Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g080640.2.1
CDS Infomation

calmodulin-binding family protein (AHRD V3.3 *** AT3G13600.2)
Sequence

ATGGGAATAACATATTCATGTCCTTTCGCAAATTTTGACGATTCAGATACTAAATTCGAG
TCTTATTTAGTGAGAACACTGAGTTTTGGAACTGATGCTACAAAGAATGCTTTACCGCCT
ATCAATTTCAAAGACCAAAATCCTCAACAACCAAAAATGCACAAGTCTTACAGTTCTGGA
AAGATGATTCTCGAGGGAACTCTTAGCTATAAAAGACGGGAATTAGAGGCCAGGATTGGA
CTGACTTCATTTGATAATGATGAGAAGACGATGAGTCGATCAGACAGCCTTATGAGCAGT
GAAGAAAAGCATAACATGCCTGATGAAAACACTAAAATGATACCATTTGTATGTGAGAAA
CAAAGAGATGAGGCTGCAGTGAAGTTGCAGAAAACATACAAAAGTTTTCGTACTAGAAGA
CGACTAGCAGATTGTGCTATTCTGGTTGAGCAGAGATGGTGGAAGTTATTAGATTCCGTT
GAACTCAAGCATAGTTCTATATCATTCTTTGACATTGAGAAACCCCAAACCGCTTTTTCT
CGTTGGTCAAGAGCTTTAACAAGAGCTGCTAAGGTCGGTAAGGGTCTGTCGAAAGATGAA
AAAGCCTGTAAGCTTGCTTTACAGCATTGGCTTGAAGCAATCGATCCTCGACATCGTTAT
GGTCATAATCTTCATTTCTATTACACCAAGTGGCTCCAAGTTGACAGTAGACAACCCTTC
TTCTATTGGTTGGACATAGGTGAAGGTAAAGAAGTGAATCTTGAGAAGTGCCCTAGATCA
AAACTTCATCAACAATGCATTAAGTATCTCGGTCCGGTAGAGAGGGAGGCATATGAAGTT
GTAATTGTGGATGGAAAATTCATCTACAAGCAGAGCGGGAGGGTTCTTGATACGAGGGGA
GGACCGGAAGAAGCCAAGTGGATCTTTGTGCTAAGCGTATCGAAGGACTTATACATTGGG
ATGAAGCAAAAAGGCACATTTCAGCATTCAAGTTTCTTAGCTGGTGGAGCTACATTATCT
GCAGGCAGATTAGTGATAGAAGACGGTACTCTAAAGGCTGTCTGGCCACACAGTGGACAT
TATCTTCCAACGAAGGAGAATTTCGAAGAATTTATGACATTTCTTGAACAACACAACATT
GATGTCACTATTATTCAGCTGAATTTATTCGACGATGAAGATGAAGAAGACTACGAAGAT
ACTATCCCTCCAGAAAAGATAATGAAGAGAATAGATACACATAGAAGAACAAAGTCATTC
CAGTTAGCTCATCAATTATCTTGTAGATGGACAACAGGAGCTGGACCTCGAATCGGATGT
ATGAGGGACTATCCAGCTGAACTCCAATTTCGTGTTATGGAGGACGTGTGTTTGTCTCCA
AGAACTACTACATTTCAAACTCCACCAAAATATGCTAGACCTCCTAGCATCTTTTCTATC
GAAACAACTGAAGGAAGAAGACGTACTGGTTCTGAATCA

Peptide Sequence

PEP ID

Solyc10g080640.2.1
PEP Infomation

calmodulin-binding family protein (AHRD V3.3 *** AT3G13600.2)
Sequence

MGITYSCPFANFDDSDTKFESYLVRTLSFGTDATKNALPPINFKDQNPQQPKMHKSYSSG
KMILEGTLSYKRRELEARIGLTSFDNDEKTMSRSDSLMSSEEKHNMPDENTKMIPFVCEK
QRDEAAVKLQKTYKSFRTRRRLADCAILVEQRWWKLLDSVELKHSSISFFDIEKPQTAFS
RWSRALTRAAKVGKGLSKDEKACKLALQHWLEAIDPRHRYGHNLHFYYTKWLQVDSRQPF
FYWLDIGEGKEVNLEKCPRSKLHQQCIKYLGPVEREAYEVVIVDGKFIYKQSGRVLDTRG
GPEEAKWIFVLSVSKDLYIGMKQKGTFQHSSFLAGGATLSAGRLVIEDGTLKAVWPHSGH
YLPTKENFEEFMTFLEQHNIDVTIIQLNLFDDEDEEDYEDTIPPEKIMKRIDTHRRTKSF
QLAHQLSCRWTTGAGPRIGCMRDYPAELQFRVMEDVCLSPRTTTFQTPPKYARPPSIFSI
ETTEGRRRTGSES

Transcript Sequence

Transcript ID

Solyc10g080640.2.1
Transcript Infomation

calmodulin-binding family protein (AHRD V3.3 *** AT3G13600.2)
Sequence

GGATATGGGAATAACATATTCATGTCCTTTCGCAAATTTTGACGATTCAGATACTAAATT
CGAGTCTTATTTAGTGAGAACACTGAGTTTTGGAACTGATGCTACAAAGAATGCTTTACC
GCCTATCAATTTCAAAGACCAAAATCCTCAACAACCAAAAATGCACAAGTCTTACAGTTC
TGGAAAGATGATTCTCGAGGGAACTCTTAGCTATAAAAGACGGGAATTAGAGGCCAGGAT
TGGACTGACTTCATTTGATAATGATGAGAAGACGATGAGTCGATCAGACAGCCTTATGAG
CAGTGAAGAAAAGCATAACATGCCTGATGAAAACACTAAAATGATACCATTTGTATGTGA
GAAACAAAGAGATGAGGCTGCAGTGAAGTTGCAGAAAACATACAAAAGTTTTCGTACTAG
AAGACGACTAGCAGATTGTGCTATTCTGGTTGAGCAGAGATGGTGGAAGTTATTAGATTC
CGTTGAACTCAAGCATAGTTCTATATCATTCTTTGACATTGAGAAACCCCAAACCGCTTT
TTCTCGTTGGTCAAGAGCTTTAACAAGAGCTGCTAAGGTCGGTAAGGGTCTGTCGAAAGA
TGAAAAAGCCTGTAAGCTTGCTTTACAGCATTGGCTTGAAGCAATCGATCCTCGACATCG
TTATGGTCATAATCTTCATTTCTATTACACCAAGTGGCTCCAAGTTGACAGTAGACAACC
CTTCTTCTATTGGTTGGACATAGGTGAAGGTAAAGAAGTGAATCTTGAGAAGTGCCCTAG
ATCAAAACTTCATCAACAATGCATTAAGTATCTCGGTCCGGTAGAGAGGGAGGCATATGA
AGTTGTAATTGTGGATGGAAAATTCATCTACAAGCAGAGCGGGAGGGTTCTTGATACGAG
GGGAGGACCGGAAGAAGCCAAGTGGATCTTTGTGCTAAGCGTATCGAAGGACTTATACAT
TGGGATGAAGCAAAAAGGCACATTTCAGCATTCAAGTTTCTTAGCTGGTGGAGCTACATT
ATCTGCAGGCAGATTAGTGATAGAAGACGGTACTCTAAAGGCTGTCTGGCCACACAGTGG
ACATTATCTTCCAACGAAGGAGAATTTCGAAGAATTTATGACATTTCTTGAACAACACAA
CATTGATGTCACTATTATTCAGCTGAATTTATTCGACGATGAAGATGAAGAAGACTACGA
AGATACTATCCCTCCAGAAAAGATAATGAAGAGAATAGATACACATAGAAGAACAAAGTC
ATTCCAGTTAGCTCATCAATTATCTTGTAGATGGACAACAGGAGCTGGACCTCGAATCGG
ATGTATGAGGGACTATCCAGCTGAACTCCAATTTCGTGTTATGGAGGACGTGTGTTTGTC
TCCAAGAACTACTACATTTCAAACTCCACCAAAATATGCTAGACCTCCTAGCATCTTTTC
TATCGAAACAACTGAAGGAAGAAGACGTACTGGTTCTGAATCA