Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g076660.2.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G05600.1)
Sequence

ATGAGTAATTGTTTGCAAAGCTGGCCGGAGCCAATTGTCCGAGTTCAAGGACTCTCGGAA
AGTGGCATTCGAGAAATCCCTGACCGGTACGTGAAACGACCATCGGATCGTCCATGTTTC
AAGGAGACAACAACGTTGTCGTCATCATCACACCTTGAGAATATTCCGTTAATTGACCTT
GAAAACTTGAATTCATCGGATGAATCCATTCGCGATGAGACAATGGAACTCATTTCCAAG
GCTTGTCGCGAATGGGGTTTCTTCCAAGTGGTGAACCACGGCGTTAGCCATGAACTTATG
GCTAACGCACGTAGCGTCTGGCGGGAGTTCTTTCATCTCCCGCCAGAGGAAAAACAAAAG
TTTGCGAATTCACCCGTTACTTATGAAGGATATGGAAGTAGACTTGGAGTTGAAAAAGGT
GGAAAATTGGATTGGAGTGATTATTTCTTCCTCCATTATCTTCCTGAGCCTTTGAGGGAT
TACAACAAATGGCCTTCCCTTCCCATTACATGCAGGAAAATAATTGGTGAATATGGACAA
GAAGTAGTAAAATTAGGTCGAAAAATAACAAATATCTTGTCGATTAACCTTGGATTAAAT
GAAAATTATCTACACACAAAATTTGGTGGAGACAATGAAAGAGGTGCATGTTTAAGGGTT
AACTTTTACCCTAGATGTCCCCAACCTGACCTAACACTTGGACTCTCTTCCCACTCTGAT
CCTGGTGGCATGACCCTTCTCCTCCCCGACACCGACGTCCCCGGCCTCCAAGTCCGTCGT
GGTGATGACTGGATAACGGTTAAACCGATTCCTAATGCCTTTATCGTTAATATTGGAGAT
CAAATTCAGGTACTAAGCAATGCAATATACAAAAGCATAGAGCATCGCGTGATCGTTAAT
TCAGGGCAAGAACGTGTCTCTTTAGCATTTTTCTACAATCCAGGAGGTGACATCCTTATT
CAACCTGCTGAAGAACTTGTGACGGAGGATCAGCCGGCGTTATATTTACCGACGACGTTC
AACGAGTATCGAGCTTTCATTAGAACAAACGGACCTAGAGGAAAATCTCAAGTTGAATCA
CTAAAATCGCCGAGATAA

Peptide Sequence

PEP ID

Solyc10g076660.2.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G05600.1)
Sequence

MSNCLQSWPEPIVRVQGLSESGIREIPDRYVKRPSDRPCFKETTTLSSSSHLENIPLIDL
ENLNSSDESIRDETMELISKACREWGFFQVVNHGVSHELMANARSVWREFFHLPPEEKQK
FANSPVTYEGYGSRLGVEKGGKLDWSDYFFLHYLPEPLRDYNKWPSLPITCRKIIGEYGQ
EVVKLGRKITNILSINLGLNENYLHTKFGGDNERGACLRVNFYPRCPQPDLTLGLSSHSD
PGGMTLLLPDTDVPGLQVRRGDDWITVKPIPNAFIVNIGDQIQVLSNAIYKSIEHRVIVN
SGQERVSLAFFYNPGGDILIQPAEELVTEDQPALYLPTTFNEYRAFIRTNGPRGKSQVES
LKSPR*

Transcript Sequence

Transcript ID

Solyc10g076660.2.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G05600.1)
Sequence

AAACTCTCTGTTTGTGCATATATAAATATGTCTCCACATCTTCACAAAATCTTAACTACT
ACTTCTATCTCCATTTGCTTTTAATTAGTAGTGACATAAATATATACATAGACTCTTTCT
TGTATCTTTATTTGCAATATAAATTATACTACGTGTCTACACGATAACATAAAATCTCCT
TTTTGCTATCTCTTTTCTCTATATATGGCTTTTGAATTCATGAAAATCACGTTCTCAAGC
TCACGTCAACTTCGAAAATTCTTTATATCACTATAATCCACAACCAAAGACTTTTAAGCC
TCATATAATCACAACCACAACCTATCTTGTATGAGATAAATTTCAAGTGCTATAAATATA
CCTAACGAAAAGTTATAGTTAGCAGTACTGAAAAAAACGAGATAAACATGAGTAATTGTT
TGCAAAGCTGGCCGGAGCCAATTGTCCGAGTTCAAGGACTCTCGGAAAGTGGCATTCGAG
AAATCCCTGACCGGTACGTGAAACGACCATCGGATCGTCCATGTTTCAAGGAGACAACAA
CGTTGTCGTCATCATCACACCTTGAGAATATTCCGTTAATTGACCTTGAAAACTTGAATT
CATCGGATGAATCCATTCGCGATGAGACAATGGAACTCATTTCCAAGGCTTGTCGCGAAT
GGGGTTTCTTCCAAGTGGTGAACCACGGCGTTAGCCATGAACTTATGGCTAACGCACGTA
GCGTCTGGCGGGAGTTCTTTCATCTCCCGCCAGAGGAAAAACAAAAGTTTGCGAATTCAC
CCGTTACTTATGAAGGATATGGAAGTAGACTTGGAGTTGAAAAAGGTGGAAAATTGGATT
GGAGTGATTATTTCTTCCTCCATTATCTTCCTGAGCCTTTGAGGGATTACAACAAATGGC
CTTCCCTTCCCATTACATGCAGGAAAATAATTGGTGAATATGGACAAGAAGTAGTAAAAT
TAGGTCGAAAAATAACAAATATCTTGTCGATTAACCTTGGATTAAATGAAAATTATCTAC
ACACAAAATTTGGTGGAGACAATGAAAGAGGTGCATGTTTAAGGGTTAACTTTTACCCTA
GATGTCCCCAACCTGACCTAACACTTGGACTCTCTTCCCACTCTGATCCTGGTGGCATGA
CCCTTCTCCTCCCCGACACCGACGTCCCCGGCCTCCAAGTCCGTCGTGGTGATGACTGGA
TAACGGTTAAACCGATTCCTAATGCCTTTATCGTTAATATTGGAGATCAAATTCAGGTAC
TAAGCAATGCAATATACAAAAGCATAGAGCATCGCGTGATCGTTAATTCAGGGCAAGAAC
GTGTCTCTTTAGCATTTTTCTACAATCCAGGAGGTGACATCCTTATTCAACCTGCTGAAG
AACTTGTGACGGAGGATCAGCCGGCGTTATATTTACCGACGACGTTCAACGAGTATCGAG
CTTTCATTAGAACAAACGGACCTAGAGGAAAATCTCAAGTTGAATCACTAAAATCGCCGA
GATAAATGTCCTTTAGCATGACCCCGACACGCACAAAACGAGAAATAATCCAATTATAAA
GATAATTAAATTACCTTTATATGTTCTATATAGTAAGTATATGGTACTTAAGGAAGTTTT
ACTGCGTATAAATTCCAATTGGTAAAACATAACACAGTAAATACCCTATGTCCCTATATG
ATGTACTAGTACAATATGTGTTGTCATTTTCCTATGTTATTTTCAAATGTTTTGTCAAAT
TCACTTTGCTTTGTGAAATATTGTATTCATCCCTTCAATAGATATATGGTTCATCTAATT
AATAAAATATTATGGTATTAATTGTAAGTTCATTATATGATCAACTATTTGATAATGGAA
TCGGAGTTAGTTCA