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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g079460.1.1
CDS Infomation

BTB/POZ ankyrin repeat protein (AHRD V3.3 *** G8GTN4_MEDTR)
Sequence

ATGAATACTCTTGAAGATTCCTTAAAAACTCTCTCTTTAGATTATCTAAATCTTCTCATC
AATGGTCAAGCTTTTAGTGATGTTACTTTTAGTGTTGAAGGTCGTTTAATACATGCTCAT
AGATGCATCTTAGCTGCTAGAAGTCTCTTCTTCCGCAAATTCTTCTGCGGGCCGGAGTCA
GCATCTGTCTCCGGCCCGCGGTTGGGCCCGTTCGGCGTTGGCGCTGGATTAGCGTCGTCG
CCGAGGGGCACAACAAGTTGTTCACAAGTAGTAATACCTGTGAACACTGTAGGGTATGAG
GTTTTTTTGTTGATGTTACAATTTTTGTATAGTGGACAAGTTTCAATTGTGCCACAAAAA
CATGAACCAAGGCCTAATTGTGGTGAAAGAAACTGTTGGCATACACATTGCACATCAGCC
GTTGATCTTGCACTGGATACACTCTCAGCCGCTAGATCTTTTGGAGTTGAACAACTTGCT
TTGCTTACTCAGAAGCATTTGATAAGCATGGTGGAAAAAGCTTCAATTGAGGATGTGATG
AAAGTTTTAATAGCTTCAAGAAAACAAGACATGCATCAACTTTGGACTACTTGTTCTCAT
TTGGTTGCTAAATCAGGTCTCCCACCTGAAATCCTAGCCAAACACCTCCCTATTGATGTT
GTTGCCAAAATCGAAGACCTTCGTCTCAAATCCTCTATATCGAGAAGATCTTTAATCCCT
CATCATCATCACAACCATCAACATCAACATCAAATGTCCTCGAACATTGAGCTCGAGGAC
CAGAAGATCCGACGAATGAGACGAGCGCTCGATTCGTCGGACGTGGAATTAGTCAAACTT
ATGGTAATGGGAGAAGGTTTGAATCTTGATGAGTCACTCGCGTTACATTACGCGGTTGAA
AATTGTAGCCGCGAAGTTGTAAAGGCTTTACTTGAGCTCGGTGCGGCCGATGTAAATTAC
CAGGCCGGGCCGAGCTGTAAAAGCCCGTTACACTTAGCGGCCGAAATGGTCTCACCGGAT
ATGGTTGCGGTTCTACTAGATCATCATGCTGACCCGAATACCCAAACGGTCGATGGGATT
ACTCCACTCGATATTCTACGAACCCTAACTTCTGATTTTTTATTCAAAGGTGCGATCCCT
GGTCTAACTCATATCGAACCAAATAAACTGCGTCTATGTCTTGAGTTAGTTCAATCCGCG
GCTATGGTAATTTCACGAGAGGAGGGTGAAGCGAATAACAATCAATCTTCGGAGAACATG
TATACACATATTCGTGAAGATCATAGTTCGAGTACGAGCAGTGGAAACAACAACTTGAAT
TTGGATTCAAGAATGGTGTATTTGAATCTTGGTGCAAATGTAGCAAATCATCATCATCAA
ATGGCATGCAAAATGAATAATAATAATGATCATGATTGCAGCAGTAGCCACAATAATCAG
AATCCATCAACAATGTATCATCATCATCATCATTCTCAGTATTAG

Peptide Sequence

PEP ID

Solyc10g079460.1.1
PEP Infomation

BTB/POZ ankyrin repeat protein (AHRD V3.3 *** G8GTN4_MEDTR)
Sequence

MNTLEDSLKTLSLDYLNLLINGQAFSDVTFSVEGRLIHAHRCILAARSLFFRKFFCGPES
ASVSGPRLGPFGVGAGLASSPRGTTSCSQVVIPVNTVGYEVFLLMLQFLYSGQVSIVPQK
HEPRPNCGERNCWHTHCTSAVDLALDTLSAARSFGVEQLALLTQKHLISMVEKASIEDVM
KVLIASRKQDMHQLWTTCSHLVAKSGLPPEILAKHLPIDVVAKIEDLRLKSSISRRSLIP
HHHHNHQHQHQMSSNIELEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDESLALHYAVE
NCSREVVKALLELGAADVNYQAGPSCKSPLHLAAEMVSPDMVAVLLDHHADPNTQTVDGI
TPLDILRTLTSDFLFKGAIPGLTHIEPNKLRLCLELVQSAAMVISREEGEANNNQSSENM
YTHIREDHSSSTSSGNNNLNLDSRMVYLNLGANVANHHHQMACKMNNNNDHDCSSSHNNQ
NPSTMYHHHHHSQY*

Transcript Sequence

Transcript ID

Solyc10g079460.1.1
Transcript Infomation

BTB/POZ ankyrin repeat protein (AHRD V3.3 *** G8GTN4_MEDTR)
Sequence

ATGAATACTCTTGAAGATTCCTTAAAAACTCTCTCTTTAGATTATCTAAATCTTCTCATC
AATGGTCAAGCTTTTAGTGATGTTACTTTTAGTGTTGAAGGTCGTTTAATACATGCTCAT
AGATGCATCTTAGCTGCTAGAAGTCTCTTCTTCCGCAAATTCTTCTGCGGGCCGGAGTCA
GCATCTGTCTCCGGCCCGCGGTTGGGCCCGTTCGGCGTTGGCGCTGGATTAGCGTCGTCG
CCGAGGGGCACAACAAGTTGTTCACAAGTAGTAATACCTGTGAACACTGTAGGGTATGAG
GTTTTTTTGTTGATGTTACAATTTTTGTATAGTGGACAAGTTTCAATTGTGCCACAAAAA
CATGAACCAAGGCCTAATTGTGGTGAAAGAAACTGTTGGCATACACATTGCACATCAGCC
GTTGATCTTGCACTGGATACACTCTCAGCCGCTAGATCTTTTGGAGTTGAACAACTTGCT
TTGCTTACTCAGAAGCATTTGATAAGCATGGTGGAAAAAGCTTCAATTGAGGATGTGATG
AAAGTTTTAATAGCTTCAAGAAAACAAGACATGCATCAACTTTGGACTACTTGTTCTCAT
TTGGTTGCTAAATCAGGTCTCCCACCTGAAATCCTAGCCAAACACCTCCCTATTGATGTT
GTTGCCAAAATCGAAGACCTTCGTCTCAAATCCTCTATATCGAGAAGATCTTTAATCCCT
CATCATCATCACAACCATCAACATCAACATCAAATGTCCTCGAACATTGAGCTCGAGGAC
CAGAAGATCCGACGAATGAGACGAGCGCTCGATTCGTCGGACGTGGAATTAGTCAAACTT
ATGGTAATGGGAGAAGGTTTGAATCTTGATGAGTCACTCGCGTTACATTACGCGGTTGAA
AATTGTAGCCGCGAAGTTGTAAAGGCTTTACTTGAGCTCGGTGCGGCCGATGTAAATTAC
CAGGCCGGGCCGAGCTGTAAAAGCCCGTTACACTTAGCGGCCGAAATGGTCTCACCGGAT
ATGGTTGCGGTTCTACTAGATCATCATGCTGACCCGAATACCCAAACGGTCGATGGGATT
ACTCCACTCGATATTCTACGAACCCTAACTTCTGATTTTTTATTCAAAGGTGCGATCCCT
GGTCTAACTCATATCGAACCAAATAAACTGCGTCTATGTCTTGAGTTAGTTCAATCCGCG
GCTATGGTAATTTCACGAGAGGAGGGTGAAGCGAATAACAATCAATCTTCGGAGAACATG
TATACACATATTCGTGAAGATCATAGTTCGAGTACGAGCAGTGGAAACAACAACTTGAAT
TTGGATTCAAGAATGGTGTATTTGAATCTTGGTGCAAATGTAGCAAATCATCATCATCAA
ATGGCATGCAAAATGAATAATAATAATGATCATGATTGCAGCAGTAGCCACAATAATCAG
AATCCATCAACAATGTATCATCATCATCATCATTCTCAGTATTAG