Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g080670.2.1
CDS Infomation	Transmembrane protein, putative (AHRD V3.3 *** A2Q5V9_MEDTR)
Sequence	ATGGATCTTCAAGAATGGGAACTTCTTTCTGATAATGGACTTCTTGAAGTACTCCATGAT GATAGAGACAAATTTTTGTCTATGGAGTATACTTCTAGTTCCAAAAAAGTGCCAAATCAA GTAGTAATTCCATTACTAATTCAACAAGAACCAAGTATACAAAAGCCCCAAGAAGATGAA GAAGTCATTAAAGAAGTTATCACCAAGGTTCCACTTGAGGATGAGGAGGATAAAAAGTCT CAAGTTTTCTTCAAGAAAATGAAGGAAAGTGAATTTGAAAACATGAAGTTGGATTCACCC AAGTTTAGTAACAAGACTAGTACTGTGTCTCAAATTGATTCAATGAGTTTCCCCTTTGAG GTTAAAGCTGAAGTCTTGGAAGTTGAAAATGAGAGTTTGATCAAGAAAAGGGATAGTAAT GAAGAGAAAAATAATGGTGGAGTTAATCTGTGGAACTGGAGATTGACTGGAATTGGTGCA ATTTGTTCATTTGGGGTTGCAGCTGCTGCTGTTACGATTTGTATCTTTATTGGAAATCAT CAAAAACAGAAACAGCATAAGCAGAATCAGAAGCTTAAATTCCAATTTTCTGATGACAAG AAAATGAAGCAAGTGGTTCAGCAGCCTGCAACAAAACTGAATGAAGCAATCTGTGGAGTT AAAGGATCAGTTCCTGTGATGAAGAAACACATCACAGACGTTGAAGGATTACTTTTACGC TCCTTAGAGCAAATTCAAGACTGTTTATCAGTTTCTTGA

Peptide Sequence

PEP ID	Solyc10g080670.2.1
PEP Infomation	Transmembrane protein, putative (AHRD V3.3 *** A2Q5V9_MEDTR)
Sequence	MDLQEWELLSDNGLLEVLHDDRDKFLSMEYTSSSKKVPNQVVIPLLIQQEPSIQKPQEDE EVIKEVITKVPLEDEEDKKSQVFFKKMKESEFENMKLDSPKFSNKTSTVSQIDSMSFPFE VKAEVLEVENESLIKKRDSNEEKNNGGVNLWNWRLTGIGAICSFGVAAAAVTICIFIGNH QKQKQHKQNQKLKFQFSDDKKMKQVVQQPATKLNEAICGVKGSVPVMKKHITDVEGLLLR SLEQIQDCLSVS*

Transcript Sequence

Transcript ID	Solyc10g080670.2.1
Transcript Infomation	Transmembrane protein, putative (AHRD V3.3 *** A2Q5V9_MEDTR)
Sequence	ACGTCTAGAGTGGTAAAAAGGAATTAGGACTCCTCTAAATTTCAAACTATTTAACCTCTA CTACTCTTTAACTCCCCTGCTTTCATTCATTGAGAAAAAAAAAATGGATCTTCAAGAATG GGAACTTCTTTCTGATAATGGACTTCTTGAAGTACTCCATGATGATAGAGACAAATTTTT GTCTATGGAGTATACTTCTAGTTCCAAAAAAGTGCCAAATCAAGTAGTAATTCCATTACT AATTCAACAAGAACCAAGTATACAAAAGCCCCAAGAAGATGAAGAAGTCATTAAAGAAGT TATCACCAAGGTTCCACTTGAGGATGAGGAGGATAAAAAGTCTCAAGTTTTCTTCAAGAA AATGAAGGAAAGTGAATTTGAAAACATGAAGTTGGATTCACCCAAGTTTAGTAACAAGAC TAGTACTGTGTCTCAAATTGATTCAATGAGTTTCCCCTTTGAGGTTAAAGCTGAAGTCTT GGAAGTTGAAAATGAGAGTTTGATCAAGAAAAGGGATAGTAATGAAGAGAAAAATAATGG TGGAGTTAATCTGTGGAACTGGAGATTGACTGGAATTGGTGCAATTTGTTCATTTGGGGT TGCAGCTGCTGCTGTTACGATTTGTATCTTTATTGGAAATCATCAAAAACAGAAACAGCA TAAGCAGAATCAGAAGCTTAAATTCCAATTTTCTGATGACAAGAAAATGAAGCAAGTGGT TCAGCAGCCTGCAACAAAACTGAATGAAGCAATCTGTGGAGTTAAAGGATCAGTTCCTGT GATGAAGAAACACATCACAGACGTTGAAGGATTACTTTTACGCTCCTTAGAGCAAATTCA AGACTGTTTATCAGTTTCTTGAATCGTTAGTGGATCAAACAACAGGTTTGCAGGTTCAAC AGAACTCGATATTTAGCCTTATATATATGTAAAAAGTTATAGCAAGTGTAGGTGAATTTA GATCTCAACTTAGAATTCACAACGTCTAAATTGTAGATCCTAGTATCTAAGCACATCATC ACTATACATGTCGTATATATATCTTATTCCAAATTTCTCATGAGTTTGTACTATTTGATA CAATAGGTGCTTCTGTGTGTACTTTAATTTCCATGTCGCTCGATTTCTTTTTCAAACTTC TTTGATGTGCATTACTTGAGTCGAGGTTTTTCAA