Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g081110.2.1
CDS Infomation

RING finger superfamily protein
Sequence

ATGGACCAAGAATTGCATAGAAATTTAGTTAGTGGAAATGGTGGGTTTGAACCAAGATAC
TTTAGAGGTTTAAGTACCCCTTTTTCATTTTCTTTAACAAGATTGGCCTCTTGTTTCAAT
CTTCACAATCAAAGTTTTGATGATTATGGTGATGGGGTTTCTTATTGTGATTATGGGTAT
TCAAGACCTATTGTGTTTCTTGATGTGATATGGAATTTGGCATTTGTTTTGGTTTCTTGT
TTTGTGTTATTGACTACTCTTGGAGAAAAGCCTTCTACTCCATTGAGGCTTTGGATTGGT
GGTTATGCACTTCAGTGCCTCTTGCATGTTGGTTTTATTTGGGTTGAGTTTCAAAGAAGG
AGTTTTGATGATTTTGATGCTGGGAATTTTGATGGGGCTTCTTCTTTTTCACTGCTTCAC
AGCAGCAGCATCATGAAGAGGTTGGAATCAGTCAATACTGTGATTTCATCAATCTGGTGG
GTATTTGGCTTTTATTGGATTGTTATGGGTGGCCAGGAACTTCTGCAAGATTCACCTCGC
CTTTACTGGTTATCAGTTGTTTTCCTAGCATTTGATGTGTTCTTTATGATCTTTTGCATT
GCGATGGGAATTGTAGTCTTCTTCGCATTCTTTTGCTTTTTTCCATTTATCGCAACAGTT
GCATATGCCATGAGACTTGGAGATGGAGCATCTGAAAATGATATCAAGACTCTTCCCAAG
TATAGATATGGCCAACTAAATACTTCAGGGAACCTTGTAAAAATGAAGACAGGAGAAGAT
CACTCAATATCACAGCTCAATAGTAGTGCCTCTGTACCTGAGCTTGCTCTTAAACCAGAT
GATTCTGAATGCTGCATCTGCCTTTACAAATATGTAGAAGGGGCAGAGCTGTGTGTTCTT
CCCTGCAATCATCATTTTCACAATGGATGCATTAGCAAATGGCTAAGGATCAATGCAACC
TGTCCCCTCTGCAAATTCAATATTCTTAGGGGTGACACTCTAGTCTGA

Peptide Sequence

PEP ID

Solyc10g081110.2.1
PEP Infomation

RING finger superfamily protein
Sequence

MDQELHRNLVSGNGGFEPRYFRGLSTPFSFSLTRLASCFNLHNQSFDDYGDGVSYCDYGY
SRPIVFLDVIWNLAFVLVSCFVLLTTLGEKPSTPLRLWIGGYALQCLLHVGFIWVEFQRR
SFDDFDAGNFDGASSFSLLHSSSIMKRLESVNTVISSIWWVFGFYWIVMGGQELLQDSPR
LYWLSVVFLAFDVFFMIFCIAMGIVVFFAFFCFFPFIATVAYAMRLGDGASENDIKTLPK
YRYGQLNTSGNLVKMKTGEDHSISQLNSSASVPELALKPDDSECCICLYKYVEGAELCVL
PCNHHFHNGCISKWLRINATCPLCKFNILRGDTLV*

Transcript Sequence

Transcript ID

Solyc10g081110.2.1
Transcript Infomation

RING finger superfamily protein
Sequence

AAGCAAAAAGATTGAAACTTTATGCAAAATGGACCAAGAATTGCATAGAAATTTAGTTAG
TGGAAATGGTGGGTTTGAACCAAGATACTTTAGAGGTTTAAGTACCCCTTTTTCATTTTC
TTTAACAAGATTGGCCTCTTGTTTCAATCTTCACAATCAAAGTTTTGATGATTATGGTGA
TGGGGTTTCTTATTGTGATTATGGGTATTCAAGACCTATTGTGTTTCTTGATGTGATATG
GAATTTGGCATTTGTTTTGGTTTCTTGTTTTGTGTTATTGACTACTCTTGGAGAAAAGCC
TTCTACTCCATTGAGGCTTTGGATTGGTGGTTATGCACTTCAGTGCCTCTTGCATGTTGG
TTTTATTTGGGTTGAGTTTCAAAGAAGGAGTTTTGATGATTTTGATGCTGGGAATTTTGA
TGGGGCTTCTTCTTTTTCACTGCTTCACAGCAGCAGCATCATGAAGAGGTTGGAATCAGT
CAATACTGTGATTTCATCAATCTGGTGGGTATTTGGCTTTTATTGGATTGTTATGGGTGG
CCAGGAACTTCTGCAAGATTCACCTCGCCTTTACTGGTTATCAGTTGTTTTCCTAGCATT
TGATGTGTTCTTTATGATCTTTTGCATTGCGATGGGAATTGTAGTCTTCTTCGCATTCTT
TTGCTTTTTTCCATTTATCGCAACAGTTGCATATGCCATGAGACTTGGAGATGGAGCATC
TGAAAATGATATCAAGACTCTTCCCAAGTATAGATATGGCCAACTAAATACTTCAGGGAA
CCTTGTAAAAATGAAGACAGGAGAAGATCACTCAATATCACAGCTCAATAGTAGTGCCTC
TGTACCTGAGCTTGCTCTTAAACCAGATGATTCTGAATGCTGCATCTGCCTTTACAAATA
TGTAGAAGGGGCAGAGCTGTGTGTTCTTCCCTGCAATCATCATTTTCACAATGGATGCAT
TAGCAAATGGCTAAGGATCAATGCAACCTGTCCCCTCTGCAAATTCAATATTCTTAGGGG
TGACACTCTAGTCTGACTATTTGTCCGTCAGACTTGAGTTGGGACTATACTGAGAAATGT
AACTTTTTTTTTCTCATGGCCTGCTTGTCTTTTGGCAAAATGTATGTAAAATTAGCCATA
TTTAATGCTTGTCTCACCCTCAGCTATTACACCCGGTAGCCTTTGTATATTTGATTAGTT
AGCTTCTCTTTACAGCCTACTTAAGCAGACTCTTCATTGTTTTGCGAGTTTCATAGCTAA
ATCGCTGTGTGTTCACAGAAAAGAATATTATGACAAGTTATGTGAAAATCATGCTCAAAA
AAATCCCCAGAAAGTTTCAGAAATAGTGAAGGTTAGATAACAGCAACACTC