Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g076910.2.1
CDS Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9SMB4_RICCO)
Sequence	ATGCAGAAAGGAGATGCTGGACCAATTGATCTGGACAAGACAACAACGACATTGGAACCT GATAAGACGAGCAGTGGGGGTCTTTTTGTTCCTGGGAAGGAGAGAGTAGTTTTTAAACCT TCTGAGCGGAAATCACTTCTAGGGCTTGATGCATTGGCGATTGCTAAAAGGGGAGGGGCT ACTGTAGAGAGTGAATTTAAAGTTCCAAGGGAGAGACTTGCTTCAATTGCGTCATCTTTA GATGAGGATGAAGAGTCATCTGCTGTTTCTGGAATTGATGAGTTGGGACATACTGCATCT AATGTTTCACGGAATAATGTACGGAGGAGGTATCGTGAATCTTATGCTAGTGAGACATCT GCTTCAGGTAGTGCAGTAACCGATGAACGGGGAGATGCTGAGACAGTCGTGAGGTCTCAC TTGAATGAGAACACAGAGGTTCCACCTGTATCTTCTGGGAGTTTACGTTCTACGATATCT AGGGGCGAGTCAGTTGACCGTGAAAGAGATGGAAGTGAATACAGGGATAATTACAGAAGT GAAAGCAGGGAAGGGAGAAGGAGAGATAGAAGAACCAGCAGGGAAGAGCGCCACCATAGG GATTCATCACGTGGTTATGAAAGAGAATATGATGGGGATGACGGAAGAAAAAGAAGTAGA TATGATGGTTTCAGGAGGACTCCTGGAAGATCGGAATGGGATGATGGTAGATGGGAGTGG CAAGATACCCCTCGTCGTGATAGTCGTTCCAGTAGTAGTAGCAGGCGTTATGAGCCTTCA CCATCACCAAAGTTTCTTGGAGCTTCACCTGATTCTCGACTTGTTTCACCATGGCTCGGG GATCATACTCCTCAATCTGCTGGAGCTGCTTCTCCGTGGGACAGTGTGGCTCCTTCTCCA ACTCCAATTAGGGCATCTGGGTCATCAGTAAGATCTTCAAGTTCCAGATATGGTGCTAAA TCCAGTTTGATTATGTCTTCTACAGGAGGTGCTCTGTCTGAGGACGGAGGAGATGATACA AATGGTGCCTCTGAAGATCAGAATGAAGAGATTACTGAAAGTATGCGTTTAGAGATGGAG TATAATTCAGATCGTGCCTGGTATGACCGCGAAGAAGGTAGTACAGTGTTTGAAGGGGAT GGTTCATCAGCATTTCTAGGTGATGAGGCATCTTTCCAGAAGAAAGAGGTGGAATTGGCC AAAAAACTGGTTCGTAGAGATGGAAGCAAGATGTCACTTGCTCAAAGTAAAAGGTTATCA CAGCTCACTGCAGACAATGCTCAATGGGAGGACCGCCAGCTTTTGAGATCTGGAGCTGTT AGAGGTACCGAGGTGCAGACGGAGTTTGATGATGAGGATGAACGGAAGGTTATTCTTCTT GTTCACGATACAAAGCCTCCCTTTTTGGATGGAAGAATTGTTTTCACCAAGCAAGCTGAG CCGATAATGCCAATAAAGGACCCAACTTCAGATATGGCCATAATTTCACGTAAAGGCTCA GCTCTAGTTCGGGAAATACGTGAAAAACAAAACATGCACAAGTCTCGACAAAGATTTTGG GAGCTGGCTGGTTCAAAACTCGGAGATATCCTTGGTGTTGAGAAGAGTGCAGAGCAGGTT GATGCGGATACTGCTACAGTGGGCGAGGATGGAGAGGTTGATTTTAAAGGAGAAGCTAGA TTCTCACAGCACTTAAAGAAAGGGGAAGCTGTCAGTGATTTTGCATTATCAAAAACACTT TCACAGCAAAGGCAGTATCTGCCCATCTTCTCTGTGCGAGATGATTTATTGCAGGTGGTT CGCGAAAACCAGGTGGTGGTGGTTGTTGGAGAAACTGGTTCTGGAAAGACAACACAGCTA ACTCAGTACCTTCATGAAGATGGCTATACAAGTAACGGGATTGTTGGTTGCACCCAACCC AGGCGTGTGGCAGCCATGAGTGTTGCAAAAAGAGTCAGTGAAGAAATGGAAACCGAGCTT GGTGATAAAGTTGGATATGCCATTCGTTTTGAAGATGTCACTGGGCCAACAACTGTTATC AAGTACATGACTGATGGTGTTCTTCTAAGGGAAACACTCAAAGATCCTGATCTTGAAAAA TATCGTGTAATTGTAATGGATGAGGCCCATGAGAGATCACTCAACACTGATGTCCTTTTT GGCATTCTTAAGAAAGTTGTGGCTAGGCGACGTGATTTTAAGCTTATTGTCACTTCTGCA ACTCTGAATGCCCAGAAGTTCTCTAACTTTTTTGGGAGCGTACCAATATTTCACATACCT GGAAGAACCTTTCCAGTAAATAAATTGTATAGTAAAACCCCATGTGAAGATTATGTCGAA GCTGCAGTTAAGCAAGCCATGACCATCCATATTACTAGTGCACCGGGTGATATACTCATC TTCATGACTGGTCAGGATGAGATTGAAGCTACCTGTTATGCACTTTCAGAGCGCATGGAA CAGCTTACCTCGTCAACAAAGCAAGCAGTGCCCAATCTATTGATTCTTCCTATATACTCT CAACTGCCCGCTGATTTGCAAGCAAAAATATTCCAGAAAGCTGAAGACGGGGCTCGAAAA TGCATAGTTGCTACTAATATTGCAGAAACATCCTTGACTGTCGATGGAATTTACTACGTC ATTGATACAGGCTATGGTAAAATGAAGGTGTACAATCCTCGTATGGGTATGGATGCTCTG CAAGTGTTCCCTATTAGTCGAGCTGCAGCTGACCAGCGTGCTGGTCGAGCTGGTAGAACT GGCCCAGGAACTTGTTACCGGCTTTATACTGAGAATGCGTATGAGAATGAAATGCTGCAA AGTCCCGTGCCAGAGATTCAACGGACAAATCTTGGGAATGTGGTTTTGCTGCTCAAGTCT CTCAAAATTCAGAACCTGTTGGATTTTGATTTTATGGACCCACCTCCTCAGGATAACATC CTTAACTCCATGTATCAGTTGTGGGTATTAGGTGCACTTAACAATGTTGGGGATTTAACA AGCCTTGGCTGGAAAATGGTGGAGTTCCCATTGGATCCTCCCCTTGCCAAAATGCTCTTG ATGGGAGAACAACTAGAATGTTTAAATGAGGTTCTGACTATTGTTTCTATGCTTTCAGTG CCTTCTGTTTTCTTTAGACCCAAGGATAGGGCTGAGGAAAGTGATGCTGCTAGGGAAAAG TTTTTTGTGCCAGAATCTGATCACCTTACACTGCTTAATGTTTACCAGCAATGGAAAGCT AATCAATACAGAGGGGACTGGTGTAATGACCACTATTTACAGGTCAAAGGTTTACGCAAG GCTAGGGAAGTAAGGTCTCAATTGCTGGATATCCTCAAGACACTTAAAATTCCACTCACT TCCTGTGGTCCTGATTGGGATGTTGTAAGGAAAGCCATCTGCTCTGCGTACTTCCATAAT GCAGCTAGGCTGAAAGGAGTTGGGGAATATGTTAATTGCAGGAATGGAATGCCTTGCCAC CTTCATCCCACTAGTGCTCTCTATGGATTGGGTTACACTCCTGATAACGTGGTTTATCAT GAGCTTATCTTGACATCAAAGGAGTACATGCAGTGTGTGACAGCTGTGGAGCCTCACTGG TTGGCTGAACTGGGGCCCATGTTTTTCTCCGTGAAAGATTCTGATACATCAATGCTGGAA CATAAAAAGAAACAGAAAGAGGAGAAAACTGCCATGGAGGAAGAAATGGAGAAGTTGCGT AAAGTACAGGCTGAAGCTGACAGACGAAACAAGGAGAAGGAGAAGGAAAAGAGAGCAAAA GAACTGCAACAGGTTTCTATGCCTGGGTTGAAGAAAGGCTCAACTACTTATTTACGACCC AAGAGGCTCGGTCTGTAA

Peptide Sequence

PEP ID	Solyc10g076910.2.1
PEP Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9SMB4_RICCO)
Sequence	MQKGDAGPIDLDKTTTTLEPDKTSSGGLFVPGKERVVFKPSERKSLLGLDALAIAKRGGA TVESEFKVPRERLASIASSLDEDEESSAVSGIDELGHTASNVSRNNVRRRYRESYASETS ASGSAVTDERGDAETVVRSHLNENTEVPPVSSGSLRSTISRGESVDRERDGSEYRDNYRS ESREGRRRDRRTSREERHHRDSSRGYEREYDGDDGRKRSRYDGFRRTPGRSEWDDGRWEW QDTPRRDSRSSSSSRRYEPSPSPKFLGASPDSRLVSPWLGDHTPQSAGAASPWDSVAPSP TPIRASGSSVRSSSSRYGAKSSLIMSSTGGALSEDGGDDTNGASEDQNEEITESMRLEME YNSDRAWYDREEGSTVFEGDGSSAFLGDEASFQKKEVELAKKLVRRDGSKMSLAQSKRLS QLTADNAQWEDRQLLRSGAVRGTEVQTEFDDEDERKVILLVHDTKPPFLDGRIVFTKQAE PIMPIKDPTSDMAIISRKGSALVREIREKQNMHKSRQRFWELAGSKLGDILGVEKSAEQV DADTATVGEDGEVDFKGEARFSQHLKKGEAVSDFALSKTLSQQRQYLPIFSVRDDLLQVV RENQVVVVVGETGSGKTTQLTQYLHEDGYTSNGIVGCTQPRRVAAMSVAKRVSEEMETEL GDKVGYAIRFEDVTGPTTVIKYMTDGVLLRETLKDPDLEKYRVIVMDEAHERSLNTDVLF GILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFHIPGRTFPVNKLYSKTPCEDYVE AAVKQAMTIHITSAPGDILIFMTGQDEIEATCYALSERMEQLTSSTKQAVPNLLILPIYS QLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIYYVIDTGYGKMKVYNPRMGMDAL QVFPISRAAADQRAGRAGRTGPGTCYRLYTENAYENEMLQSPVPEIQRTNLGNVVLLLKS LKIQNLLDFDFMDPPPQDNILNSMYQLWVLGALNNVGDLTSLGWKMVEFPLDPPLAKMLL MGEQLECLNEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYQQWKA NQYRGDWCNDHYLQVKGLRKAREVRSQLLDILKTLKIPLTSCGPDWDVVRKAICSAYFHN AARLKGVGEYVNCRNGMPCHLHPTSALYGLGYTPDNVVYHELILTSKEYMQCVTAVEPHW LAELGPMFFSVKDSDTSMLEHKKKQKEEKTAMEEEMEKLRKVQAEADRRNKEKEKEKRAK ELQQVSMPGLKKGSTTYLRPKRLGL*

Transcript Sequence

Transcript ID	Solyc10g076910.2.1
Transcript Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9SMB4_RICCO)
Sequence	TAGTTCAAGGGCTAGAACTTGGCCTTCATCAGATTTGTTTGTTTTTTTCTCTCTTCCTAT GTATGTATGCATCTTCTTCATCTTTTGGGTTAATCTCGACTTGTGTTTCTTTGTTTAACC TGCCGATTTTATCTCCTTTTCTTGTGCGATTTGCCCTCTTCGTTTGAACTGAATTTGGGG CTTTTTGGTTCTTTCGGCGATTTGTAACTTTGAGGTTTTGCGGTCTAAAATCACTGCTTT GATTGCTTTTGGGTTGAACTGCTCTTGCAGTGAGTACAGGTTTAGCTTATTAAGAGTTGC TAGGAACATGCAGAAAGGAGATGCTGGACCAATTGATCTGGACAAGACAACAACGACATT GGAACCTGATAAGACGAGCAGTGGGGGTCTTTTTGTTCCTGGGAAGGAGAGAGTAGTTTT TAAACCTTCTGAGCGGAAATCACTTCTAGGGCTTGATGCATTGGCGATTGCTAAAAGGGG AGGGGCTACTGTAGAGAGTGAATTTAAAGTTCCAAGGGAGAGACTTGCTTCAATTGCGTC ATCTTTAGATGAGGATGAAGAGTCATCTGCTGTTTCTGGAATTGATGAGTTGGGACATAC TGCATCTAATGTTTCACGGAATAATGTACGGAGGAGGTATCGTGAATCTTATGCTAGTGA GACATCTGCTTCAGGTAGTGCAGTAACCGATGAACGGGGAGATGCTGAGACAGTCGTGAG GTCTCACTTGAATGAGAACACAGAGGTTCCACCTGTATCTTCTGGGAGTTTACGTTCTAC GATATCTAGGGGCGAGTCAGTTGACCGTGAAAGAGATGGAAGTGAATACAGGGATAATTA CAGAAGTGAAAGCAGGGAAGGGAGAAGGAGAGATAGAAGAACCAGCAGGGAAGAGCGCCA CCATAGGGATTCATCACGTGGTTATGAAAGAGAATATGATGGGGATGACGGAAGAAAAAG AAGTAGATATGATGGTTTCAGGAGGACTCCTGGAAGATCGGAATGGGATGATGGTAGATG GGAGTGGCAAGATACCCCTCGTCGTGATAGTCGTTCCAGTAGTAGTAGCAGGCGTTATGA GCCTTCACCATCACCAAAGTTTCTTGGAGCTTCACCTGATTCTCGACTTGTTTCACCATG GCTCGGGGATCATACTCCTCAATCTGCTGGAGCTGCTTCTCCGTGGGACAGTGTGGCTCC TTCTCCAACTCCAATTAGGGCATCTGGGTCATCAGTAAGATCTTCAAGTTCCAGATATGG TGCTAAATCCAGTTTGATTATGTCTTCTACAGGAGGTGCTCTGTCTGAGGACGGAGGAGA TGATACAAATGGTGCCTCTGAAGATCAGAATGAAGAGATTACTGAAAGTATGCGTTTAGA GATGGAGTATAATTCAGATCGTGCCTGGTATGACCGCGAAGAAGGTAGTACAGTGTTTGA AGGGGATGGTTCATCAGCATTTCTAGGTGATGAGGCATCTTTCCAGAAGAAAGAGGTGGA ATTGGCCAAAAAACTGGTTCGTAGAGATGGAAGCAAGATGTCACTTGCTCAAAGTAAAAG GTTATCACAGCTCACTGCAGACAATGCTCAATGGGAGGACCGCCAGCTTTTGAGATCTGG AGCTGTTAGAGGTACCGAGGTGCAGACGGAGTTTGATGATGAGGATGAACGGAAGGTTAT TCTTCTTGTTCACGATACAAAGCCTCCCTTTTTGGATGGAAGAATTGTTTTCACCAAGCA AGCTGAGCCGATAATGCCAATAAAGGACCCAACTTCAGATATGGCCATAATTTCACGTAA AGGCTCAGCTCTAGTTCGGGAAATACGTGAAAAACAAAACATGCACAAGTCTCGACAAAG ATTTTGGGAGCTGGCTGGTTCAAAACTCGGAGATATCCTTGGTGTTGAGAAGAGTGCAGA GCAGGTTGATGCGGATACTGCTACAGTGGGCGAGGATGGAGAGGTTGATTTTAAAGGAGA AGCTAGATTCTCACAGCACTTAAAGAAAGGGGAAGCTGTCAGTGATTTTGCATTATCAAA AACACTTTCACAGCAAAGGCAGTATCTGCCCATCTTCTCTGTGCGAGATGATTTATTGCA GGTGGTTCGCGAAAACCAGGTGGTGGTGGTTGTTGGAGAAACTGGTTCTGGAAAGACAAC ACAGCTAACTCAGTACCTTCATGAAGATGGCTATACAAGTAACGGGATTGTTGGTTGCAC CCAACCCAGGCGTGTGGCAGCCATGAGTGTTGCAAAAAGAGTCAGTGAAGAAATGGAAAC CGAGCTTGGTGATAAAGTTGGATATGCCATTCGTTTTGAAGATGTCACTGGGCCAACAAC TGTTATCAAGTACATGACTGATGGTGTTCTTCTAAGGGAAACACTCAAAGATCCTGATCT TGAAAAATATCGTGTAATTGTAATGGATGAGGCCCATGAGAGATCACTCAACACTGATGT CCTTTTTGGCATTCTTAAGAAAGTTGTGGCTAGGCGACGTGATTTTAAGCTTATTGTCAC TTCTGCAACTCTGAATGCCCAGAAGTTCTCTAACTTTTTTGGGAGCGTACCAATATTTCA CATACCTGGAAGAACCTTTCCAGTAAATAAATTGTATAGTAAAACCCCATGTGAAGATTA TGTCGAAGCTGCAGTTAAGCAAGCCATGACCATCCATATTACTAGTGCACCGGGTGATAT ACTCATCTTCATGACTGGTCAGGATGAGATTGAAGCTACCTGTTATGCACTTTCAGAGCG CATGGAACAGCTTACCTCGTCAACAAAGCAAGCAGTGCCCAATCTATTGATTCTTCCTAT ATACTCTCAACTGCCCGCTGATTTGCAAGCAAAAATATTCCAGAAAGCTGAAGACGGGGC TCGAAAATGCATAGTTGCTACTAATATTGCAGAAACATCCTTGACTGTCGATGGAATTTA CTACGTCATTGATACAGGCTATGGTAAAATGAAGGTGTACAATCCTCGTATGGGTATGGA TGCTCTGCAAGTGTTCCCTATTAGTCGAGCTGCAGCTGACCAGCGTGCTGGTCGAGCTGG TAGAACTGGCCCAGGAACTTGTTACCGGCTTTATACTGAGAATGCGTATGAGAATGAAAT GCTGCAAAGTCCCGTGCCAGAGATTCAACGGACAAATCTTGGGAATGTGGTTTTGCTGCT CAAGTCTCTCAAAATTCAGAACCTGTTGGATTTTGATTTTATGGACCCACCTCCTCAGGA TAACATCCTTAACTCCATGTATCAGTTGTGGGTATTAGGTGCACTTAACAATGTTGGGGA TTTAACAAGCCTTGGCTGGAAAATGGTGGAGTTCCCATTGGATCCTCCCCTTGCCAAAAT GCTCTTGATGGGAGAACAACTAGAATGTTTAAATGAGGTTCTGACTATTGTTTCTATGCT TTCAGTGCCTTCTGTTTTCTTTAGACCCAAGGATAGGGCTGAGGAAAGTGATGCTGCTAG GGAAAAGTTTTTTGTGCCAGAATCTGATCACCTTACACTGCTTAATGTTTACCAGCAATG GAAAGCTAATCAATACAGAGGGGACTGGTGTAATGACCACTATTTACAGGTCAAAGGTTT ACGCAAGGCTAGGGAAGTAAGGTCTCAATTGCTGGATATCCTCAAGACACTTAAAATTCC ACTCACTTCCTGTGGTCCTGATTGGGATGTTGTAAGGAAAGCCATCTGCTCTGCGTACTT CCATAATGCAGCTAGGCTGAAAGGAGTTGGGGAATATGTTAATTGCAGGAATGGAATGCC TTGCCACCTTCATCCCACTAGTGCTCTCTATGGATTGGGTTACACTCCTGATAACGTGGT TTATCATGAGCTTATCTTGACATCAAAGGAGTACATGCAGTGTGTGACAGCTGTGGAGCC TCACTGGTTGGCTGAACTGGGGCCCATGTTTTTCTCCGTGAAAGATTCTGATACATCAAT GCTGGAACATAAAAAGAAACAGAAAGAGGAGAAAACTGCCATGGAGGAAGAAATGGAGAA GTTGCGTAAAGTACAGGCTGAAGCTGACAGACGAAACAAGGAGAAGGAGAAGGAAAAGAG AGCAAAAGAACTGCAACAGGTTTCTATGCCTGGGTTGAAGAAAGGCTCAACTACTTATTT ACGACCCAAGAGGCTCGGTCTGTAAATTACACTTTTTGCTGTAGTTGTTAGATATCTGTT GTGATGATTCTTGTCCCAGTGCAAAAACCACGTACAATTCTTAGCCTATCTCTTAGTCAT CCTCAAATTAATTTAGTGGATGGAGATTCAGAGAAGTAAAAATTCAAAAGAAAGTATACA GTGAACAAAAGCATGTATAACTCCTTCATATGGTTATCATCTTTACCCCTTGCAGCCCTG AATTTGACGTGTTTGTATAAGTTTCTTGATAAAACAGTTACATTTTCTCCTTTGCTTTTG GCAGCATTCAGATTGCACATTTGCTACTATTGTTGTATTACATTATCTTCTTATCTGGAG