Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g079010.2.1
CDS Infomation	Protein shisa-5 (AHRD V3.3 *** A0A0B0NQ09_GOSAR)
Sequence	ATGCCAGGGTTAGCGCAGAGAAATGATGAGCAAAATGATAATGAAACGGCGGTGTTTAAT GCTTCTAGTAAATCGATTTCGAGTAATGGGTTTTGGTCAAAGCATCGCGAGGATATAAGC TACAATCAGCTTCAGAAGTTCTGGAGTGAGCTATCACCTCAAGCTCGGCAGAAGCTTTTA AAGATTGACAAACAAACTCTCTTTGAGCAAGCTCGTAAGAACATGTACTGTTCTAGATGC AATGGATTACTGCTTGAAGGTTTTTTCCAAATTGTCATGTATGGGAAGTCATTGCAGCAT GAGGATGCAGGTGCTCACCGTACTTGCAGCAGAGTAGGGACATTGAAGGATCAATGTGAT GGAGAGTTGCATGCAACAACAGGGTCTGAGTATGATGTTCAAGATCCATCTGTCCATCCT TGGGGAGGTCTAACCACAACACGAGATGGGATGCTTACCTTGTTGGATTGTTATCTATAT ACCAAATCCCTGAAGGGACTTCAAAATGTGTTTGACAGTTCACGTGGAAGGGAACGAGAA AGAGAGCTGCTTTATCCTGATGCTTGTGGTGGAGGTGCTAGGGGTTGGATAAGCCAAGGG ATGGCAACTTATGGCAGAGGGCATGGAACAAGAGAAACATGTGCTCTTCATACTACCAGA CTTTCTGTAGACACATTGGTAGACTTCTGGACTGCCCTGGGGGAAGAGACACGACAGTCT CTTCTGAAAATGAAGGAAGAGGACTTTATTGAAAGGCTCATGTACCGGTTTGATAGCAAG AGATTTTGTAGAGATTGTAGAAGGAATGTTATCCGGGAATTCAAGGAGCTGAAGGAGTTG AAACGCATGCGCAGAGAACCTCATTGCAGTATTTGGTTTTGTGTTGCTGATGCAGCATTC CAGTATGAGGTTTCCCACGACACAATTGTAGCTGACTGGCATCAGGCGTTCATTGATACC TTTGGGACATATCATCACTTTGAATGGGCAGTTGGAACTGGAGAAGGAAAATGTGATATA TTGGACTATGAAAATGTTGGCTTGAGTGGAAGAGTGCAAGTCAGTGGTCTAGACTTGAGC GGTTTCAATGCCTGCTATATCACTCTACGGGCATGGAAACTGGATGGTAGATGTACTGAA CTTTCTGTCAAAGCACATGCATTGAAGGGTCAACAGTGTGTACATTGCCGGCTTGTGGTT GGGGATGGTTTTGTTACAATAACAAGAGGGGAAAGCATTAGGAGGTTCTTTGAGCATGCT GAAGAGGCTGAAGAAGAAGAGGATGAGGATTCCATGGACAAGGATGGAAATGAACTAGAT GGTGAATGCTCTCGTCCTCAAAAACATGCCAAGAGTCCTGAACTTGCTCGGGAATTTCTT CTAGATGCCGCAACTGTTGAAAAAGCTTTTAGAGAAGGAACTGCACGGCAAAATGCACAT AGCATATTTGTATGTCTTGCATTGAAGTTGCTGGAGGAGCGCATTCATGTTGCCTGCAAG GAGATAGTTACTTTAGAAAAGCAGGAAGAATTATCACCTAACGTTGATGAGGAATCTAAT CTTATGGGCTATACAGACTCGGTAAGTGAAGCTGGTGAAGTTAATTTATCCAGCCCTTTA TCGCCGAATGATGAAGATGATCTACTTTTGGATGGATATAATCACCCAAGTGTGCAAATC AACTCTGATGATTATTTTGAGGAATTCAGTATGAACGAGGGGAATGGCTCATTTCCAGCT GACCATATGAGACATTCTGGGAGGTTGAAATTTCGAAAAGAATTTGAACCAGATTCAAGC CTGAAATGGTTTGATGGACGTCGGTGTGCTGTTTCAGGCAGTGGAGGTGCGGCAAGTAAG TATGAGCCAAGACATCACTGTGATAACTTTGAAGCTTCAAGGAGTACCAACAGGTTAAAT AAGCCATTAAGAAGTAATGCTGCAAAGTCCAGCATGAAAGATGGTGCCTCTAAGTTTGTT GAGAAGTTGAATTGTTCCAATATCAGGAAGTATGACCGATATGAATCTTCAGATTGCAGC TGTAACCAACACAGTGACGACAGAGCTAAGTTGTACCCAAACATGGCCAGAGGAATCGGG AACAATAAACCTGTGAGTAAGTTAGGATGCGAATCAGATATCTCCAAGCCCTACTATGGA ACCAAATATAATCAGGTTGTATATCTGCGTGAAAATTGTGCAAGACCCAAAAGCAAAACG GCTATACGTAATAATCTGTCTAGCAGAGATTCATCTGTTATTAAGAAGGTATGGGAACCA ATGGAATTGCGAAAGAAATATCCAAGGAGCAGTTCTGACTCTGATGTTACCTTGAGATCT TCAACTTTCCAGGTTGAGAGCACCGGAATTGATAAGCATCCTGAGCCTTCTATTTCTAAT AATTTGGGAGTTTCCAGTTCTCTTCAATTAAATGAAGAAAAGGGCATACAAGAATTAAGA AAGTCTAGTTCTGAAACTAAAAGCAACTGTGCAAGTGGTTTTCACTTGGAAGATAAATCA CTTTGTTATGTGAAAGAAGTGGCTGAAGATGAAGTTGATTCTTGTCTGATCCCGAGGTCT TCCTCTCAGAGGACTTTGGGTTTATCACAAAGCAGCTCCTCTAATTCTGATAATTGCTCA TCCTGCCTTAGTGAGGGAGACAGTGCTACATCCTTTTCAAATCCACATAATTCAGAATCA TCATCGACGTCAGATTCAGAAGATTGCAGCAAAAACTCTGAAGGAAGAGAAACTTCTGAA GTTATGCAGAATGCTTTTGCTGAATGCTACGAAGTTGCACAAGAAAAAAGAACTGCTGCT GCTAAAGGTGAGGATGTCAGTTCCCTGACACCAAATTCTGTAGGAACTACTGTGGGAAGT TTCCCGACCACAGCTGCTTCAACAAATGCAAATGTGAATGGGACTCTTGGCATGCGACCT CAATCCTTGCGTCCACCAGTCCACAGTCAAGGCACACACTTCCCAAGGTTTCAAGTTCCT GCTATGGACTATTATTATCAAACTCCACCTTCTTGGGCGACTACTCCTGTAAATGGGTTC ATTCCATTTCCTCATCCAAACCATTATGTATTTGCTACTCCATTTTCATATGGTTTAAAT GCGAATGCCCATTTCATGCAGCATGGTGCCCTGCAGCATCTGATCCCTCCACCCATTAAC CATGGCCACTTGCCTGTTTTTCAGTCAGTTGCTCCAACCAGTGACAGATGCATCAAGGAA AATGCCAGGGTTTCAACAGTTGGTAGGTTAAAAGAGGAAGCTAATGTCCAAAGGATGGCT CCAGTAGGACAGCACACAATGGAGAAGTCAACGACTGCTGGATCCGGTGAAACTGAGGAG TCTAGAAATTCAGGCTTCTCTCTTTTCTCTTTCACACCCGATCCTTTTTCTTTAAAAGAA GGGATGGCGAGGAACTTATCTTCAAATTTGAGAACGAATCACATTGCGGGTGAAAGTGGC TGCAATAAGAAAGAACCCATTGAAGAGTACAATCCATTTGCAAATCGAATTGAGTTTCCC TTTGCCGATATA

Peptide Sequence

PEP ID	Solyc10g079010.2.1
PEP Infomation	Protein shisa-5 (AHRD V3.3 *** A0A0B0NQ09_GOSAR)
Sequence	MPGLAQRNDEQNDNETAVFNASSKSISSNGFWSKHREDISYNQLQKFWSELSPQARQKLL KIDKQTLFEQARKNMYCSRCNGLLLEGFFQIVMYGKSLQHEDAGAHRTCSRVGTLKDQCD GELHATTGSEYDVQDPSVHPWGGLTTTRDGMLTLLDCYLYTKSLKGLQNVFDSSRGRERE RELLYPDACGGGARGWISQGMATYGRGHGTRETCALHTTRLSVDTLVDFWTALGEETRQS LLKMKEEDFIERLMYRFDSKRFCRDCRRNVIREFKELKELKRMRREPHCSIWFCVADAAF QYEVSHDTIVADWHQAFIDTFGTYHHFEWAVGTGEGKCDILDYENVGLSGRVQVSGLDLS GFNACYITLRAWKLDGRCTELSVKAHALKGQQCVHCRLVVGDGFVTITRGESIRRFFEHA EEAEEEEDEDSMDKDGNELDGECSRPQKHAKSPELAREFLLDAATVEKAFREGTARQNAH SIFVCLALKLLEERIHVACKEIVTLEKQEELSPNVDEESNLMGYTDSVSEAGEVNLSSPL SPNDEDDLLLDGYNHPSVQINSDDYFEEFSMNEGNGSFPADHMRHSGRLKFRKEFEPDSS LKWFDGRRCAVSGSGGAASKYEPRHHCDNFEASRSTNRLNKPLRSNAAKSSMKDGASKFV EKLNCSNIRKYDRYESSDCSCNQHSDDRAKLYPNMARGIGNNKPVSKLGCESDISKPYYG TKYNQVVYLRENCARPKSKTAIRNNLSSRDSSVIKKVWEPMELRKKYPRSSSDSDVTLRS STFQVESTGIDKHPEPSISNNLGVSSSLQLNEEKGIQELRKSSSETKSNCASGFHLEDKS LCYVKEVAEDEVDSCLIPRSSSQRTLGLSQSSSSNSDNCSSCLSEGDSATSFSNPHNSES SSTSDSEDCSKNSEGRETSEVMQNAFAECYEVAQEKRTAAAKGEDVSSLTPNSVGTTVGS FPTTAASTNANVNGTLGMRPQSLRPPVHSQGTHFPRFQVPAMDYYYQTPPSWATTPVNGF IPFPHPNHYVFATPFSYGLNANAHFMQHGALQHLIPPPINHGHLPVFQSVAPTSDRCIKE NARVSTVGRLKEEANVQRMAPVGQHTMEKSTTAGSGETEESRNSGFSLFSFTPDPFSLKE GMARNLSSNLRTNHIAGESGCNKKEPIEEYNPFANRIEFPFADI

Transcript Sequence

Transcript ID	Solyc10g079010.2.1
Transcript Infomation	Protein shisa-5 (AHRD V3.3 *** A0A0B0NQ09_GOSAR)
Sequence	TTGGACATTTTCAATAAATCCATGGAAATTTGCAATGTTAACCCTTGCAAAAAAGCCAAT GTGTTGGTTTCTCCCTAAAATCTTCTCTCTCAGTGAAAAATTTGTACGTACATAAATACA GATACACATTGCACCAAATCTCATCAGCGAAAACCTCTATCCTCCGTTTCGCCCCCCCCC CCCCCTTTTCCCCCTTTTTTCTATCTAAATTCTCGATTTTCTTCGATCCTTCGTCTTCGA TTGTCACTGTTAGATTCTCAGTAGACCTTTAATCTCATGTTTATACGGTTTTAATCGGAT TCATATGATTAAATTTTGTATTTATTGGTAAGAACGTATCGAAATTTCGATCTATGATTA TTGGGGGAAGAATCGATTGATTGTTAGGTTGAAATTCGGTGAATTTATTTTATCGGATTT CGGTGATAATTTTTCTGAATCGAATCGGACGGCGGAGATTTGAGGAGAGGGATGGGTAGA TAGATAGGTGAAAGTTGAATCGGTTTAAGAGATTGGTAAGCGAAAATGCCAGGGTTAGCG CAGAGAAATGATGAGCAAAATGATAATGAAACGGCGGTGTTTAATGCTTCTAGTAAATCG ATTTCGAGTAATGGGTTTTGGTCAAAGCATCGCGAGGATATAAGCTACAATCAGCTTCAG AAGTTCTGGAGTGAGCTATCACCTCAAGCTCGGCAGAAGCTTTTAAAGATTGACAAACAA ACTCTCTTTGAGCAAGCTCGTAAGAACATGTACTGTTCTAGATGCAATGGATTACTGCTT GAAGGTTTTTTCCAAATTGTCATGTATGGGAAGTCATTGCAGCATGAGGATGCAGGTGCT CACCGTACTTGCAGCAGAGTAGGGACATTGAAGGATCAATGTGATGGAGAGTTGCATGCA ACAACAGGGTCTGAGTATGATGTTCAAGATCCATCTGTCCATCCTTGGGGAGGTCTAACC ACAACACGAGATGGGATGCTTACCTTGTTGGATTGTTATCTATATACCAAATCCCTGAAG GGACTTCAAAATGTGTTTGACAGTTCACGTGGAAGGGAACGAGAAAGAGAGCTGCTTTAT CCTGATGCTTGTGGTGGAGGTGCTAGGGGTTGGATAAGCCAAGGGATGGCAACTTATGGC AGAGGGCATGGAACAAGAGAAACATGTGCTCTTCATACTACCAGACTTTCTGTAGACACA TTGGTAGACTTCTGGACTGCCCTGGGGGAAGAGACACGACAGTCTCTTCTGAAAATGAAG GAAGAGGACTTTATTGAAAGGCTCATGTACCGGTTTGATAGCAAGAGATTTTGTAGAGAT TGTAGAAGGAATGTTATCCGGGAATTCAAGGAGCTGAAGGAGTTGAAACGCATGCGCAGA GAACCTCATTGCAGTATTTGGTTTTGTGTTGCTGATGCAGCATTCCAGTATGAGGTTTCC CACGACACAATTGTAGCTGACTGGCATCAGGCGTTCATTGATACCTTTGGGACATATCAT CACTTTGAATGGGCAGTTGGAACTGGAGAAGGAAAATGTGATATATTGGACTATGAAAAT GTTGGCTTGAGTGGAAGAGTGCAAGTCAGTGGTCTAGACTTGAGCGGTTTCAATGCCTGC TATATCACTCTACGGGCATGGAAACTGGATGGTAGATGTACTGAACTTTCTGTCAAAGCA CATGCATTGAAGGGTCAACAGTGTGTACATTGCCGGCTTGTGGTTGGGGATGGTTTTGTT ACAATAACAAGAGGGGAAAGCATTAGGAGGTTCTTTGAGCATGCTGAAGAGGCTGAAGAA GAAGAGGATGAGGATTCCATGGACAAGGATGGAAATGAACTAGATGGTGAATGCTCTCGT CCTCAAAAACATGCCAAGAGTCCTGAACTTGCTCGGGAATTTCTTCTAGATGCCGCAACT GTTGAAAAAGCTTTTAGAGAAGGAACTGCACGGCAAAATGCACATAGCATATTTGTATGT CTTGCATTGAAGTTGCTGGAGGAGCGCATTCATGTTGCCTGCAAGGAGATAGTTACTTTA GAAAAGCAGGAAGAATTATCACCTAACGTTGATGAGGAATCTAATCTTATGGGCTATACA GACTCGGTAAGTGAAGCTGGTGAAGTTAATTTATCCAGCCCTTTATCGCCGAATGATGAA GATGATCTACTTTTGGATGGATATAATCACCCAAGTGTGCAAATCAACTCTGATGATTAT TTTGAGGAATTCAGTATGAACGAGGGGAATGGCTCATTTCCAGCTGACCATATGAGACAT TCTGGGAGGTTGAAATTTCGAAAAGAATTTGAACCAGATTCAAGCCTGAAATGGTTTGAT GGACGTCGGTGTGCTGTTTCAGGCAGTGGAGGTGCGGCAAGTAAGTATGAGCCAAGACAT CACTGTGATAACTTTGAAGCTTCAAGGAGTACCAACAGGTTAAATAAGCCATTAAGAAGT AATGCTGCAAAGTCCAGCATGAAAGATGGTGCCTCTAAGTTTGTTGAGAAGTTGAATTGT TCCAATATCAGGAAGTATGACCGATATGAATCTTCAGATTGCAGCTGTAACCAACACAGT GACGACAGAGCTAAGTTGTACCCAAACATGGCCAGAGGAATCGGGAACAATAAACCTGTG AGTAAGTTAGGATGCGAATCAGATATCTCCAAGCCCTACTATGGAACCAAATATAATCAG GTTGTATATCTGCGTGAAAATTGTGCAAGACCCAAAAGCAAAACGGCTATACGTAATAAT CTGTCTAGCAGAGATTCATCTGTTATTAAGAAGGTATGGGAACCAATGGAATTGCGAAAG AAATATCCAAGGAGCAGTTCTGACTCTGATGTTACCTTGAGATCTTCAACTTTCCAGGTT GAGAGCACCGGAATTGATAAGCATCCTGAGCCTTCTATTTCTAATAATTTGGGAGTTTCC AGTTCTCTTCAATTAAATGAAGAAAAGGGCATACAAGAATTAAGAAAGTCTAGTTCTGAA ACTAAAAGCAACTGTGCAAGTGGTTTTCACTTGGAAGATAAATCACTTTGTTATGTGAAA GAAGTGGCTGAAGATGAAGTTGATTCTTGTCTGATCCCGAGGTCTTCCTCTCAGAGGACT TTGGGTTTATCACAAAGCAGCTCCTCTAATTCTGATAATTGCTCATCCTGCCTTAGTGAG GGAGACAGTGCTACATCCTTTTCAAATCCACATAATTCAGAATCATCATCGACGTCAGAT TCAGAAGATTGCAGCAAAAACTCTGAAGGAAGAGAAACTTCTGAAGTTATGCAGAATGCT TTTGCTGAATGCTACGAAGTTGCACAAGAAAAAAGAACTGCTGCTGCTAAAGGTGAGGAT GTCAGTTCCCTGACACCAAATTCTGTAGGAACTACTGTGGGAAGTTTCCCGACCACAGCT GCTTCAACAAATGCAAATGTGAATGGGACTCTTGGCATGCGACCTCAATCCTTGCGTCCA CCAGTCCACAGTCAAGGCACACACTTCCCAAGGTTTCAAGTTCCTGCTATGGACTATTAT TATCAAACTCCACCTTCTTGGGCGACTACTCCTGTAAATGGGTTCATTCCATTTCCTCAT CCAAACCATTATGTATTTGCTACTCCATTTTCATATGGTTTAAATGCGAATGCCCATTTC ATGCAGCATGGTGCCCTGCAGCATCTGATCCCTCCACCCATTAACCATGGCCACTTGCCT GTTTTTCAGTCAGTTGCTCCAACCAGTGACAGATGCATCAAGGAAAATGCCAGGGTTTCA ACAGTTGGTAGGTTAAAAGAGGAAGCTAATGTCCAAAGGATGGCTCCAGTAGGACAGCAC ACAATGGAGAAGTCAACGACTGCTGGATCCGGTGAAACTGAGGAGTCTAGAAATTCAGGC TTCTCTCTTTTCTCTTTCACACCCGATCCTTTTTCTTTAAAAGAAGGGATGGCGAGGAAC TTATCTTCAAATTTGAGAACGAATCACATTGCGGGTGAAAGTGGCTGCAATAAGAAAGAA CCCATTGAAGAGTACAATCCATTTGCAAATCGAATTGAGTTTCCCTTTGCCGATATA