Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g080710.2.1
CDS Infomation

asparaginyl-tRNA synthetase
Sequence

ATGTCAGTCGATTCAGCGCCGCCGGTGGAAAAACTCACCCTAACCGACGTCGTAGAGGAG
GCGAGATTCTCTCAACGCGTCCCGATCTGTTCAATCGTCGGCCGTACCGACGGAGGAGCT
GGACTCGCCGGAAATGTTGTCAAAATCGGTGGTTGGGTCAAAACAGGAAGAGAACAGGGC
AAGGGTTCATTCGCTTTCCTCGAAGTGAATGACGGTTCATGCCCAGGGAATCTTCAAGTG
ATCGTTGATGCTTCAGTTCATAAGCTTGGTGATTTGGTACTTACTGGTACTTGTGTACAT
GTGGAAGGTGAATTGAAGGTTCCTCCTGAAGGTGCGAAGCAGAAAGTTGAGCTTCGTGTT
CAGAAGGTTATATCTGTGGGTACTGTTGATGCTGCTAAGTATCCATTGCCGAAGACTAAG
TTGACGCTTGAGTTTTTAAGGGATGTTGTTCATCTTCGATCCCGAACGAACACTATTTCT
GCTGTTGCTAGAATCCGTAATGCCTTAGCTTATGCCACCCATACATTCTTCCAAAACAAT
GGGTTTCTTTATATCCACACCCCAATAATCACAACAAGTGATTGTGAGGGTGCTGGTGAG
ATGTTCCAAGTTACTAGTTTGATTAGTGAAGCTGAAAAGTTGGAGAAGGAGCTGAAAGAG
AATCCTGCTCCTTCAGAATCTGACACTCAAGCTGCTGAGAAACTCGCCAAAGAGAAAGGT
GAGGTAGTTGCTCAGCTAAAAGCTAGTAAGGCGAGCATGGACAAAACTGATCCCAATATT
GCGGACATCAACAAGAAAATCAGTGCTGCAGTTGCCGAGCTACAACGAGCTAAAGAGAAT
CTCCTGAAGTTGCAAGAGAGATCTAAATTGGGAGAAAGATACAGACTCTCTGCTGGTATT
CCTAAAAAGGATGGAAAGATTGATTACTCTGAGGATTTTTTTGGACGACAAGCTTTCTTG
ACAGTGTCTGGCCAACTCCAAGTTGAAACCTATGCATGTGCACTTTCTAGTGTGTATACT
TTTGGACCAACTTTTCGAGCTGAACAGTCCCACACTACTCGGCATCTTGCAGAGTTCTGG
ATGGTGGAGCCTGAAATTGCTTTTGCTGATATCCAGGATGATATGAATTGTGCTGAGGCG
TATGTGAAGTTTCTGTGTCAGTGGTTACTTGACCATTGCCTTGATGACATGGAATTTATG
ACTAAATTTGTAGATAAAGATGCTCTGAGTAGACTTAGAATGGTTGCCTCATCGAACTGC
CATCGGATAACTTATACAGAAGCCATAGATATTCTTGAGGTAGCAGCCAAAGTGAAGAAA
TTTGAAAATAAAGTAGAGTGGGGGATTGACTTAGCATCTGAACATGAAAGATATTTGACC
GAAGAGCATTTTAAGGCACCTGTTATTGTGTTCAACTATCCAAAAGGGATAAAAGCATTT
TACATGAAGGTGAATGAAGACAACAAGACAGTTGCTGCCATGGATCTGCTAGTACCAAAG
GTGGGAGAACTAATTGGAGGAAGCCAAAGAGAAGAGAATTATGAAGTCCTCAGATCAAGG
ATACTGGATCTGGGTCTACCACTAGAGCCATATGAGTGGTATCTGGACCTGAGGCGCTAT
GGTACTGTAAAGCACAGTGGTTTCGGTTTAGGCTTTGAACGAATGATTCTGTTTGCCACT
GGGATAGAAAACATTCGGGATGTCATTCCCTTCCCTAGATATCCAGGGAGAGCCGATCTT
TAA

Peptide Sequence

PEP ID

Solyc10g080710.2.1
PEP Infomation

asparaginyl-tRNA synthetase
Sequence

MSVDSAPPVEKLTLTDVVEEARFSQRVPICSIVGRTDGGAGLAGNVVKIGGWVKTGREQG
KGSFAFLEVNDGSCPGNLQVIVDASVHKLGDLVLTGTCVHVEGELKVPPEGAKQKVELRV
QKVISVGTVDAAKYPLPKTKLTLEFLRDVVHLRSRTNTISAVARIRNALAYATHTFFQNN
GFLYIHTPIITTSDCEGAGEMFQVTSLISEAEKLEKELKENPAPSESDTQAAEKLAKEKG
EVVAQLKASKASMDKTDPNIADINKKISAAVAELQRAKENLLKLQERSKLGERYRLSAGI
PKKDGKIDYSEDFFGRQAFLTVSGQLQVETYACALSSVYTFGPTFRAEQSHTTRHLAEFW
MVEPEIAFADIQDDMNCAEAYVKFLCQWLLDHCLDDMEFMTKFVDKDALSRLRMVASSNC
HRITYTEAIDILEVAAKVKKFENKVEWGIDLASEHERYLTEEHFKAPVIVFNYPKGIKAF
YMKVNEDNKTVAAMDLLVPKVGELIGGSQREENYEVLRSRILDLGLPLEPYEWYLDLRRY
GTVKHSGFGLGFERMILFATGIENIRDVIPFPRYPGRADL*

Transcript Sequence

Transcript ID

Solyc10g080710.2.1
Transcript Infomation

asparaginyl-tRNA synthetase
Sequence

AATCGTAAAAAAAAAAATTGGACGAATATTTATATATACAAGTAGTGCGTTTCACTTTCA
ACTAGAATAACTAACTCAAAGGTCCCTAGGGTTTATTCAAACCCAAACAAATCCCACATT
TCTGTTTCTCAGCCGCCGAGCAACCAAAACGCCAAAATGTCAGTCGATTCAGCGCCGCCG
GTGGAAAAACTCACCCTAACCGACGTCGTAGAGGAGGCGAGATTCTCTCAACGCGTCCCG
ATCTGTTCAATCGTCGGCCGTACCGACGGAGGAGCTGGACTCGCCGGAAATGTTGTCAAA
ATCGGTGGTTGGGTCAAAACAGGAAGAGAACAGGGCAAGGGTTCATTCGCTTTCCTCGAA
GTGAATGACGGTTCATGCCCAGGGAATCTTCAAGTGATCGTTGATGCTTCAGTTCATAAG
CTTGGTGATTTGGTACTTACTGGTACTTGTGTACATGTGGAAGGTGAATTGAAGGTTCCT
CCTGAAGGTGCGAAGCAGAAAGTTGAGCTTCGTGTTCAGAAGGTTATATCTGTGGGTACT
GTTGATGCTGCTAAGTATCCATTGCCGAAGACTAAGTTGACGCTTGAGTTTTTAAGGGAT
GTTGTTCATCTTCGATCCCGAACGAACACTATTTCTGCTGTTGCTAGAATCCGTAATGCC
TTAGCTTATGCCACCCATACATTCTTCCAAAACAATGGGTTTCTTTATATCCACACCCCA
ATAATCACAACAAGTGATTGTGAGGGTGCTGGTGAGATGTTCCAAGTTACTAGTTTGATT
AGTGAAGCTGAAAAGTTGGAGAAGGAGCTGAAAGAGAATCCTGCTCCTTCAGAATCTGAC
ACTCAAGCTGCTGAGAAACTCGCCAAAGAGAAAGGTGAGGTAGTTGCTCAGCTAAAAGCT
AGTAAGGCGAGCATGGACAAAACTGATCCCAATATTGCGGACATCAACAAGAAAATCAGT
GCTGCAGTTGCCGAGCTACAACGAGCTAAAGAGAATCTCCTGAAGTTGCAAGAGAGATCT
AAATTGGGAGAAAGATACAGACTCTCTGCTGGTATTCCTAAAAAGGATGGAAAGATTGAT
TACTCTGAGGATTTTTTTGGACGACAAGCTTTCTTGACAGTGTCTGGCCAACTCCAAGTT
GAAACCTATGCATGTGCACTTTCTAGTGTGTATACTTTTGGACCAACTTTTCGAGCTGAA
CAGTCCCACACTACTCGGCATCTTGCAGAGTTCTGGATGGTGGAGCCTGAAATTGCTTTT
GCTGATATCCAGGATGATATGAATTGTGCTGAGGCGTATGTGAAGTTTCTGTGTCAGTGG
TTACTTGACCATTGCCTTGATGACATGGAATTTATGACTAAATTTGTAGATAAAGATGCT
CTGAGTAGACTTAGAATGGTTGCCTCATCGAACTGCCATCGGATAACTTATACAGAAGCC
ATAGATATTCTTGAGGTAGCAGCCAAAGTGAAGAAATTTGAAAATAAAGTAGAGTGGGGG
ATTGACTTAGCATCTGAACATGAAAGATATTTGACCGAAGAGCATTTTAAGGCACCTGTT
ATTGTGTTCAACTATCCAAAAGGGATAAAAGCATTTTACATGAAGGTGAATGAAGACAAC
AAGACAGTTGCTGCCATGGATCTGCTAGTACCAAAGGTGGGAGAACTAATTGGAGGAAGC
CAAAGAGAAGAGAATTATGAAGTCCTCAGATCAAGGATACTGGATCTGGGTCTACCACTA
GAGCCATATGAGTGGTATCTGGACCTGAGGCGCTATGGTACTGTAAAGCACAGTGGTTTC
GGTTTAGGCTTTGAACGAATGATTCTGTTTGCCACTGGGATAGAAAACATTCGGGATGTC
ATTCCCTTCCCTAGATATCCAGGGAGAGCCGATCTTTAATCCATACCGATAGACATGGAT
ACCTATTTATTTAGTTTTGAAATTATGACACCATTTTCTAAATTGTAATTGCTATTTAAA
AGTTCCAAACAAATTCAGATACAGGAAACCTGTATCATATTGTAATCTCTCAGGAGGGTT
TGGGGTGAGTGGCTGAGCGCGTTTGCAGTGTATTTCATCTAACACTTGCTGCTGGGTTTA
CAAAATATGCATTCTGGTTTTTAGTAAAACTGATTTTGTAGATGGCTTTGTTGGACATAT
CATATTTCTTTGTTATTGGAAATGCTGTCACTTTGTTTATGTGATTTTTTGGTTTGATTC
TGGAATTATGGCTTATATGTGAATGGTGCAATGTATTCAAATAGTTGAAACTATAGCTG