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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g079860.2.1
CDS Infomation

LEQB L.esculentum TomQ'b beta(1,3)glucanase
Sequence

ATGGCTTGTACCAAACTACATTTTCCAATTACCGCGACGACTCTGCTGGTGATACTTATA
TTGGCTACCTTAGATTTCACAGGTGCACAAACAGGAGTTTGTTATGGAAGAAATGGGAAT
GGATTACCATCTCCAGCAGATGTTGTGGCTCTATGTAATCGAAACAATATACGAAGAATG
AGAATCTATGATCCTCATCAACCAACTCTCCAAGCCCTCAGAGGCTCGAATATTGAACTC
ATACTAGGCGTGCCAAATCCTGACCTTCAGAATATCGCGTCTAGCCAAGCTAACGCGAAT
GCTTGGGTCCAAAACAATGTTAGGAACTATGGTAATGTTAAGTTCAGGTATATAGCTGTT
GGAAATGAAGTTAGTCCATTAAATGGCAACGCGCAGTATGTGCCTTTCGTGATCAATGCA
ATGAGAAACATTCAGAACGCGATTTCTGGCGCTGGTCTAGGAAACCAGATCAAAGTTTCT
ACTGCTATTGAAACCGAACTTACTACAGATACTTACCCTCCATCAAGAGGCAAGTTTAAA
GACAACGTCCGAGGGTATGTTGATCCCATCATTAGATTCTTAGTAGCTAACCGCTCACCT
TTACTTGTCAACATATATCCATACTTTGCAATAGCAAACAATCAAGCTATTAAGCTTGAC
TACGCGTTGTTTACATCCCCTGGAGTTGTTGTGAATGATAATGGAAGAGAATACCGCAAC
TTATTTGATGCACTCTTAGATGCTACATACTCGGCCCTTGAAAAAGCCGGTGGTTCATCT
TTGGATATCGTTGTATCAGAGAGCGGTTGGCCTTCAGCTGGAGCAGGGCAATTGACCTCT
ATTGACAACGCGAGGACTTACAACAACAACTTGATTAGACATGTGAAAAGAGGGAGTCCG
AAAAGACCATCAAAGCCTATTGAGGCTTACATTTTCGCCTTGTTTAATGAAAATCTCAAG
AGCCCTGAAATTGAGAAACATTTTGGACTGTTTACACCAAACAGGCAGCCAAAATACCCA
ATCAGTTTCAACTAG

Peptide Sequence

PEP ID

Solyc10g079860.2.1
PEP Infomation

LEQB L.esculentum TomQ'b beta(1,3)glucanase
Sequence

MACTKLHFPITATTLLVILILATLDFTGAQTGVCYGRNGNGLPSPADVVALCNRNNIRRM
RIYDPHQPTLQALRGSNIELILGVPNPDLQNIASSQANANAWVQNNVRNYGNVKFRYIAV
GNEVSPLNGNAQYVPFVINAMRNIQNAISGAGLGNQIKVSTAIETELTTDTYPPSRGKFK
DNVRGYVDPIIRFLVANRSPLLVNIYPYFAIANNQAIKLDYALFTSPGVVVNDNGREYRN
LFDALLDATYSALEKAGGSSLDIVVSESGWPSAGAGQLTSIDNARTYNNNLIRHVKRGSP
KRPSKPIEAYIFALFNENLKSPEIEKHFGLFTPNRQPKYPISFN*

Transcript Sequence

Transcript ID

Solyc10g079860.2.1
Transcript Infomation

LEQB L.esculentum TomQ'b beta(1,3)glucanase
Sequence

TTTCATCCACTGCTCAATTTTCTTTTCTTTGCCAATTACCATGGCTTGTACCAAACTACA
TTTTCCAATTACCGCGACGACTCTGCTGGTGATACTTATATTGGCTACCTTAGATTTCAC
AGGTGCACAAACAGGAGTTTGTTATGGAAGAAATGGGAATGGATTACCATCTCCAGCAGA
TGTTGTGGCTCTATGTAATCGAAACAATATACGAAGAATGAGAATCTATGATCCTCATCA
ACCAACTCTCCAAGCCCTCAGAGGCTCGAATATTGAACTCATACTAGGCGTGCCAAATCC
TGACCTTCAGAATATCGCGTCTAGCCAAGCTAACGCGAATGCTTGGGTCCAAAACAATGT
TAGGAACTATGGTAATGTTAAGTTCAGGTATATAGCTGTTGGAAATGAAGTTAGTCCATT
AAATGGCAACGCGCAGTATGTGCCTTTCGTGATCAATGCAATGAGAAACATTCAGAACGC
GATTTCTGGCGCTGGTCTAGGAAACCAGATCAAAGTTTCTACTGCTATTGAAACCGAACT
TACTACAGATACTTACCCTCCATCAAGAGGCAAGTTTAAAGACAACGTCCGAGGGTATGT
TGATCCCATCATTAGATTCTTAGTAGCTAACCGCTCACCTTTACTTGTCAACATATATCC
ATACTTTGCAATAGCAAACAATCAAGCTATTAAGCTTGACTACGCGTTGTTTACATCCCC
TGGAGTTGTTGTGAATGATAATGGAAGAGAATACCGCAACTTATTTGATGCACTCTTAGA
TGCTACATACTCGGCCCTTGAAAAAGCCGGTGGTTCATCTTTGGATATCGTTGTATCAGA
GAGCGGTTGGCCTTCAGCTGGAGCAGGGCAATTGACCTCTATTGACAACGCGAGGACTTA
CAACAACAACTTGATTAGACATGTGAAAAGAGGGAGTCCGAAAAGACCATCAAAGCCTAT
TGAGGCTTACATTTTCGCCTTGTTTAATGAAAATCTCAAGAGCCCTGAAATTGAGAAACA
TTTTGGACTGTTTACACCAAACAGGCAGCCAAAATACCCAATCAGTTTCAACTAGCTAGA
CTATGCTACGGAATAAGAGTTAGTCGATCTTTTCTTCTTATAATATGTAGTTGAATAATC
GAATCGTTGCTCAACTTGAAAACAGAGCAACCCTTCGCATGATATGTACTCATCCTACAT
GCTTATATAAGGCAATTATTTCTACTAACTCAGGTTTGAAACTATTTCTCGAAA