAGGGCATCAGGATACAGGAATGAAACTGCACAAAAAAGTTAG

Peptide Sequence

PEP ID

Solyc10g081540.2.1
PEP Infomation

diphthamide synthesis DPH2 family protein (AHRD V3.3 *** AT3G59630.2)
Sequence

MDLESTYEIDRVAGFISARGFRRVALQFPDNLLKDSTRIVAALHEKLRSFSQLHAGRNGD
AKDVKLYVMADTMYGNCCVDEVGASHANADCVIHYGHTCFSPTSTLPAFLVLGKASLNVP
LCAQTLCKYTIKAGKPILVLYGLEYTHTITEIKASVGAQVCSELEVHYADIISPIITPPE
TFSSMNEQPELSDGQCANGCSIEVNDAIYCVGGLTWSLPVGHRIEDYLIFYVGSDDPAFA
NILMTYNACEIVRYDATEDKLVNEFSQQKRILKRRYFLIEKAKDASIIGILVGTLGVAGY
LHMIHQMKDLITRAGKKAYTFVMGRPNPAKLANFPECDIFVYVSCAQTALLDSKEFLAPV
ITPFEAMIAFGRGSEWTGAYVTEFRDLITSSPMEAKNQSEARFSFIQGGYVEDVEQQEVE
EVEDGVSALVNITEKALRVRDKDSQTLMPGTAKSGAEYFATRSYHGLDIHPENNFSEPFL
IGKSGRASGYRNETAQKS*

Transcript Sequence

Transcript ID

Solyc10g081540.2.1
Transcript Infomation

diphthamide synthesis DPH2 family protein (AHRD V3.3 *** AT3G59630.2)
Sequence

TCTTCATAACCCTTCAATGGCTTCTTCGAGCTCTTTTCACCTCTGTTTATAGCTCGAGCT
TTAAATTCTTTTCTGTGTGGAATTTGGTACTGCAAATTTAGGATTTTGACTGTTAATTAC
TGAAATTTATTTTTTCCTCTCCAGTTTTTAGCTTCTCAATGGATTTGGAGTCGACTTATG
AGATTGATCGTGTCGCCGGATTCATATCGGCGAGAGGTTTCCGACGAGTTGCTCTTCAGT
TCCCAGATAATTTGTTGAAAGATTCCACGAGGATAGTTGCTGCTCTACATGAAAAACTTC
GCTCGTTCAGTCAGTTACATGCTGGAAGGAATGGAGATGCAAAGGATGTTAAGCTGTATG
TAATGGCAGATACCATGTATGGAAATTGCTGTGTCGATGAAGTTGGAGCATCTCATGCCA
ATGCGGACTGCGTTATCCATTATGGTCATACTTGCTTCAGTCCGACATCAACTCTTCCCG
CATTTCTTGTCCTTGGAAAAGCTTCTCTAAATGTGCCACTATGTGCTCAAACACTATGCA
AGTATACCATAAAAGCTGGCAAACCTATTTTGGTTCTTTATGGACTTGAATATACACATA
CAATCACAGAAATTAAAGCATCAGTGGGCGCTCAAGTATGCTCCGAGCTGGAAGTTCATT
ATGCTGATATTATTTCTCCAATCATAACTCCACCAGAGACTTTTAGCTCGATGAATGAGC
AACCAGAACTAAGTGATGGTCAATGTGCAAATGGCTGTTCTATTGAGGTGAATGATGCAA
TATATTGTGTTGGAGGGTTGACGTGGTCGTTACCAGTGGGACACAGGATTGAGGACTACT
TGATTTTCTATGTTGGTTCAGATGACCCAGCCTTTGCAAATATACTAATGACATACAATG
CTTGTGAAATAGTCAGATATGATGCTACTGAAGATAAGTTGGTGAACGAGTTTTCTCAGC
AGAAAAGGATTCTTAAGCGTAGGTATTTCCTTATTGAGAAAGCAAAGGATGCTAGCATCA
TAGGGATCTTGGTAGGAACACTTGGAGTAGCTGGTTACCTCCACATGATTCATCAAATGA
AAGACTTGATTACACGAGCTGGCAAGAAAGCCTATACTTTTGTTATGGGGAGACCTAACC
CTGCAAAGCTTGCCAACTTCCCTGAGTGCGATATCTTCGTTTATGTTTCTTGTGCACAAA
CTGCTCTATTGGATAGTAAAGAGTTCTTAGCTCCAGTTATTACTCCTTTTGAAGCAATGA
TTGCTTTCGGCAGAGGAAGCGAATGGACTGGGGCTTATGTGACAGAATTTCGGGATTTGA
TTACTTCTTCCCCCATGGAAGCGAAAAACCAGTCAGAAGCTCGGTTTTCTTTCATTCAGG
GCGGATACGTGGAAGATGTTGAACAGCAAGAGGTTGAAGAAGTTGAAGATGGAGTTTCTG
CTTTAGTGAACATCACAGAGAAGGCTTTGCGTGTTCGTGACAAAGACTCACAAACTCTAA
TGCCCGGAACAGCTAAATCTGGTGCAGAGTACTTCGCGACTAGGTCATATCACGGCCTTG
ACATTCATCCTGAAAATAATTTCTCCGAGCCGTTTTTGATTGGTAAAAGTGGGAGGGCAT
CAGGATACAGGAATGAAACTGCACAAAAAAGTTAGCAATTGGAACCACTATACGCATTAA
GATGAATTTGTGGAAGATGCAGCAGACATACAAAGCCACTCTAAATGATTTGTAACATCA
GCAGCTATTTATGCCTTTTGGTCTCAAATGGCTATTTTTTGTTTCTTCAGTCATTATGTG
TATATATAGTTTTGATGATCTTACTACCTATAAATTTCTTTTTGACAATTTTGGGATATT
TTCTTCCACATTCTTTTGTTTTGGTAGTCATATATTTTAATAGATGAACAGCTCCATCTT
TGTATTGGTAGTTTGGTGAGTGTTTTTTTTTTTTGCATTTACTCAAATTGTCATGAACTT
CTCAATTTAAAACTACTTTTTTCATTCATTGAGATGATCGAAACGGAAAATCTTAGTAGC
TGAGTTTGTTGACTATCAAAATTTCCACACTATTAGTAAGAGTTTGATTTTCCTTCCTTG
TTATATGCCCTCCCATGGTTAAGGATGTAAGAATTTTATTCGAGTTTGTGATAGACATAT
ATGTCTTCTTTTATATATACACCTTATCATTGAATTGTGTAGTTAACTAATACATTTTTT
CACCTCAATTTATGACATAAACATGAAATTGTAGTATAGTTTTGTTGTAATGATTTGAGT
ACGAGACTTTCTTTTACCATTTACAATACCAGATGATTAAATTTGAAAAAAAAAATACAC
AAAAAGAAAAACATTACATGTCATTTTGTCAACGGAACACGTTAAAATAAGCTAGAAGTT
GTAG