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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g078270.2.1
CDS Infomation

WAT1-related protein (AHRD V3.3 *** K4D269_SOLLC)
Sequence

ATGGAAAATAACAAAGTAGGAGGAGGTTGTTTAAGTAATTTCTACCAAAGGGGAAAACCA
TACATAGCAATGATTTCATTACAATTTGGTTATGCTGGAATGAATGTTATAACCAAAGTT
AGCCTAAATGGAGGAATGAGTCATTATGTTTTAGTTGTTTATAGACATGCCTTTGCTACT
CTTGCTATTGCTCCTTTTGCTCTTCTTCTTGAAAGAAAACTTAGACCAAAGATGACTTTC
ATGATGTTCTTCCAAATATTTATATTAGGTCTTCTTGGGCCAGTGATTGATCAAAATTTC
TACTATGCTGGACTAAAGTTTACATCTCCAACATTCTCATGTGCCATGAGTAACATGCTT
CCTGCAATGACATTTGTCATGGCTGTCCTTTGCAGGATGGAGAAGGTCCATATAAAAAAG
TTGAGATGCCAAGCAAAGGTGATAGGTACAATTGTGACAGTGGCTGGAGCCATGTTAATG
ACATTGTACAAAGGACATGTTATTAATTTGGTATGGTCAAATAATATTCACACAAATAAT
AATGTTTCTCAATCCAATGAAACAAGTGATAAAGATTGGCTTAAAGGTTCAATTCTTCTT
ATTGGTGCTACTTTTGCATGGGCTTCTTTTTTTATACTTCAGGCTATTACAATGAAGAAG
TACACTGCTCCTTTGTCTCTTACTACACTTGTTTGCTTTATGGGAACTTTGCAATCAATT
GCTGTCACCTTAGTGATGGAACATAAACCTTCTGCTTGGGCTGTTGGTTTTGACATGAAT
CTTCTTGCTGCTGCCTATGCTGGGATTGTATCATCAAGCCTTGCATATTATGTTCAAGGT
CTTGTTATGGAGAAAAGAGGACCTGTTTTTGTGACTGCTTTTAGTCCCTTGATGATGATT
ATTGTTGCCATCATGGGTTCTTTCATTCTTGCTGAGAAAATCTATCTTGGAGGTGTGCTT
GGAGCAGTGTTAATTGTAGCAGGGCTATACTCAGTTTTATGGGGAAAATACAAGGAGTAC
CAAGAAAAGGAAATTGAGGGACCATTGAAAGGAGTAATGACAAATGACATAGAAATGCAA
ACAAGTGAAGTAGTCATTGGTGTCCCCATGCAACAACCTACCATCTTGGCTAAGGAAGTT
CCAAAAGCTTAA

Peptide Sequence

PEP ID

Solyc10g078270.2.1
PEP Infomation

WAT1-related protein (AHRD V3.3 *** K4D269_SOLLC)
Sequence

MENNKVGGGCLSNFYQRGKPYIAMISLQFGYAGMNVITKVSLNGGMSHYVLVVYRHAFAT
LAIAPFALLLERKLRPKMTFMMFFQIFILGLLGPVIDQNFYYAGLKFTSPTFSCAMSNML
PAMTFVMAVLCRMEKVHIKKLRCQAKVIGTIVTVAGAMLMTLYKGHVINLVWSNNIHTNN
NVSQSNETSDKDWLKGSILLIGATFAWASFFILQAITMKKYTAPLSLTTLVCFMGTLQSI
AVTLVMEHKPSAWAVGFDMNLLAAAYAGIVSSSLAYYVQGLVMEKRGPVFVTAFSPLMMI
IVAIMGSFILAEKIYLGGVLGAVLIVAGLYSVLWGKYKEYQEKEIEGPLKGVMTNDIEMQ
TSEVVIGVPMQQPTILAKEVPKA*

Transcript Sequence

Transcript ID

Solyc10g078270.2.1
Transcript Infomation

WAT1-related protein (AHRD V3.3 *** K4D269_SOLLC)
Sequence

TTCATTTATATGCACTCTTGTTAATCTGTTTCAAAAGAATATTATATAGACTAAAACTTT
ATATTTGAATAATAGACATAGAGATATGATAACATGTATACATCACAAGTTTAAAAAAAG
TTTATTTTTTAAAATGTTATCAATTCTAGTATTATGTATATATACGGTGTAATTTTTTCA
ATGAGAGGCGTTCATACCCTTACTTTCTATGGTAATTACGAATACTAAAATCCTACTCGC
ACCGAGTATTTATTTTTAAAAAAATACTGTCAATGCATGACACCTAAGAGAGAGAGGGCT
AATTTACTTTATCTAAATCCACTATATGGATAACATGAGAAAGAAGTTGTCTATAAATAC
ATTGGTTCCTCACTTCATTTCCTTAGGAAAAACACAAGTAATTCCTCCAAGTGTTTTGAG
TTCTTCTTCTTAATTCTCCAAATATACATATAGAAAAAAAAGAGAAATAATGGAAAATAA
CAAAGTAGGAGGAGGTTGTTTAAGTAATTTCTACCAAAGGGGAAAACCATACATAGCAAT
GATTTCATTACAATTTGGTTATGCTGGAATGAATGTTATAACCAAAGTTAGCCTAAATGG
AGGAATGAGTCATTATGTTTTAGTTGTTTATAGACATGCCTTTGCTACTCTTGCTATTGC
TCCTTTTGCTCTTCTTCTTGAAAGAAAACTTAGACCAAAGATGACTTTCATGATGTTCTT
CCAAATATTTATATTAGGTCTTCTTGGGCCAGTGATTGATCAAAATTTCTACTATGCTGG
ACTAAAGTTTACATCTCCAACATTCTCATGTGCCATGAGTAACATGCTTCCTGCAATGAC
ATTTGTCATGGCTGTCCTTTGCAGGATGGAGAAGGTCCATATAAAAAAGTTGAGATGCCA
AGCAAAGGTGATAGGTACAATTGTGACAGTGGCTGGAGCCATGTTAATGACATTGTACAA
AGGACATGTTATTAATTTGGTATGGTCAAATAATATTCACACAAATAATAATGTTTCTCA
ATCCAATGAAACAAGTGATAAAGATTGGCTTAAAGGTTCAATTCTTCTTATTGGTGCTAC
TTTTGCATGGGCTTCTTTTTTTATACTTCAGGCTATTACAATGAAGAAGTACACTGCTCC
TTTGTCTCTTACTACACTTGTTTGCTTTATGGGAACTTTGCAATCAATTGCTGTCACCTT
AGTGATGGAACATAAACCTTCTGCTTGGGCTGTTGGTTTTGACATGAATCTTCTTGCTGC
TGCCTATGCTGGGATTGTATCATCAAGCCTTGCATATTATGTTCAAGGTCTTGTTATGGA
GAAAAGAGGACCTGTTTTTGTGACTGCTTTTAGTCCCTTGATGATGATTATTGTTGCCAT
CATGGGTTCTTTCATTCTTGCTGAGAAAATCTATCTTGGAGGTGTGCTTGGAGCAGTGTT
AATTGTAGCAGGGCTATACTCAGTTTTATGGGGAAAATACAAGGAGTACCAAGAAAAGGA
AATTGAGGGACCATTGAAAGGAGTAATGACAAATGACATAGAAATGCAAACAAGTGAAGT
AGTCATTGGTGTCCCCATGCAACAACCTACCATCTTGGCTAAGGAAGTTCCAAAAGCTTA
AAAAAAAAATCGTTCTATTCGATGCACTAAGCTTCTGTTATTAATTGTACAACTTTCAAG
AAAAAATCAGACCACAAGGGTCTATTAAGAAATAATTATAGAGAACAATAAAAAGAGAGT
TTGATTTAAAATTTAACGATGAGATGAAAAAGAAAAAGGAGGGATAATTTTAATTCACCC
TTTTAATCATGGGTATTTTGTTTTTTGTTTTTTGTTTTATGTAATGGTGGAAATAATGTA
ATTTTTTTTTGGTTCTATCGAATATAATACTTCGTACTAATATATTCTCATTTTTCTAGA
TAAATCTATTATAGAAAAG