Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g078510.2.1
CDS Infomation

Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SHH6_RICCO)
Sequence

ATGTTGAAACATGGGTTTTTAGTAGTATTAGCTTTTATGGGGTATTGGATTGATCATAAT
ATATGTGTTGAAGGCTTTGGAGTCAATTGGGGAACAATGGCAACACACATGTTGGAACCT
AAAATACTTGTGCAAATGTTGAGGGACAATGGTATTAAGAAAGTGAAGTTGTTTGATGCA
GATAAATCCACTATGGATGCACTTGCAGGTACTGATATTGAAGTTATGGTTGCGATTCCC
AATGATCAACTTCTTACTATGACTGATATTGATCGAGCTAAAGATTGGGTCAGACGTAAT
GTCACTCGTTACAATTTCAAAAATGGTGTCAACATCAAATATGTTGCAGTTGGTAATGAG
CCTTTCTTGACATCTTACAACAACTCCTTTGTGAACTTAACCTTCCCAGCTCTACAAAAC
ATCCAAAATGCACTAAACGAAGCCGGAGTTGGAGACTCCATAAAAGCAACTGTACCGCTA
AATGCTGATGTCTATTTCTCACCAGAGTCCAATCCTGTACCTTCTGCTGGTAGATTCCGA
ACCGATATTGCTGAACTAATGACACAGATTGTTCAATTCATGAGCAAGAATCAAGCACCC
TTTACAGTAAACATTTACCCTTTTCTAAGTCTTTATGCCAATGAACATTTCCCAATGGAC
TTTGCTTTCTTTGATGGTACTCCCAACCCTGTTCTCGATAACGGGGTTGAGTACACCAAT
GTATTCGACGCCAACTTTGATACCCTCTACTCTGCCTTAAAAGCAGTTGGTTATGGGCAC
ATGGCCATCCTAGTCGGAGAGGTCGGTTGGCCTACGGATGGGGACAAGAATGCTAACTTA
AACAACGCTTATCGGTTCTATAAAGGACTATTCGCAAAACTTGCATCCAACAGAGGAACA
CCCCTTAGACCAGGATACATTGAAGTGTACTTATTTGGTCTCATTGATGAGGATGCTAAA
AGCATTGCTCCTGGCAATTTCGAGCGACACTGGGGAATTTTTCGATACGATGGACAACCA
AAGTTTCCTATGGACATTTCAGGACAAGGGCAAGATAAACATCTTGTTGCTGCTAAAAAT
GTGCAATATCTACCCAACAGATGGTGTATGTTAAATCCAAATGCTAAAGATTTGAGCAAA
CTTGCTAACAATATTGACTATGCATGTACATTTTCAGATTGTACATCATTAGGATTTGGT
TCTTCTTGCAATAATTTGGATGCTATTGGGAATGCATCATATGCATTTAATATGTATTAT
CAAGTTCAAAATCAATTGGATTTGAGTTGTGATTTTGAAGGACTTGCAATGGTGACTAAC
AAGAATTTATCTCAAGGGACTTGTAATTTTATTATTCAGACAGGAATAATAAATCAGACT
AGGCAGCAGACCAATTACTGCCTAGGGTTAGCGTCTCAGAGCCAGGGATCAAGGAAATAC
AATTATGATGATGATGAGGCTTTTGAGAAGTTGAGGAAGGAGATTGAAGGAAACCAGGAC
AATGCCTTAAGCCTTTGCACTGAAAAGATAGATAGCCACATCAAGCGCTTAGATGAAGAT
CTTGCCAACTTCGCTGAAGATCTTAAGCAAGAGGGAAAGCTTCCTGCAGATGAACCTCCT
ATCCTTCCTCCATTACCTTTGGTCCTTAAGACTGAGAAGCGCAAAGCACCGTATGTAACA
CCTCAATCAAAGAAGTTTGAGTACAGAGACTGGGATTGGGACCGAGAACGTGACAGAGAC
TATGATCTTATGCCTCCTCCTGGCAGTCATAAGAAGGATTTTGCTTCTCCTGTTGATGTT
GATCAACCCATTGATCCAAATGAACCCACCTACTGTGTGTGCCATCAGGTATCCTTTGGA
GATATGATTGCCTGCGACAATGAAAATGTAGGTTCCCTTTGTGCAATGGTTATTGTTTGT
GACCTTTTGATGGAAACACTTCACTTTTCTTCCCTAAAGAAGATTTATGTAATGACAACT
AAGAGATTTGTTTTCATGGCAAGTGAGAAAAATCTCACACCTCAGGATTTATTCATATTT
TGGCTTTTACAAATTCCGTCATGA

Peptide Sequence

PEP ID

Solyc10g078510.2.1
PEP Infomation

Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SHH6_RICCO)
Sequence

MLKHGFLVVLAFMGYWIDHNICVEGFGVNWGTMATHMLEPKILVQMLRDNGIKKVKLFDA
DKSTMDALAGTDIEVMVAIPNDQLLTMTDIDRAKDWVRRNVTRYNFKNGVNIKYVAVGNE
PFLTSYNNSFVNLTFPALQNIQNALNEAGVGDSIKATVPLNADVYFSPESNPVPSAGRFR
TDIAELMTQIVQFMSKNQAPFTVNIYPFLSLYANEHFPMDFAFFDGTPNPVLDNGVEYTN
VFDANFDTLYSALKAVGYGHMAILVGEVGWPTDGDKNANLNNAYRFYKGLFAKLASNRGT
PLRPGYIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFPMDISGQGQDKHLVAAKN
VQYLPNRWCMLNPNAKDLSKLANNIDYACTFSDCTSLGFGSSCNNLDAIGNASYAFNMYY
QVQNQLDLSCDFEGLAMVTNKNLSQGTCNFIIQTGIINQTRQQTNYCLGLASQSQGSRKY
NYDDDEAFEKLRKEIEGNQDNALSLCTEKIDSHIKRLDEDLANFAEDLKQEGKLPADEPP
ILPPLPLVLKTEKRKAPYVTPQSKKFEYRDWDWDRERDRDYDLMPPPGSHKKDFASPVDV
DQPIDPNEPTYCVCHQVSFGDMIACDNENVGSLCAMVIVCDLLMETLHFSSLKKIYVMTT
KRFVFMASEKNLTPQDLFIFWLLQIPS*

Transcript Sequence

Transcript ID

Solyc10g078510.2.1
Transcript Infomation

Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SHH6_RICCO)
Sequence

TCAAAATAACATTTTTTTTTGCATCAATAAGTCAATTGAATTTCCAAGATTCTGCTTACC
ATCAACCAAACTTATCATCCTTTTCAATAAAAAACTTTCTTTTATTGAAAAGATTGAAAC
TTTCCACTCTGAGAACAACTTCAGTAAAACATCCTATCATTTTTTTTCTCTCACTTTGTT
CAAAATACCATTTTTTTTTTCAACAATAAGTCACTTGTATTTCCAAGATTCTTCTTACCC
ATCACTCAAAATCCATTTTTTTTCAATATTTTAGGCAAAAGATTGAATCTTTTTCTTGTG
AGGATATTGACAAACATGTTGAAACATGGGTTTTTAGTAGTATTAGCTTTTATGGGGTAT
TGGATTGATCATAATATATGTGTTGAAGGCTTTGGAGTCAATTGGGGAACAATGGCAACA
CACATGTTGGAACCTAAAATACTTGTGCAAATGTTGAGGGACAATGGTATTAAGAAAGTG
AAGTTGTTTGATGCAGATAAATCCACTATGGATGCACTTGCAGGTACTGATATTGAAGTT
ATGGTTGCGATTCCCAATGATCAACTTCTTACTATGACTGATATTGATCGAGCTAAAGAT
TGGGTCAGACGTAATGTCACTCGTTACAATTTCAAAAATGGTGTCAACATCAAATATGTT
GCAGTTGGTAATGAGCCTTTCTTGACATCTTACAACAACTCCTTTGTGAACTTAACCTTC
CCAGCTCTACAAAACATCCAAAATGCACTAAACGAAGCCGGAGTTGGAGACTCCATAAAA
GCAACTGTACCGCTAAATGCTGATGTCTATTTCTCACCAGAGTCCAATCCTGTACCTTCT
GCTGGTAGATTCCGAACCGATATTGCTGAACTAATGACACAGATTGTTCAATTCATGAGC
AAGAATCAAGCACCCTTTACAGTAAACATTTACCCTTTTCTAAGTCTTTATGCCAATGAA
CATTTCCCAATGGACTTTGCTTTCTTTGATGGTACTCCCAACCCTGTTCTCGATAACGGG
GTTGAGTACACCAATGTATTCGACGCCAACTTTGATACCCTCTACTCTGCCTTAAAAGCA
GTTGGTTATGGGCACATGGCCATCCTAGTCGGAGAGGTCGGTTGGCCTACGGATGGGGAC
AAGAATGCTAACTTAAACAACGCTTATCGGTTCTATAAAGGACTATTCGCAAAACTTGCA
TCCAACAGAGGAACACCCCTTAGACCAGGATACATTGAAGTGTACTTATTTGGTCTCATT
GATGAGGATGCTAAAAGCATTGCTCCTGGCAATTTCGAGCGACACTGGGGAATTTTTCGA
TACGATGGACAACCAAAGTTTCCTATGGACATTTCAGGACAAGGGCAAGATAAACATCTT
GTTGCTGCTAAAAATGTGCAATATCTACCCAACAGATGGTGTATGTTAAATCCAAATGCT
AAAGATTTGAGCAAACTTGCTAACAATATTGACTATGCATGTACATTTTCAGATTGTACA
TCATTAGGATTTGGTTCTTCTTGCAATAATTTGGATGCTATTGGGAATGCATCATATGCA
TTTAATATGTATTATCAAGTTCAAAATCAATTGGATTTGAGTTGTGATTTTGAAGGACTT
GCAATGGTGACTAACAAGAATTTATCTCAAGGGACTTGTAATTTTATTATTCAGACAGGA
ATAATAAATCAGACTAGGCAGCAGACCAATTACTGCCTAGGGTTAGCGTCTCAGAGCCAG
GGATCAAGGAAATACAATTATGATGATGATGAGGCTTTTGAGAAGTTGAGGAAGGAGATT
GAAGGAAACCAGGACAATGCCTTAAGCCTTTGCACTGAAAAGATAGATAGCCACATCAAG
CGCTTAGATGAAGATCTTGCCAACTTCGCTGAAGATCTTAAGCAAGAGGGAAAGCTTCCT
GCAGATGAACCTCCTATCCTTCCTCCATTACCTTTGGTCCTTAAGACTGAGAAGCGCAAA
GCACCGTATGTAACACCTCAATCAAAGAAGTTTGAGTACAGAGACTGGGATTGGGACCGA
GAACGTGACAGAGACTATGATCTTATGCCTCCTCCTGGCAGTCATAAGAAGGATTTTGCT
TCTCCTGTTGATGTTGATCAACCCATTGATCCAAATGAACCCACCTACTGTGTGTGCCAT
CAGGTATCCTTTGGAGATATGATTGCCTGCGACAATGAAAATGTAGGTTCCCTTTGTGCA
ATGGTTATTGTTTGTGACCTTTTGATGGAAACACTTCACTTTTCTTCCCTAAAGAAGATT
TATGTAATGACAACTAAGAGATTTGTTTTCATGGCAAGTGAGAAAAATCTCACACCTCAG
GATTTATTCATATTTTGGCTTTTACAAATTCCGTCATGA