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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g078540.2.1
CDS Infomation

H/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed (AHRD V3.3 *-* Q2R242_ORYSJ)
Sequence

GCAGAGGTGTCTTCTTTTATGCACGCATGTGAAGGAGATGCAGTGACAAAGCTGACAAAT
GAAAAAATCCCTTATTTTAATGCACCAATTTATCTTCAGAACAAGACACAGATTGGGAAA
GTTGATGAGATTTTTGGTCCTATTAATGAATCCCTTTTTTCGATTAAGATGATGGAGGGA
ATCATTGCAACTTCATATTCAGCTGGTGATAAGTTTTACATTGACCCAGCTAAGCTTTTG
CCACTGGCGAGATTTCTTCCACAGCCCAAGGGAGCACAACAAGCTTTTAGAGGCGGTGGA
CGAGGTGGAGGAAGAGGTGGTAGAGGTGGACGTGGAGGCGGTGGTGGTTTTCGTGGAGCT
AGAGGTGGAGGTGGTGGTTTTCGTGGGGGTAGAGGACCTCCCCGAGGTGGCCGTGGAGGC
GGTTTTAGGGGTAGAGGGAGATTTTAA

Peptide Sequence

PEP ID

Solyc10g078540.2.1
PEP Infomation

H/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed (AHRD V3.3 *-* Q2R242_ORYSJ)
Sequence

AEVSSFMHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESLFSIKMMEG
IIATSYSAGDKFYIDPAKLLPLARFLPQPKGAQQAFRGGGRGGGRGGRGGRGGGGGFRGA
RGGGGGFRGGRGPPRGGRGGGFRGRGRF*

Transcript Sequence

Transcript ID

Solyc10g078540.2.1
Transcript Infomation

H/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed (AHRD V3.3 *-* Q2R242_ORYSJ)
Sequence

GCAGAGGTGTCTTCTTTTATGCACGCATGTGAAGGAGATGCAGTGACAAAGCTGACAAAT
GAAAAAATCCCTTATTTTAATGCACCAATTTATCTTCAGAACAAGACACAGATTGGGAAA
GTTGATGAGATTTTTGGTCCTATTAATGAATCCCTTTTTTCGATTAAGATGATGGAGGGA
ATCATTGCAACTTCATATTCAGCTGGTGATAAGTTTTACATTGACCCAGCTAAGCTTTTG
CCACTGGCGAGATTTCTTCCACAGCCCAAGGGAGCACAACAAGCTTTTAGAGGCGGTGGA
CGAGGTGGAGGAAGAGGTGGTAGAGGTGGACGTGGAGGCGGTGGTGGTTTTCGTGGAGCT
AGAGGTGGAGGTGGTGGTTTTCGTGGGGGTAGAGGACCTCCCCGAGGTGGCCGTGGAGGC
GGTTTTAGGGGTAGAGGGAGATTTTAAAAAGAAATATGATGTACTTTTGATTTTCTCTAT
TTTGATTTGTAATTCTGAATGCTGTGAGAACTCAATTGAGAGAATGTTATCATTAGTTCC
TTTTCGATGTTAATGAAATTAGCTCTCCTTTATCTTCATCTTGAACTAATTTAGACAGTA
GTTTTGCATCATAATTTAAACGCCAACAATTTAATTAATGGCATTATCTATTTGTTCTTG
TTGAGTCTTGGTTTGTATTTTGTGTTTGGTCTTTTATGGAATAATTTGTTTCATAATCTA
AAGAAGCAATTGTGTCACAATTAGCTAATTGTTTTTAATTAAGTTTTAAATAAGTTAATT
CAGTCCTTTTAATAAGATATGTGTGTTTTTGGGGGGGAAGAGTTGGTACGGGCATCCAAC
ACAAAATGCAGACACAATAATATTCAGAGAGTTAGAAGACAAGTAGACAATAGACTAGTT
TAACTGATAAATACGGCAAAGTGCCTCTTTCAATGTATTGTATTAGGAGTACTATTTAGA
AGACACTTTGTCCATGGGCAGAACTTACAGTTCACAAGATTTAGAAAGAAAAAAACAAAC
GGAAAACTGAGGTCCAAGCCAGTAAACATCAAATGGATAAAGTTCTGCCAAAATATGTTG
AATGCAGAAAATAAATGTGGAGAACTAAGTGAACTCCATGCTTTTCATGGTTTTATTTTT
GAGAAAGAAAAAAGCCATCACAGGCCTCATTCTTACGCCTCCCATCCTCGAAGAACGGTT
GCTCTAGCTACACGGTTAACACCTAAGGTGAAGGCGCCCATTCGGAGGTCACAGTTGTGA
GTCTTGCACATATCCTTGACATCTTTAAAACCTCTTGTCATGTATGTCTTCAACTCATCA
TTCACTTTTTTCTCATCCCACATAAAGCCTTGGATGTTCTAGCATTACAGAATCGATCAA
AAAAGTTGATTAGCTGACTGATTAATATGAGCTCTTGGAAGTTTAACATGTTCTTTCAGT
GCATAACAGAGAAGACTACAGAACAGAAAACATGCAGAGGTATTGTACCTGGACCCACTC
AAAATAACTGACGGTGACACCACCCGAGTTGGCATAAATATCCGGTAGGATGGTGACTCC
TTTCTTTGACAAAATCTGCAGAGGATTAGAGAATTAGTTAAGATGCTGCAGGTGTATTGT
GTGTCTAAAATGACTATTACAGTAGCTTATACGTCGTTTTTTAGCTTTTGCTTAGGACGC
AGACCTAGAGGCTGTTTCCAAAGGATCCTCAAAGTCAAACAAATCGAGGTAGTTATGAAA
AGGAAAAACGCCAAGCAACTAATAACGAAAGGAAAGAATTATTGCACTGACCTCATCAGC
TTCTGGATCAGTTGGATGGTTAGCAGCCTCAATAATATATTTGGCTTTAATTTCATTTGC
GTTATCCCTACAAAGAATAATTCAAAGATATCACAAATATGAAACAGAAAGGCTTTTCGA
TAACTAGTAGATTTATGCAAAATCATGAAACGTACTTGTTGATTACTCCACCGAGGGCAG
CTGGGATAAGAACATCACAGTCTTCTACCAGTATTGAATTTGCATCAATTGGATGTGCAT
CATGGAAACCTTTAACTCCACGAGTTTCCTTCACGTGTTTGAATAGGCTTTCTATGTCGA
TTCCCTTCTCATTCTTTATGGCACCAGTTATGTCACTCACTGCTACAACTTTCCCACCTT
GCTCATGGATGAGTTTTGCAGCCCAGGAACCAACATTACCAAATCCCTGAGATGAAGAAA
ACAATTATCAAAATTCGCCTGCTTGTCCACGGATCACTAACAACAAACATTCTCAACCAA
TCTATCTGACAACCTAGATGTTGTCGTTATTGAAAACAAAAATGTGTGCTTTTGTTATGG
ACTCTATCCATGCTTGGATATTGAATCATCGTAGAATAAATTTGAATATTTTGACTGTGC
TAACCTGTATAACAAAACGCTGACCAGCAACACTCTTCCCATGCTCATTAAGCAGGGCTT
CTGTAGCAAAGAGAGCCCCCCTTCCAGTAGCTGCATCTCTGCCTAGAGATCCACCGAGAT
CCTGTCATAAAGTATTATATTATACTCCTCTCCTAAGCTCAAATTAACAAATAATTCACC
GAAATAGATATGAAGTCATTTCCTCTTCAAACTTTGTGCATAATCTAATCTAGGATATTT
TCGGCATACTTACAACAGGTTTTCCAGTTACCACAGCAGGTGAATAACCATGAAATTTTG
AGTACTCGTCTAAAATCCATGCCATTGTCTGCACAAAGCAATTAACAGTCCAGTTAGATG
AATGACATTTTTTTCCATCAACTGAAATGCTAAGCCCCTGAAATTAATTTTCCACATACC
TGAGGATTTGTTCCCATATCTGGTGCAGGAACATCGGTGTGAATTCCGATTAGGTCATGT
ATTTTTTGAGTAAATACTCGAGTAAGTCGTTCCAACTCAGAGATACTCAGGTCACTAGGA
CTACATCCTATTCCTCCTTTAGCCCCACCATATGGTATATTGGCGACCGCTGTCTTCCAT
GTCATTAGCTGTGCTAATGCATTCACCTCATCAGGATCAACCTACATAAAACACCAAAAA
ATGACCATAAATCATATGCTACATCAGACAACTATAAATGTTGCTAGGAACCTCTAAAAT
GTCATTGCACCAGTGTCAAATCCTCCTAAAAAGTGTAACTTTAGGACGACTTGACAGGCG
AGGCTGCATCTTTAAGGATCTCAGCAACACAGTCTATATACTATTTGTGTTACAAACAGC
ATAATGAGTAATGATCTATCATAGACAAGAAAAACAACCTCCGGGTGGTATCTGATTCCG
CCTTTCATAGGCCCTCGTGCATTGTCGTGCTGTACCCTGAATCCAACAAAAGATGCCAAT
GTGCCATCATCCTTCGGTATAGTACACTCCACCTATAAGTTTTGCACAAATCAGTCCTTT
TTTCTTTAATAAAACTGAAAAAAGACACACACACACACCAAAAAATCTGTCCGCTAAGCA
CAATAATCTAACCACCTATAAAAACACAAGCCTGATTCTGAAAAATCCATTAGAAGTCTC
AAAAGTTCAACTCAAACTCAGTAATGCTAAACACGAAAACCAAAATC