Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g080570.2.1
CDS Infomation	E3 ubiquitin-protein ligase (AHRD V3.3 *** K4D2U7_SOLLC)
Sequence	ATGGCTCCTGGTGGTGGTGTTAGTAGTTGCAAAGAACTTGTAGAATCATGGCAAAAAGTT TCAAGATTTGATACAACAAATATACATGATGAGCTAGAGAAAAGTATTACATGTATTGGT GAAAAGTTTCAAAAGTGTTCAATCCATGAGTTGCTTGAGTGTCCAATTTGTAGAAGGTTC ATGTATCCTCCATTTTACCAGTGTCCAAATGGTCATACACTATGCACAAACTGCAAAATT GAAGCAACAGATTTCTGTCCAACTTGCAAAGTTGAACTTGGAAACATAAGGTGTTTAGCC TTAGAGAAAGTAGCAGAGTCACTTGAACTGCCCTGCAGACATCAAAATCTTGGCTGTCAC AAAATATTACCTTACTATCGAAAGCTCAAACACGAAAGACATTGCAAATTTAGGCCTTAC CACTGTCCTTACGCGGGATCAGAATGCTCGATAAAAGGGGACATTCCAACACTCATGTTG CATCTCAAGGAGGATCACAAAGTTGATATGCATAGTGGCTGCACGTTCAATCATCGATAT GTTAAATCAAATGCACAACAAGTTGACAATGCAATATGGATGCTAACAGTTTTCGACTGT TTTGGAAGACAATTTGTCTTACATTTTGAGGCGTTTTCACTAGGTATGACACCGGTATAC ATAGCTTTTCTGCGATTCATGGGAGAGGACAACGAGGCCAAAATGTTCAACTATAGTCTA CAAGTTGGTGGTTATGGCCGTAAGTTAACATGGCAAGGTGTTCCTAGGAGTATACGAGAC AGTCATGGTAAAGTCCGCGATTGTCAAGATGGACTAATTATTCCGAGAAGCTTAGCATTT TTCTTCTCAGGTGGGAACGGAGAAGAGCTTACGTTGAAGGTCATAGGTCGTATATGGAAA GAGAGTGCCTAA

Peptide Sequence

PEP ID	Solyc10g080570.2.1
PEP Infomation	E3 ubiquitin-protein ligase (AHRD V3.3 *** K4D2U7_SOLLC)
Sequence	MAPGGGVSSCKELVESWQKVSRFDTTNIHDELEKSITCIGEKFQKCSIHELLECPICRRF MYPPFYQCPNGHTLCTNCKIEATDFCPTCKVELGNIRCLALEKVAESLELPCRHQNLGCH KILPYYRKLKHERHCKFRPYHCPYAGSECSIKGDIPTLMLHLKEDHKVDMHSGCTFNHRY VKSNAQQVDNAIWMLTVFDCFGRQFVLHFEAFSLGMTPVYIAFLRFMGEDNEAKMFNYSL QVGGYGRKLTWQGVPRSIRDSHGKVRDCQDGLIIPRSLAFFFSGGNGEELTLKVIGRIWK ESA*

Transcript Sequence

Transcript ID	Solyc10g080570.2.1
Transcript Infomation	E3 ubiquitin-protein ligase (AHRD V3.3 *** K4D2U7_SOLLC)
Sequence	TGAATTTAATTGTATTGAATACTAACATAGTCAGTAAGGATTCATGTAACCGGTTAGTAG CAAAACCAGGGAGAGTCAAAAAATAAATAAATAAACACACGAAGATATGGAAATGATTCA ACGTAACGTCTATATATCAAAACTTTGTTTTAGTACATTGATATAGCCGATTCTAATTTG CTCGTGAGTTGGGACTGGGGCGTAGTTGTTAGTATTATTATTATTATATTAAAATAGTCT TTTCCAACTATATACCAAGTCAAAGTGAGCATCTGGACTTCCACAAGTATATATGGTCTT TCTTAGCGTATTATTAACGTTGTTTCCTCTTTTTGATTTTCTAGTCTTTCAAGTTTTTTC TACCATAGATTTGGACTTATAAGTATTTAATCTTTGGTTATTTTAATTTATGTTAAATTA AAGTAATATTGTCTAAGTTTTTTATTTTTTTACAAAATATGGCTCCTGGTGGTGGTGTTA GTAGTTGCAAAGAACTTGTAGAATCATGGCAAAAAGTTTCAAGATTTGATACAACAAATA TACATGATGAGCTAGAGAAAAGTATTACATGTATTGGTGAAAAGTTTCAAAAGTGTTCAA TCCATGAGTTGCTTGAGTGTCCAATTTGTAGAAGGTTCATGTATCCTCCATTTTACCAGT GTCCAAATGGTCATACACTATGCACAAACTGCAAAATTGAAGCAACAGATTTCTGTCCAA CTTGCAAAGTTGAACTTGGAAACATAAGGTGTTTAGCCTTAGAGAAAGTAGCAGAGTCAC TTGAACTGCCCTGCAGACATCAAAATCTTGGCTGTCACAAAATATTACCTTACTATCGAA AGCTCAAACACGAAAGACATTGCAAATTTAGGCCTTACCACTGTCCTTACGCGGGATCAG AATGCTCGATAAAAGGGGACATTCCAACACTCATGTTGCATCTCAAGGAGGATCACAAAG TTGATATGCATAGTGGCTGCACGTTCAATCATCGATATGTTAAATCAAATGCACAACAAG TTGACAATGCAATATGGATGCTAACAGTTTTCGACTGTTTTGGAAGACAATTTGTCTTAC ATTTTGAGGCGTTTTCACTAGGTATGACACCGGTATACATAGCTTTTCTGCGATTCATGG GAGAGGACAACGAGGCCAAAATGTTCAACTATAGTCTACAAGTTGGTGGTTATGGCCGTA AGTTAACATGGCAAGGTGTTCCTAGGAGTATACGAGACAGTCATGGTAAAGTCCGCGATT GTCAAGATGGACTAATTATTCCGAGAAGCTTAGCATTTTTCTTCTCAGGTGGGAACGGAG AAGAGCTTACGTTGAAGGTCATAGGTCGTATATGGAAAGAGAGTGCCTAAGCTATTGTAT AGTGTCGACTCTTCAGAAGATCACTTTTGAAGAGAACGGTTGTGTATGGTACGAGGGAAA AACACGTTTTCCCCTGTACCAAACACAAACCAAAATATGTAAGTTGGAAGTCATAGTACT CTAATTTGAATGAACTAAAGTTTTGATTTGTTCATTTGGAAAAAAAAATATGTCATTCTA ACCTTTCATTTCAGTCTAAAAAGTTGATTTTTTCAGCAAAGTTCTCTTTATAAAAGAAAT GGTCAATAAGCAATGACAGTATCTGGAAAATAAGCACCGCCTTTTTTCCAATCCCGAGCT TTTCCCTTCCCCACCTTGATAACACAAGAAAAATTATGAACCTCGATTGTAACTAGTCAG ACCTCATTATAACAATAATC