Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g078190.2.1
CDS Infomation

cytosine-5 DNA methyltransferaseL1
Sequence

ATGGACAAAAATCTTTCTGGAGAAGATAATGATGACATTGACTGGGATACTGAAGATGAA
CTTGAAATACAAGAAATACAGGACACAGTGTTTTCCTCATGCACGGATTTAAGAACTACT
GGGCAGCATGTTGTTTGTTGCGATGTGGAGGCAAGCTCGTCATCAGTACCCTTCCGGTCC
AAGTTCATTCAGCAGTTTGTAGTGATGGGATTTCCTGAAGAATCTATTGCAAAAGCAATA
GAGCAAAACGGAGAAAATTCAGATTTGGTGCTGGATTCTCTTTTGACTTTTAAGGCCCTT
GATGACTCTCCTGAAGAACAGCCCAGTGTTAGCCCTCCGCTGGAACCCTCCATTAGTTCT
GATGACAGCGCTTCTGAATACAACAAGATTGTTTTGGATAATGTTTATGAGGATGATAGT
TGGTCTTCTGACTCAGACAACTACATAAATACTGTTAAGCAGTGCTACTTGAATGACGAG
GGAAGTTCTTTGTCTGAAAAAGAAAAGATGTTATTGTTCCTGGGAAATATGGGATATCCA
GCGGAAGAGGCCTCCATAGCAATGGATAGATGTGGTCCAAAAGCATCACTCCCTGAATTG
GTAGATTTTATTTGTGCTGCTCAAATGTCAAGAGCGGAAGATCCCTATCTCCTAGAAGAT
GTGAAGCCAAACCTGAAGGATATATTGAATGATTGTGGTGGATACAAAAAGAGGAAAATG
TACAATGAATTGTGCAAACGGAAAAAGCAAAGGGAGATTTCTGTTGAAGAGCCAATTCGA
TTGCCCAAGCCGATGATTGGCTTTGGAATTCCTACCGAATCAGTTCCAAGAATGGTTCAA
CGAATTCTTCCCGAGAAAATCATTGGCCCGCCTTATTTCTATTATGAAAATGTCGCCCTG
GCTCCAAAGGGTGTGTGGGACACCATTAAGAGGCATTTGTATGAGATTGAGCCCGAGTTT
GTTGACTCGAAGTACTTTTCTGCAACTGCAAGAAAAAGAGGGTATCTTCATAATCTGCCG
ATTGAAAACAGATTTCCTTTGTTTCCACTTCCCCCACGGACCATTCATGAGGCACTTCCC
CTTTCGAAGAGATGGTGGCCATCTTGGGATACTAGATCAAAGTTGAACTGCTTACAAACA
GCCATTGGGAGTGCAAGGTTGACGGATAAGATCAGGAAAGCTGTCGAGAAGTATGATGGT
GAACCACCTATGGAAATACAGAAGTATGTACTCTATCATTGCAAGAAGTGGAATTTGGTC
TGGGTAGGAAGAAACAAAGTTGCCCCTTTGGAACCTGATGAAGTTGAAATGCTATTGGGG
TTCCCAAAGAATCACACAAGGGGAGGAGGTATAAGTAGGACGGACAGATACAAGTCACTC
GGTAACTCTTTCCAGGTTGACACAGTGGCGTACCACTTATCAGTGTTGAGAGACTTGTTT
CCAAATGGAATCAATGTCTTATCACTCTTCTCTGGCATTGGTGGTGCTGAAGTTGCTCTC
TACCGTCTCGGTGTTCCCCTCAACAATGTTGTTTCAGTTGAAAAGTCTGAAGTGAACAGG
AATATTGTGAGAAGCTGGTGGGAGCAAACAAATCAGAGGGGGAATCTCATACATTTTGAC
GATGTGCAGCTGCTGAGCAGAGATCGGTTGAAGAAGTTAATAGAATCAGTTGGTGGATTT
GATTTAGTGATTGGTGGAAGCCCATGCAACAACCTTGCAGGCAGTAACAGGGTGAGCAGG
GATGGGCTTGAAGGCAAAGAGTCTTCTCTGTTTTTTGATTATGTTCGGATATTGGATGAT
GTCAAGTCCATAATGTCTAGACATAGATGA

Peptide Sequence

PEP ID

Solyc10g078190.2.1
PEP Infomation

cytosine-5 DNA methyltransferaseL1
Sequence

MDKNLSGEDNDDIDWDTEDELEIQEIQDTVFSSCTDLRTTGQHVVCCDVEASSSSVPFRS
KFIQQFVVMGFPEESIAKAIEQNGENSDLVLDSLLTFKALDDSPEEQPSVSPPLEPSISS
DDSASEYNKIVLDNVYEDDSWSSDSDNYINTVKQCYLNDEGSSLSEKEKMLLFLGNMGYP
AEEASIAMDRCGPKASLPELVDFICAAQMSRAEDPYLLEDVKPNLKDILNDCGGYKKRKM
YNELCKRKKQREISVEEPIRLPKPMIGFGIPTESVPRMVQRILPEKIIGPPYFYYENVAL
APKGVWDTIKRHLYEIEPEFVDSKYFSATARKRGYLHNLPIENRFPLFPLPPRTIHEALP
LSKRWWPSWDTRSKLNCLQTAIGSARLTDKIRKAVEKYDGEPPMEIQKYVLYHCKKWNLV
WVGRNKVAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLRDLF
PNGINVLSLFSGIGGAEVALYRLGVPLNNVVSVEKSEVNRNIVRSWWEQTNQRGNLIHFD
DVQLLSRDRLKKLIESVGGFDLVIGGSPCNNLAGSNRVSRDGLEGKESSLFFDYVRILDD
VKSIMSRHR*

Transcript Sequence

Transcript ID

Solyc10g078190.2.1
Transcript Infomation

cytosine-5 DNA methyltransferaseL1
Sequence

ATTTTATTAAAAGGATCGGAATAAAATATATCAATAATTGAGGGACCAAAAATAGTAGCG
AAAAAGTTTCCTCTGTTAAAGCAAAAAACGGAGAGGACTTTCTCGTCCAGTGTTGGAAGC
GTAAAACTCCAAATATGGGAATCTCTCTTATGCTTTAAAACCAAACAAGAATCTCTTCTT
CGTCAATTTTCTCTAAAATCTATGGATATCTGATATAGATCAAAATTGATTGTTGCATTG
ATCACTGAAAAATTTCAGGGTGCTGATTTATTCTTCTTGCTGAACAAATTGGAGTTCTTT
TTCAGGCTTACCTTGAGAAATGGACAAAAATCTTTCTGGAGAAGATAATGATGACATTGA
CTGGGATACTGAAGATGAACTTGAAATACAAGAAATACAGGACACAGTGTTTTCCTCATG
CACGGATTTAAGAACTACTGGGCAGCATGTTGTTTGTTGCGATGTGGAGGCAAGCTCGTC
ATCAGTACCCTTCCGGTCCAAGTTCATTCAGCAGTTTGTAGTGATGGGATTTCCTGAAGA
ATCTATTGCAAAAGCAATAGAGCAAAACGGAGAAAATTCAGATTTGGTGCTGGATTCTCT
TTTGACTTTTAAGGCCCTTGATGACTCTCCTGAAGAACAGCCCAGTGTTAGCCCTCCGCT
GGAACCCTCCATTAGTTCTGATGACAGCGCTTCTGAATACAACAAGATTGTTTTGGATAA
TGTTTATGAGGATGATAGTTGGTCTTCTGACTCAGACAACTACATAAATACTGTTAAGCA
GTGCTACTTGAATGACGAGGGAAGTTCTTTGTCTGAAAAAGAAAAGATGTTATTGTTCCT
GGGAAATATGGGATATCCAGCGGAAGAGGCCTCCATAGCAATGGATAGATGTGGTCCAAA
AGCATCACTCCCTGAATTGGTAGATTTTATTTGTGCTGCTCAAATGTCAAGAGCGGAAGA
TCCCTATCTCCTAGAAGATGTGAAGCCAAACCTGAAGGATATATTGAATGATTGTGGTGG
ATACAAAAAGAGGAAAATGTACAATGAATTGTGCAAACGGAAAAAGCAAAGGGAGATTTC
TGTTGAAGAGCCAATTCGATTGCCCAAGCCGATGATTGGCTTTGGAATTCCTACCGAATC
AGTTCCAAGAATGGTTCAACGAATTCTTCCCGAGAAAATCATTGGCCCGCCTTATTTCTA
TTATGAAAATGTCGCCCTGGCTCCAAAGGGTGTGTGGGACACCATTAAGAGGCATTTGTA
TGAGATTGAGCCCGAGTTTGTTGACTCGAAGTACTTTTCTGCAACTGCAAGAAAAAGAGG
GTATCTTCATAATCTGCCGATTGAAAACAGATTTCCTTTGTTTCCACTTCCCCCACGGAC
CATTCATGAGGCACTTCCCCTTTCGAAGAGATGGTGGCCATCTTGGGATACTAGATCAAA
GTTGAACTGCTTACAAACAGCCATTGGGAGTGCAAGGTTGACGGATAAGATCAGGAAAGC
TGTCGAGAAGTATGATGGTGAACCACCTATGGAAATACAGAAGTATGTACTCTATCATTG
CAAGAAGTGGAATTTGGTCTGGGTAGGAAGAAACAAAGTTGCCCCTTTGGAACCTGATGA
AGTTGAAATGCTATTGGGGTTCCCAAAGAATCACACAAGGGGAGGAGGTATAAGTAGGAC
GGACAGATACAAGTCACTCGGTAACTCTTTCCAGGTTGACACAGTGGCGTACCACTTATC
AGTGTTGAGAGACTTGTTTCCAAATGGAATCAATGTCTTATCACTCTTCTCTGGCATTGG
TGGTGCTGAAGTTGCTCTCTACCGTCTCGGTGTTCCCCTCAACAATGTTGTTTCAGTTGA
AAAGTCTGAAGTGAACAGGAATATTGTGAGAAGCTGGTGGGAGCAAACAAATCAGAGGGG
GAATCTCATACATTTTGACGATGTGCAGCTGCTGAGCAGAGATCGGTTGAAGAAGTTAAT
AGAATCAGTTGGTGGATTTGATTTAGTGATTGGTGGAAGCCCATGCAACAACCTTGCAGG
CAGTAACAGGGTGAGCAGGGATGGGCTTGAAGGCAAAGAGTCTTCTCTGTTTTTTGATTA
TGTTCGGATATTGGATGATGTCAAGTCCATAATGTCTAGACATAGATGAGATACTCTCTC
TGATTTAGATATCCTATTCCTTTTTCTCAACCTTGCCAAGGCTTAAGGTTATTCTTAATT
AGTAGGGTGAAATCAAACTAGATACTAATTGCAATTATGAAACTGATGAAATTTTGGTGG
TTGATGAAGTAATGTTATTGTTTCTGGTTCAGTTTTTCCAGAACCAGGTATCTAAAGAAT
ATATAAGAGTATATCACTTCATCCTTTCTATTATACAAGCTTAATTGCTCTAGAGTAATT
CCAATGGCCTCATCCTCTTTCAATCTTTTCACAGTAATAATCAA