Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g081500.1.1
CDS Infomation

LOW QUALITY:Ankyrin repeat-containing protein (AHRD V3.3 *** A0A103YI11_CYNCS)
Sequence

ATGGATAGGCTACTAACTCTGGAGCCATCGAACGTGGTTACAATACGACTTGAACCAGGT
CAGAGGTGTTCAGGTGCGCTAACCCTGCGTAACGTCATGTACACCATGCCAGTTGCGTTC
CGTCTGCAGCCAGTAAACAAGACACGTTACGCGATCCGTCCTCAATCGGGAATCATCTCT
CCTCTAACAACAATCACTTTGGAGATAATTTACCGTCTCCCTCCAAACACAACTCTGCCA
AGCACTTTCCCTCACTCTGATCACTCATTCCTTTTGCACAGTGTTGTGGCCCCAGGAGCA
GCTATTAACAACAAGGCCACTTCCTTAGATATGGTCCCGATTGATTGGTTCACTACAAAG
AAAAAACAAGTTTTCATTGATAGTGCTATAAAAGTAATGTTTATTGGTTCGCCTGTTTTG
TGCTATCTTGTTAAAAAAGGCTATATGGATGAAATTAGAGAAGTTTTAGAAAAAAGTGAC
TATAATTGCAAGCCTGTTGACTCAGTTGACTGTGAAGGTAAAACATTATTACATTTGGCT
ATTTCACAAAGTAGGGCTGATTTAGTCCAATTGTTACTTGAATTTGGGCCTAACATTGAG
GCCCATAGTAGATCATGTTCAAGCCCATTAGAAACAGCAGCAGCATTAGGAGAGTCTTTA
ATTGTTGAGCTTTTATTAGCAAAAAAGGCTAAAACTGAAAGAACAGAGTACTCTGCTTCA
GGCCCAATACATCTTGCTGCTGGAAATGGCCATTTGGAAGTACTAAAACTACTCTTACTC
AATGGTGCTAATGTGAATGCACTAACGAAAGACGGTAACACGGCCTTGCATATCGCGGTG
GAGGAAGGTAGACGAGATTGTGTTCGTGTTTTACTGGCTAATGGCGCGAGAGCTGATGCG
CGAAACGAGGGGAATTGTGATACACCTTTGCATATTGCTGCTGCATTAGGTGATGAACAT
ATGGTACGCGTATTAATTCAAAAAGGTGCTGAGAAAAATATACGTAACAAATATGGGAAA
ACTGCTTATGATGTTGCTGCTGAACATGGACATAACAAGCTTTTCGATGCTCTACGTTTA
GGTGATAGCTTATGTGTGGCGGCTCGAAAAGGAGAGGTAAGAACCATCCAACGTCTCCTG
GAAAACGGAGCCATCATCAACGGATGTGACCAACATGGTTGGACCGCGTTGCACCGGGCT
AGTTTCAAAGGACGAATAGAAGTTGTAAAAACATTAATAGAAAATGGAATTGATATAAAT
GCAAAAGATGAAGATGGATATAGTGCATTACATTGTGCTGTTGAATCTGGACATGTTGAT
GTAGCTGAATTACTAGTTAAAAAAGGTGCAGACATTGATTCAAGGACAAATAAAGGTGTT
AGTCCGTTACGTATCGCAGAATCGTTGAAATATTCAGGGTTGACTAGGGTGATCATGCAA
GGTAATGGAGTGAAAGAACAAGTAGGGGCAAAATTGGAAATGAATATCGCGAAATCCTAC
GGTAAAATGACTAAAGAAGTCGAAATTATTGGGAGTGTGAAAAAAAGAAGTCATGTGAAT
AAATCGTCAAGAGTTCGGAGGAGTAGCATTGATAGAACTATTTGA

Peptide Sequence

PEP ID

Solyc10g081500.1.1
PEP Infomation

LOW QUALITY:Ankyrin repeat-containing protein (AHRD V3.3 *** A0A103YI11_CYNCS)
Sequence

MDRLLTLEPSNVVTIRLEPGQRCSGALTLRNVMYTMPVAFRLQPVNKTRYAIRPQSGIIS
PLTTITLEIIYRLPPNTTLPSTFPHSDHSFLLHSVVAPGAAINNKATSLDMVPIDWFTTK
KKQVFIDSAIKVMFIGSPVLCYLVKKGYMDEIREVLEKSDYNCKPVDSVDCEGKTLLHLA
ISQSRADLVQLLLEFGPNIEAHSRSCSSPLETAAALGESLIVELLLAKKAKTERTEYSAS
GPIHLAAGNGHLEVLKLLLLNGANVNALTKDGNTALHIAVEEGRRDCVRVLLANGARADA
RNEGNCDTPLHIAAALGDEHMVRVLIQKGAEKNIRNKYGKTAYDVAAEHGHNKLFDALRL
GDSLCVAARKGEVRTIQRLLENGAIINGCDQHGWTALHRASFKGRIEVVKTLIENGIDIN
AKDEDGYSALHCAVESGHVDVAELLVKKGADIDSRTNKGVSPLRIAESLKYSGLTRVIMQ
GNGVKEQVGAKLEMNIAKSYGKMTKEVEIIGSVKKRSHVNKSSRVRRSSIDRTI*

Transcript Sequence

Transcript ID

Solyc10g081500.1.1
Transcript Infomation

LOW QUALITY:Ankyrin repeat-containing protein (AHRD V3.3 *** A0A103YI11_CYNCS)
Sequence

ATGGATAGGCTACTAACTCTGGAGCCATCGAACGTGGTTACAATACGACTTGAACCAGGT
CAGAGGTGTTCAGGTGCGCTAACCCTGCGTAACGTCATGTACACCATGCCAGTTGCGTTC
CGTCTGCAGCCAGTAAACAAGACACGTTACGCGATCCGTCCTCAATCGGGAATCATCTCT
CCTCTAACAACAATCACTTTGGAGATAATTTACCGTCTCCCTCCAAACACAACTCTGCCA
AGCACTTTCCCTCACTCTGATCACTCATTCCTTTTGCACAGTGTTGTGGCCCCAGGAGCA
GCTATTAACAACAAGGCCACTTCCTTAGATATGGTCCCGATTGATTGGTTCACTACAAAG
AAAAAACAAGTTTTCATTGATAGTGCTATAAAAGTAATGTTTATTGGTTCGCCTGTTTTG
TGCTATCTTGTTAAAAAAGGCTATATGGATGAAATTAGAGAAGTTTTAGAAAAAAGTGAC
TATAATTGCAAGCCTGTTGACTCAGTTGACTGTGAAGGTAAAACATTATTACATTTGGCT
ATTTCACAAAGTAGGGCTGATTTAGTCCAATTGTTACTTGAATTTGGGCCTAACATTGAG
GCCCATAGTAGATCATGTTCAAGCCCATTAGAAACAGCAGCAGCATTAGGAGAGTCTTTA
ATTGTTGAGCTTTTATTAGCAAAAAAGGCTAAAACTGAAAGAACAGAGTACTCTGCTTCA
GGCCCAATACATCTTGCTGCTGGAAATGGCCATTTGGAAGTACTAAAACTACTCTTACTC
AATGGTGCTAATGTGAATGCACTAACGAAAGACGGTAACACGGCCTTGCATATCGCGGTG
GAGGAAGGTAGACGAGATTGTGTTCGTGTTTTACTGGCTAATGGCGCGAGAGCTGATGCG
CGAAACGAGGGGAATTGTGATACACCTTTGCATATTGCTGCTGCATTAGGTGATGAACAT
ATGGTACGCGTATTAATTCAAAAAGGTGCTGAGAAAAATATACGTAACAAATATGGGAAA
ACTGCTTATGATGTTGCTGCTGAACATGGACATAACAAGCTTTTCGATGCTCTACGTTTA
GGTGATAGCTTATGTGTGGCGGCTCGAAAAGGAGAGGTAAGAACCATCCAACGTCTCCTG
GAAAACGGAGCCATCATCAACGGATGTGACCAACATGGTTGGACCGCGTTGCACCGGGCT
AGTTTCAAAGGACGAATAGAAGTTGTAAAAACATTAATAGAAAATGGAATTGATATAAAT
GCAAAAGATGAAGATGGATATAGTGCATTACATTGTGCTGTTGAATCTGGACATGTTGAT
GTAGCTGAATTACTAGTTAAAAAAGGTGCAGACATTGATTCAAGGACAAATAAAGGTGTT
AGTCCGTTACGTATCGCAGAATCGTTGAAATATTCAGGGTTGACTAGGGTGATCATGCAA
GGTAATGGAGTGAAAGAACAAGTAGGGGCAAAATTGGAAATGAATATCGCGAAATCCTAC
GGTAAAATGACTAAAGAAGTCGAAATTATTGGGAGTGTGAAAAAAAGAAGTCATGTGAAT
AAATCGTCAAGAGTTCGGAGGAGTAGCATTGATAGAACTATTTGA