Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g080115.1.1
CDS Infomation	Cytoplasmic tRNA 2-thiolation protein 2 (AHRD V3.3 *** K4D2Q2_SOLLC)
Sequence	ATGGCGTGCAACTCAGGGACTTGCCAGTCCGGTTGTTACAGAGATGATTCTTCCGTCGGA GCAGAAGAGTCGCCGCCGCTAACTAAGAAAACAGAAGTTTCAAACGGAGTTGTCAACAGT AGAAGGAGCACCGAACATTTGGATGATGGAATATGTCTCAAATGTAAGGTTAACAGAACC ATCGCCGCTGCTGACGGCGGTGGTGATTTTGGTGGAGGAGATGCAGGAAGGTTCTGTGCT GATTGCTTCCGCAGTAATCTATTTGGGAAGTTCAGACTTGCTGTCACTGCTAATGCTATG ATTTCGCCGTCGGATAACGTCCTTGTTGCCTTCTCTGGCGGTACTTGTTCCAGGGTTCAG GGTTTAACGATTCTGTTGATTTTTGGTCCTGATTCGTCAGTTTATTTGTTTGACATGTAC TGGTGGGTAGCTCTGCAATTTACACATGAGATGCAAAGCAAAGCTCAGAAGAACTATGAT GCCAGTAGAGATAGAGCATTACCAGTTTTTGGTGTTGGGGTTGCTTTTATTGATGAAAAA GCCATTTCTGCTGTCTCATCTGATAACCTTGACAGAGCTGTTGAGGAGATGGAACTTATT GTGTCAGATTTGGCTCCACCTGTGAAACAATTCCATGTAGTTCCAACAGAGGCTATTTAT TCACTGGATGCTGGTGATTCAAAAGATAGACTGAATGAATTAATAAACACTGTTAATGAT GTCACAGGAAAAGAGGATTTGTTGGAGCATTTTCGCATGCTCTCCTTGCAAAAGATAGCT ATAGAGAATGGATATACCAAAATTCTACTTGGAACGTGTACATCAAGAATAGCTTGTCAT GTACTTGAAGCAACTGTCAAGGGTAGAGGTTATTCTTTAGCAGCTGACATCCAGTATGTT GATGCAAGGTGGAAGATACCTGTGGTTCTTCCCCTCCGTGATTGTCCTATTCATGAGTTG AACATGCTTTGCAGCCTCGACAGGTTCGATGCACTTGAAGTCTGA

Peptide Sequence

PEP ID	Solyc10g080115.1.1
PEP Infomation	Cytoplasmic tRNA 2-thiolation protein 2 (AHRD V3.3 *** K4D2Q2_SOLLC)
Sequence	MACNSGTCQSGCYRDDSSVGAEESPPLTKKTEVSNGVVNSRRSTEHLDDGICLKCKVNRT IAAADGGGDFGGGDAGRFCADCFRSNLFGKFRLAVTANAMISPSDNVLVAFSGGTCSRVQ GLTILLIFGPDSSVYLFDMYWWVALQFTHEMQSKAQKNYDASRDRALPVFGVGVAFIDEK AISAVSSDNLDRAVEEMELIVSDLAPPVKQFHVVPTEAIYSLDAGDSKDRLNELINTVND VTGKEDLLEHFRMLSLQKIAIENGYTKILLGTCTSRIACHVLEATVKGRGYSLAADIQYV DARWKIPVVLPLRDCPIHELNMLCSLDRFDALEV*

Transcript Sequence

Transcript ID	Solyc10g080115.1.1
Transcript Infomation	Cytoplasmic tRNA 2-thiolation protein 2 (AHRD V3.3 *** K4D2Q2_SOLLC)
Sequence	TGGCCCAACAATAGAAATTTTACAAAACAAATTGGCTCTCTCAAATACACTTTACTTTCT AGCCAAAAATGGCGTGCAACTCAGGGACTTGCCAGTCCGGTTGTTACAGAGATGATTCTT CCGTCGGAGCAGAAGAGTCGCCGCCGCTAACTAAGAAAACAGAAGTTTCAAACGGAGTTG TCAACAGTAGAAGGAGCACCGAACATTTGGATGATGGAATATGTCTCAAATGTAAGGTTA ACAGAACCATCGCCGCTGCTGACGGCGGTGGTGATTTTGGTGGAGGAGATGCAGGAAGGT TCTGTGCTGATTGCTTCCGCAGTAATCTATTTGGGAAGTTCAGACTTGCTGTCACTGCTA ATGCTATGATTTCGCCGTCGGATAACGTCCTTGTTGCCTTCTCTGGCGGTACTTGTTCCA GGGTTCAGGGTTTAACGATTCTGTTGATTTTTGGTCCTGATTCGTCAGTTTATTTGTTTG ACATGTACTGGTGGGTAGCTCTGCAATTTACACATGAGATGCAAAGCAAAGCTCAGAAGA ACTATGATGCCAGTAGAGATAGAGCATTACCAGTTTTTGGTGTTGGGGTTGCTTTTATTG ATGAAAAAGCCATTTCTGCTGTCTCATCTGATAACCTTGACAGAGCTGTTGAGGAGATGG AACTTATTGTGTCAGATTTGGCTCCACCTGTGAAACAATTCCATGTAGTTCCAACAGAGG CTATTTATTCACTGGATGCTGGTGATTCAAAAGATAGACTGAATGAATTAATAAACACTG TTAATGATGTCACAGGAAAAGAGGATTTGTTGGAGCATTTTCGCATGCTCTCCTTGCAAA AGATAGCTATAGAGAATGGATATACCAAAATTCTACTTGGAACGTGTACATCAAGAATAG CTTGTCATGTACTTGAAGCAACTGTCAAGGGTAGAGGTTATTCTTTAGCAGCTGACATCC AGTATGTTGATGCAAGGTGGAAGATACCTGTGGTTCTTCCCCTCCGTGATTGTCCTATTC ATGAGTTGAACATGCTTTGCAGCCTCGACAGGTTCGATGCACTTGAAGTCTGA