Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g079630.1.1
CDS Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G50940.1)
Sequence

ATGTCTTCTTCCAGTGAATCAAATTTAGCAATTGCCAAAACTGTAATATCAGCAATTGGC
TCAGCTGCTGCAATGTCCATGTTGGTACATAATCTCCCACCAGAAGTTCAAGATTACCTC
TTTTTCGGCCTCAGGCACGTATTTATTAAATTCTCGAATCAACTAACTATGGTGATTGAC
GAATTTGATGGAATGATGAGCAATGAAGTATACGAAGCAGCTCAAATTTACTTAGGCACG
AAGCTATCTCCTGATACTCGTCGTTTCAAAATTAGCAAATCTGAGAAGGAGAAGAGTTTC
AACACGAGCATGGAAAGAAATGAGGAGGTCATAGACTATTACAAAGGTCAAAAGTTCAAG
TGGATTTGGGTGTGTAAACAAATTCAAACATCAAGAGAGTCGTTTTACAATCCTCGCGAC
ATCAACTCTACTATGAGGTCTGAGGTAAGATCCTACGAACTCATGTTTCATCGAAAAAGC
AAGGACTTTGTCCTTGACTGCTACTTGCCTTACATTATCAACGAGGCGAAATTGCAATAT
CTTGAAACCAAGACACTGAAAATCCACACTATGGATTATGAGAATATGCATGATCTTAGT
GAAGTGTGGACACCGGTGAGTCTTGATCACCCCGCGACCTTTGAGACATTAGCATTGGAC
TCAGAGCAAAAAGATGAGATTTTGAAGGATTTGGATAGATTCGTGAAGAGGAAAGAGTAT
TATAGGAAAGTTGGGAAGGCGTGGAAAAGAGGGTATTTGTTGTATGGTCCTCCGGGGACA
GGAAAGTCTAGTTTGATTGCAGCTATGGCGAATTACTTGAACTTTGATATATATGATTTG
GAGTTGACAGAGGTGAAGAAGAACTCGGACTTAAGGAGGTTGCTTGTGGCAACCGCTAAT
AAGTCCATTTTGGTGGTGGAAGATATCGATGCTACTATTGATTTGCAAGAGAAGTTGTCT
AGTCGCGCAGCTGCTCCTTCAAATGACTCTCATGAGGAAGAAAGCAAGGTGACACTATCC
GGTTTGCTGAACTTCATCGATGGATTATGGTCAAGTTGTGGCGATGAACGAATAATAATT
TTCACAACGAATCATGTGGAAAAGCTCGATCCTGCATTGTTGCGACCAGGACGAATGGAC
GTACACATTCACATGTCATATTGCACTCCTTGTGGCTTCAAACTTCTTGCTTCCAATTAC
CTTGGGATTACAGAGCATCAACTTTTTGAAGAAATTGAGAACTTAATAGGAGCCACCGCG
GTGACACCGGCTGAGGTGGCTGAGAAGCTGATGAAGGATGACGATGTTGACATTGCACTT
AAAAGCTTGATTGATTTTCTTCATTTGAAGGAGAAAGAACATGAAGATATCGAGGTTGAG
GAAAAAGAAAATGAGTAG

Peptide Sequence

PEP ID

Solyc10g079630.1.1
PEP Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G50940.1)
Sequence

MSSSSESNLAIAKTVISAIGSAAAMSMLVHNLPPEVQDYLFFGLRHVFIKFSNQLTMVID
EFDGMMSNEVYEAAQIYLGTKLSPDTRRFKISKSEKEKSFNTSMERNEEVIDYYKGQKFK
WIWVCKQIQTSRESFYNPRDINSTMRSEVRSYELMFHRKSKDFVLDCYLPYIINEAKLQY
LETKTLKIHTMDYENMHDLSEVWTPVSLDHPATFETLALDSEQKDEILKDLDRFVKRKEY
YRKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDIYDLELTEVKKNSDLRRLLVATAN
KSILVVEDIDATIDLQEKLSSRAAAPSNDSHEEESKVTLSGLLNFIDGLWSSCGDERIII
FTTNHVEKLDPALLRPGRMDVHIHMSYCTPCGFKLLASNYLGITEHQLFEEIENLIGATA
VTPAEVAEKLMKDDDVDIALKSLIDFLHLKEKEHEDIEVEEKENE*

Transcript Sequence

Transcript ID

Solyc10g079630.1.1
Transcript Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G50940.1)
Sequence

ATGTCTTCTTCCAGTGAATCAAATTTAGCAATTGCCAAAACTGTAATATCAGCAATTGGC
TCAGCTGCTGCAATGTCCATGTTGGTACATAATCTCCCACCAGAAGTTCAAGATTACCTC
TTTTTCGGCCTCAGGCACGTATTTATTAAATTCTCGAATCAACTAACTATGGTGATTGAC
GAATTTGATGGAATGATGAGCAATGAAGTATACGAAGCAGCTCAAATTTACTTAGGCACG
AAGCTATCTCCTGATACTCGTCGTTTCAAAATTAGCAAATCTGAGAAGGAGAAGAGTTTC
AACACGAGCATGGAAAGAAATGAGGAGGTCATAGACTATTACAAAGGTCAAAAGTTCAAG
TGGATTTGGGTGTGTAAACAAATTCAAACATCAAGAGAGTCGTTTTACAATCCTCGCGAC
ATCAACTCTACTATGAGGTCTGAGGTAAGATCCTACGAACTCATGTTTCATCGAAAAAGC
AAGGACTTTGTCCTTGACTGCTACTTGCCTTACATTATCAACGAGGCGAAATTGCAATAT
CTTGAAACCAAGACACTGAAAATCCACACTATGGATTATGAGAATATGCATGATCTTAGT
GAAGTGTGGACACCGGTGAGTCTTGATCACCCCGCGACCTTTGAGACATTAGCATTGGAC
TCAGAGCAAAAAGATGAGATTTTGAAGGATTTGGATAGATTCGTGAAGAGGAAAGAGTAT
TATAGGAAAGTTGGGAAGGCGTGGAAAAGAGGGTATTTGTTGTATGGTCCTCCGGGGACA
GGAAAGTCTAGTTTGATTGCAGCTATGGCGAATTACTTGAACTTTGATATATATGATTTG
GAGTTGACAGAGGTGAAGAAGAACTCGGACTTAAGGAGGTTGCTTGTGGCAACCGCTAAT
AAGTCCATTTTGGTGGTGGAAGATATCGATGCTACTATTGATTTGCAAGAGAAGTTGTCT
AGTCGCGCAGCTGCTCCTTCAAATGACTCTCATGAGGAAGAAAGCAAGGTGACACTATCC
GGTTTGCTGAACTTCATCGATGGATTATGGTCAAGTTGTGGCGATGAACGAATAATAATT
TTCACAACGAATCATGTGGAAAAGCTCGATCCTGCATTGTTGCGACCAGGACGAATGGAC
GTACACATTCACATGTCATATTGCACTCCTTGTGGCTTCAAACTTCTTGCTTCCAATTAC
CTTGGGATTACAGAGCATCAACTTTTTGAAGAAATTGAGAACTTAATAGGAGCCACCGCG
GTGACACCGGCTGAGGTGGCTGAGAAGCTGATGAAGGATGACGATGTTGACATTGCACTT
AAAAGCTTGATTGATTTTCTTCATTTGAAGGAGAAAGAACATGAAGATATCGAGGTTGAG
GAAAAAGAAAATGAGTAG