Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g079250.2.1
CDS Infomation

DNA repair protein recA (AHRD V3.3 *** A0A061GHC6_THECC)
Sequence

ATGGTGCTTCAATTTCTTCGTTTCATTTCCTCTTCCTCTCGTTGCCTTTCTGTTTTCCCC
TTATCTTCCTTCAAACCGGAGAATGGAATGGTTTGGAGAAGGATGCTTAGTGCTTATGCA
TCTTCAGCAGAAGGTGAACTTGACGAAATCCAAGATGACACCAAAACATCAGAGAAAGCC
AGTGCACTGCATTCGGCCCTCTCGCAGCTTGAAGGCGATTTTTGCAAAGAATCAAGGTTG
TCCTTGCAGCGCTTCTTTGGTGCTAGACGTACTCCTGTAATACCTACGGGCTCATTGAGG
CTTGATCTAGCACTTGGGCTTGGAGGATTACCTAAGGGAAGAATTGTTGAAATTTACGGA
CAAGAAGCATCTGGGAAGACAACACTTGCCCTTCATGTAATTAGAGAGGCTCAAAAGCTT
GGAGGTTATTGTGCATATCTGGATGTCGAAAATGGAATGAACCCCTCTCTTGCCGAAGCA
ATAGGGGTAAATGTAGAAAATCTCCTTATTTCGCAGCCAGATTCTGCTGAGAATTTGCTG
AGTATTGTTAATACCCTGACAAAAAGTGGATCCATGGATGTAATCGTGGTTGATAGTGTG
GCAGCTCTTGTTCCCCAACTTGAGATTGATGCTACGTTATGTGACTCTCCTAAAGGCTTG
CAATCAAAGATTATGACACAAGCACTACGTAAAATTCATTATTCGTTAGGCAACTCTAGC
ACACTAATTATTTTCATTAATCAGGTAAGAAGATCTAACAAAGGATTAGTTCGAGGCTCC
GGGTGTATGGATGAAGTAACTTGTGGTGGAAATGCTTTGCCTTTTTATGCTGCCATACGG
CTTAGAACGATCAGAAAACAATTGCTTAAGACCAGGCATAAGATTACTGGTCTTAGGATC
TGCGTAAAGGTGGTTAAAAATAAGCTAGCTCCTGCAGCAACAGAAGCTGAACTGAGCATA
CAGTACGGCGGAGGCTTTTGCATTGAACCTGAGGTTTTGGAATTGGCTTGTGAACATGAA
GTCGTTCTGAAAGAAGGAGGGAGCTACTTCATTGATGGACAGGTTTTAAATAGTAGACAG
GACGCTGAAGATTATCTAGCTTCAAATGGTGACATTTTAGCTAAGATAGTTGAAACTTTA
AGAGATCAGCTATTCATGAACAATAACGGAGAAAAGAAAACTGATTAG

Peptide Sequence

PEP ID

Solyc10g079250.2.1
PEP Infomation

DNA repair protein recA (AHRD V3.3 *** A0A061GHC6_THECC)
Sequence

MVLQFLRFISSSSRCLSVFPLSSFKPENGMVWRRMLSAYASSAEGELDEIQDDTKTSEKA
SALHSALSQLEGDFCKESRLSLQRFFGARRTPVIPTGSLRLDLALGLGGLPKGRIVEIYG
QEASGKTTLALHVIREAQKLGGYCAYLDVENGMNPSLAEAIGVNVENLLISQPDSAENLL
SIVNTLTKSGSMDVIVVDSVAALVPQLEIDATLCDSPKGLQSKIMTQALRKIHYSLGNSS
TLIIFINQVRRSNKGLVRGSGCMDEVTCGGNALPFYAAIRLRTIRKQLLKTRHKITGLRI
CVKVVKNKLAPAATEAELSIQYGGGFCIEPEVLELACEHEVVLKEGGSYFIDGQVLNSRQ
DAEDYLASNGDILAKIVETLRDQLFMNNNGEKKTD*

Transcript Sequence

Transcript ID

Solyc10g079250.2.1
Transcript Infomation

DNA repair protein recA (AHRD V3.3 *** A0A061GHC6_THECC)
Sequence

TTATTTTGCCCCTTATCTTTCTTGAAAAAGATTAAAAGAAAAATGAAAAGCTCTGTTTGT
AGATTAATGGCAAGACTATAATACAGCTGCTAAAAGCTCCAAAGTTGGAGTGGCACAGAT
GCCCTAGTGAAAAAACAATGGTGCTTCAATTTCTTCGTTTCATTTCCTCTTCCTCTCGTT
GCCTTTCTGTTTTCCCCTTATCTTCCTTCAAACCGGAGAATGGAATGGTTTGGAGAAGGA
TGCTTAGTGCTTATGCATCTTCAGCAGAAGGTGAACTTGACGAAATCCAAGATGACACCA
AAACATCAGAGAAAGCCAGTGCACTGCATTCGGCCCTCTCGCAGCTTGAAGGCGATTTTT
GCAAAGAATCAAGGTTGTCCTTGCAGCGCTTCTTTGGTGCTAGACGTACTCCTGTAATAC
CTACGGGCTCATTGAGGCTTGATCTAGCACTTGGGCTTGGAGGATTACCTAAGGGAAGAA
TTGTTGAAATTTACGGACAAGAAGCATCTGGGAAGACAACACTTGCCCTTCATGTAATTA
GAGAGGCTCAAAAGCTTGGAGGTTATTGTGCATATCTGGATGTCGAAAATGGAATGAACC
CCTCTCTTGCCGAAGCAATAGGGGTAAATGTAGAAAATCTCCTTATTTCGCAGCCAGATT
CTGCTGAGAATTTGCTGAGTATTGTTAATACCCTGACAAAAAGTGGATCCATGGATGTAA
TCGTGGTTGATAGTGTGGCAGCTCTTGTTCCCCAACTTGAGATTGATGCTACGTTATGTG
ACTCTCCTAAAGGCTTGCAATCAAAGATTATGACACAAGCACTACGTAAAATTCATTATT
CGTTAGGCAACTCTAGCACACTAATTATTTTCATTAATCAGGTAAGAAGATCTAACAAAG
GATTAGTTCGAGGCTCCGGGTGTATGGATGAAGTAACTTGTGGTGGAAATGCTTTGCCTT
TTTATGCTGCCATACGGCTTAGAACGATCAGAAAACAATTGCTTAAGACCAGGCATAAGA
TTACTGGTCTTAGGATCTGCGTAAAGGTGGTTAAAAATAAGCTAGCTCCTGCAGCAACAG
AAGCTGAACTGAGCATACAGTACGGCGGAGGCTTTTGCATTGAACCTGAGGTTTTGGAAT
TGGCTTGTGAACATGAAGTCGTTCTGAAAGAAGGAGGGAGCTACTTCATTGATGGACAGG
TTTTAAATAGTAGACAGGACGCTGAAGATTATCTAGCTTCAAATGGTGACATTTTAGCTA
AGATAGTTGAAACTTTAAGAGATCAGCTATTCATGAACAATAACGGAGAAAAGAAAACTG
ATTAGATAGTCATTTTCTGGTTTAAATCAACACCAAGATTTGTGTTGCCTCCTTCTGCAA
CACTATCGTGCGACGTCCCTTTGAAGTAAAGCCATCTTCATGAAAAGAAGCAAATGGGAG
TTTATTTCCTCAATCAGGCATCTGCAACCTCAAACCAAGCTACCCAAATAGCCTGCTTAT
AGACTTCCCTCTTCTACTGTTTGCGAGGCACACATATACTGGAGACACAATTTCTCTTGA
AGGTGGACAATGGACATACAAATCTTCCAACTTTGGCCTTTGCGAGTGATGATTCCAGCA
AATGCTTTGTCCTTCTAGAATTTTGTGAATCTTCTTTCTGCCTCATGGTCAAGTAATTTT
ATTTGGCTTCTAGATTTGAGGTCAGCAGAGTTGTTGCTGGACTGAATGTTATCATTAGTT
CAAAACATACAGGAGGGCTACTTTTACTGGTATAGATTTTATCGTCGTGGATCAGACATT
TCCGACTATCTCATTCACTTATCTGGTAATTTGAGCATTACAGTTGATACTTCTTGTCAA
ATGTCATTATCTTGCCTATTGCGTTATGTTCCAAAAGTTTACAAATTTGTAGTATGTGAA
ATCTGTCAATCTCAGTTGAGGAGAACAGTGTGCCTCACATGTGTTATTCTGTTACATTGG
ATATACCATAGACATTTTAAGCCTGTAGAAATGAGGAGCTTCCAATGGATTTTGTTTCTC
AAGTGTTCAATGTGTTAACATAAGTAGTGAAAGTTGGAGTAAACTTGCTATATTTCTTCT
ACATATGGTTGGTCCAATCCATTTTCCTTAGTTTCAACATCAATGGTTTTGTAAGAAAGG
TAAGACATAAATTTTGGTGTAAGTTCATTTTTTTTTGAAGGATTTTACATGAAATAATAA
AGAGGTGGTTTGAACTTTGAAGGAAGAAATCAAAAGAAATAAACCTATGTAAATACAGAA
GGCAAAGATTAAACCTCTATGCAATTACCAAACTTGGAAATGCTTCCAGGTGAATGGCCA
TCAAACAACAATTCTTCCTCCAGTATATCAACTCAGAAG