Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g078400.2.1
CDS Infomation

plant/protein (AHRD V3.3 *** AT2G41150.2)
Sequence

ATGGCGATCCAAAAAACCCACAAGGGGAAAACAAAACCAAGATCTCCAACACTCATACTT
ACAGTTTCCATTGTAGCCATAACTTTGTTATACATAGTTTCAACGTTGTTTTCCCCAAAT
GGGTTCTCTTTTTCCACTTCCATAACCTCAAAAAACTCAGTCTTTTCTAAGAATCGTAGA
CAACATAATGGGCCTCATAAGTATCTTTATTGGGGCAATAGAATTGATTGTCCTGGAAAA
CATTGTGATACTTGTGCAGGTTTGGGTCATCAAGAATCAAGTCTTAGGTGTGCTCTTGAA
GAAGCTATGTTTCTTCGGAGAACATTTGTTATGCCTTCAAAGATGTGTATCAATCCGATC
CACAACAATAAAGGAATTCTTCACAGTTCCAGCAATTCAATTTCTGAGGAAAGGTGGGCA
GATAGTTCGTGTGCTATGGATTCTTTGTATGATCTAGATCTCATCTCTGTCACTGTACCT
GTAATTTTAGACAATTCTGAAATGTGGCATCATGTCCTGGCTACAAGCATGAAGTTAGGT
TCTAGAGGGGTTGCCCACGTTGAAGGAGTTAGCAGGGCTGATCTCAAAGAAAAAAGTTCT
TACTCAAACATTTTGCTTATCAATCGAACTGCAAGCCCGCTTTCTTGGTTTGCAGAATGC
AAGGATAGGAAAAATCACAGCTCCATTCTTCTGCCATATTCGTTTCTTCCTTCAATGGCT
GCGGAAAAACTACGATATGCAGCAGAAGAAATCAAGAAGCTGCTTGGTGATTATGATGCT
ATGCATGTTCGAAGAGGTGATGTTCTGAAGACAAGAAAGGACAGGTTTGGGGTTGAACGA
AGTTTGCACCCTCATTTGGACAGGGATACACGTGCAGAGTTTATTCTATGCAGAATAGCA
AAATGGGTCCCGCCTGGGCGAACCCTTTTTATTGCTTCGAATGAGAGGACACCAGGTTAC
TTTTCTCCTCTAGCTGTGAGGTACAAGCTGGCGTATTCCTCGAATTATAGCAGCATTTTG
GATCCACTGATTGAAAACAATTACGAGCTCTTCATGGTAGAAAGGCTTATTTTGATGGGA
GCAAAAACATTTATCAAAACAATGAAAGAAGACGATAATGATCTCAGCCTCAGCGATGAT
CCTAAAAAGAATACCAAGAAATGGGAAATACCGGTGTATACAAGAGATGGTGAAGAATGT
TAG

Peptide Sequence

PEP ID

Solyc10g078400.2.1
PEP Infomation

plant/protein (AHRD V3.3 *** AT2G41150.2)
Sequence

MAIQKTHKGKTKPRSPTLILTVSIVAITLLYIVSTLFSPNGFSFSTSITSKNSVFSKNRR
QHNGPHKYLYWGNRIDCPGKHCDTCAGLGHQESSLRCALEEAMFLRRTFVMPSKMCINPI
HNNKGILHSSSNSISEERWADSSCAMDSLYDLDLISVTVPVILDNSEMWHHVLATSMKLG
SRGVAHVEGVSRADLKEKSSYSNILLINRTASPLSWFAECKDRKNHSSILLPYSFLPSMA
AEKLRYAAEEIKKLLGDYDAMHVRRGDVLKTRKDRFGVERSLHPHLDRDTRAEFILCRIA
KWVPPGRTLFIASNERTPGYFSPLAVRYKLAYSSNYSSILDPLIENNYELFMVERLILMG
AKTFIKTMKEDDNDLSLSDDPKKNTKKWEIPVYTRDGEEC*

Transcript Sequence

Transcript ID

Solyc10g078400.2.1
Transcript Infomation

plant/protein (AHRD V3.3 *** AT2G41150.2)
Sequence

AAATGTTATCTAACCATCAAAAGTTGTTCTAAGGGGCTAATTTGAATAAACCAGAAACAT
TAAATACTAAAATGAAACTTTTAAAAACTTGAAGGTACCTAAGTGAGTTTCATCCAGATA
TTCTTATTTCTTTTGCTTCTTCTCTGTTATTCAAGAATCAGAAAAGAAAATGGCGATCCA
AAAAACCCACAAGGGGAAAACAAAACCAAGATCTCCAACACTCATACTTACAGTTTCCAT
TGTAGCCATAACTTTGTTATACATAGTTTCAACGTTGTTTTCCCCAAATGGGTTCTCTTT
TTCCACTTCCATAACCTCAAAAAACTCAGTCTTTTCTAAGAATCGTAGACAACATAATGG
GCCTCATAAGTATCTTTATTGGGGCAATAGAATTGATTGTCCTGGAAAACATTGTGATAC
TTGTGCAGGTTTGGGTCATCAAGAATCAAGTCTTAGGTGTGCTCTTGAAGAAGCTATGTT
TCTTCGGAGAACATTTGTTATGCCTTCAAAGATGTGTATCAATCCGATCCACAACAATAA
AGGAATTCTTCACAGTTCCAGCAATTCAATTTCTGAGGAAAGGTGGGCAGATAGTTCGTG
TGCTATGGATTCTTTGTATGATCTAGATCTCATCTCTGTCACTGTACCTGTAATTTTAGA
CAATTCTGAAATGTGGCATCATGTCCTGGCTACAAGCATGAAGTTAGGTTCTAGAGGGGT
TGCCCACGTTGAAGGAGTTAGCAGGGCTGATCTCAAAGAAAAAAGTTCTTACTCAAACAT
TTTGCTTATCAATCGAACTGCAAGCCCGCTTTCTTGGTTTGCAGAATGCAAGGATAGGAA
AAATCACAGCTCCATTCTTCTGCCATATTCGTTTCTTCCTTCAATGGCTGCGGAAAAACT
ACGATATGCAGCAGAAGAAATCAAGAAGCTGCTTGGTGATTATGATGCTATGCATGTTCG
AAGAGGTGATGTTCTGAAGACAAGAAAGGACAGGTTTGGGGTTGAACGAAGTTTGCACCC
TCATTTGGACAGGGATACACGTGCAGAGTTTATTCTATGCAGAATAGCAAAATGGGTCCC
GCCTGGGCGAACCCTTTTTATTGCTTCGAATGAGAGGACACCAGGTTACTTTTCTCCTCT
AGCTGTGAGGTACAAGCTGGCGTATTCCTCGAATTATAGCAGCATTTTGGATCCACTGAT
TGAAAACAATTACGAGCTCTTCATGGTAGAAAGGCTTATTTTGATGGGAGCAAAAACATT
TATCAAAACAATGAAAGAAGACGATAATGATCTCAGCCTCAGCGATGATCCTAAAAAGAA
TACCAAGAAATGGGAAATACCGGTGTATACAAGAGATGGTGAAGAATGTTAGCTCTCAGA
TGCTTGATGAAGAATACCGGCTATTTTGTTCTTCTGTTGTAAAGCAAAATCTTTGTGGTT
TCCTTTGTGAATGTCAGAGTTGTTAGGTACTAGTTTAGAAAAGTGCCTGTTTCTACATGT
TGTATGTATATTATGATATGGGAGGGCTTCAATTGGACATAGAGTTTAATTGAAAACATG
AAGTGTTGATTAGGTCATTCTTTGTTAAATCCATGAAAATGGTGCTGCCTGATCAAGAAA
TGTTAAATTTTATTGATAAGTTTGATATATATATGGTGC