Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g076320.2.1
CDS Infomation

Protein phosphatase-2c, putative (AHRD V3.3 *** B9SL27_RICCO)
Sequence

ATGTATAGTCAACAAGGTAAAAAAGGGATCAATCAAGATGCCATGACTGTTTGGGAGGGG
ATTGATACTATTGTAACACGCTATATATTATTGTTACAGAATTTTGGTGGACAGAAAGGT
ATGATCTTTTGTGGTGTATTTGATGGACACGGACCATCCGGCCACAAGGTGGCACGTTAT
GTTAGAGACACGTTACCTTCTAAACTTTCATCATCCAATGTGATCAGTGCCAATAGATGG
GATGCTGAAAAGGATGATGAATCTAACAACCCAGTCTTTGATGCTTGGAAAGATAAATTT
ATCATGTCTTTTAAAGAAATGGATGAAGAACTTGAAGGTGATGGTTCTATCGAAAGTTAT
TGCAGTGGAACAACTGCAGTGACTTTAGTTAAACAGGGAGAACATTTGATAGTTGGAAAT
TTAGGAGATTCTCGAGCTATTATTTGCACCAGGGATGACAAAAATGAGCTTGTTGCTAAG
CAACTCACGGTAGACTTGAAACCTAACCTCCCAGCTGAATATGAAAGAATCAAGAGTTGT
GAAGGAAGAGTAATGGCGATGGAGGAAGAACCAAATATATACAGAGTATGGATGCCTGAT
CAAGATTGCCCTGGTCTTGCCATGGCTAGAGCTTTCGGAGATTTTTGTTTGAAAGACTTT
GGTCTCATTTCGGTACCTGAAGTATATTACAGAAAGCTCACTGAAAAGGATGAATTCATT
GTCTTGGCATCAGACGGGTTGTGGGATGTTTTAAGCAACAATGAAGTGATCCGGATAGTA
GCTTCAGCAAGGAAACGATCTATTGCAGCAAGACTCGTGGTGCATCATGCAGTTCGAGCC
TGGAAATACAAGTACCCGTGTGCCAAGGTAGATGATTGTGCTGTTGTATGTTTGTTCTTG
AAACGCCAGAAGCCTCTGCTAACGAAATCGTTGTCAGAAGTAACCGAGCTGAGCTTAAAT
TACTCAGAGATAGCAACCAGCAAAAACTACTCACCAAACTCCAAGATAGATGATGGTCTT
GATACACTGCTAAATTATCAAGTCAAGGAAGAAAAAGATCCAAATGTTGCAACTGGACTT
TATGATGATCATAAAAAGAGTTCTTCGAGGCATGCTCGTTACCTTAGCAGAAGAAAATCT
ACAGTGAATTTTTGA

Peptide Sequence

PEP ID

Solyc10g076320.2.1
PEP Infomation

Protein phosphatase-2c, putative (AHRD V3.3 *** B9SL27_RICCO)
Sequence

MYSQQGKKGINQDAMTVWEGIDTIVTRYILLLQNFGGQKGMIFCGVFDGHGPSGHKVARY
VRDTLPSKLSSSNVISANRWDAEKDDESNNPVFDAWKDKFIMSFKEMDEELEGDGSIESY
CSGTTAVTLVKQGEHLIVGNLGDSRAIICTRDDKNELVAKQLTVDLKPNLPAEYERIKSC
EGRVMAMEEEPNIYRVWMPDQDCPGLAMARAFGDFCLKDFGLISVPEVYYRKLTEKDEFI
VLASDGLWDVLSNNEVIRIVASARKRSIAARLVVHHAVRAWKYKYPCAKVDDCAVVCLFL
KRQKPLLTKSLSEVTELSLNYSEIATSKNYSPNSKIDDGLDTLLNYQVKEEKDPNVATGL
YDDHKKSSSRHARYLSRRKSTVNF*

Transcript Sequence

Transcript ID

Solyc10g076320.2.1
Transcript Infomation

Protein phosphatase-2c, putative (AHRD V3.3 *** B9SL27_RICCO)
Sequence

GGGGAGCATAAAGAAGGTGATGATGATTATCAAAGCATAGTAGGAAGAGGAGATTTGGGT
GCTAATATAAGGTTATGTGGATTTTCTAAATTTGTATCAATGTATAGTCAACAAGGTAAA
AAAGGGATCAATCAAGATGCCATGACTGTTTGGGAGGGGATTGATACTATTGTAACACGC
TATATATTATTGTTACAGAATTTTGGTGGACAGAAAGGTATGATCTTTTGTGGTGTATTT
GATGGACACGGACCATCCGGCCACAAGGTGGCACGTTATGTTAGAGACACGTTACCTTCT
AAACTTTCATCATCCAATGTGATCAGTGCCAATAGATGGGATGCTGAAAAGGATGATGAA
TCTAACAACCCAGTCTTTGATGCTTGGAAAGATAAATTTATCATGTCTTTTAAAGAAATG
GATGAAGAACTTGAAGGTGATGGTTCTATCGAAAGTTATTGCAGTGGAACAACTGCAGTG
ACTTTAGTTAAACAGGGAGAACATTTGATAGTTGGAAATTTAGGAGATTCTCGAGCTATT
ATTTGCACCAGGGATGACAAAAATGAGCTTGTTGCTAAGCAACTCACGGTAGACTTGAAA
CCTAACCTCCCAGCTGAATATGAAAGAATCAAGAGTTGTGAAGGAAGAGTAATGGCGATG
GAGGAAGAACCAAATATATACAGAGTATGGATGCCTGATCAAGATTGCCCTGGTCTTGCC
ATGGCTAGAGCTTTCGGAGATTTTTGTTTGAAAGACTTTGGTCTCATTTCGGTACCTGAA
GTATATTACAGAAAGCTCACTGAAAAGGATGAATTCATTGTCTTGGCATCAGACGGGTTG
TGGGATGTTTTAAGCAACAATGAAGTGATCCGGATAGTAGCTTCAGCAAGGAAACGATCT
ATTGCAGCAAGACTCGTGGTGCATCATGCAGTTCGAGCCTGGAAATACAAGTACCCGTGT
GCCAAGGTAGATGATTGTGCTGTTGTATGTTTGTTCTTGAAACGCCAGAAGCCTCTGCTA
ACGAAATCGTTGTCAGAAGTAACCGAGCTGAGCTTAAATTACTCAGAGATAGCAACCAGC
AAAAACTACTCACCAAACTCCAAGATAGATGATGGTCTTGATACACTGCTAAATTATCAA
GTCAAGGAAGAAAAAGATCCAAATGTTGCAACTGGACTTTATGATGATCATAAAAAGAGT
TCTTCGAGGCATGCTCGTTACCTTAGCAGAAGAAAATCTACAGTGAATTTTTGAGTCCAT
TGTAATGAAGCAGTAATGAGTAAAATTGAAAAGGAAAAAAAGAAGTTGTAAGCTACAAAT
TTGAATGAAATACGTGTATGTATTTTGGTTTGTATAGTAGTAAAAAAAAAAAAAGATGAC
AAAATCAGGAATTGATACCTTGAAGAGTTGAAAAATGTTATTTGCTACTTGCTATATAAC
CTAGCTAATTAACTAGAAAGGAACAAGACATTGTGATGAATCATGATAACAGTTCGGGTC
GAAGATCGGGGGAAGTTTAAAAGATGAGGAAACCTAGCCGCTTCTGGTCAGGGTGAGGAT
AAGTTTTTGCTTCTTCACAAACTTATCCCCACAAATCCGACCTTGTAAGGCTAGTGCTTG
GTGTTCGTATATTCTATCATGTTCAGATTCACAACTAATATTAAAGTAACTAGTGAAGTA
GTTTCCATAACATTACATTTTCTTCAATGGCTAATAGATTGATTGATCAATATTGTTCTA
TTATTTCTCTATGTCATATATTAATAACAAATTGATTGCACCTATAATTGAAATGTAAAT
TAAACCTTTTTCTTATAATAACCGTGAAATATTACTATACGAATAAAATAAAATTAATAC
ATCGACAATTATAACCATCTTTCAGGAAGAATGTCAAAGTTAGAAATTAAAAAAGCGCGA
TCTTAGCTAGAAATATTCCACGGTGATGTATGCATTCCCCTCATCATCCTTGTTAGCTCC
AAATCAGTTATTCAAATTGTACACTTGTAAGAACATTTCTCATGCTATCTGCATTCTCTA
ATCTCCACTATATTTTACAATAATATAGCAAAAAAAATTTCTCTTTTATTTTTATGGTTT
TGAAGATTATTCTTTTAGTTGCCAAAAACAACTAAAACTAGAGGCATATTATAAAATAAA
AGAGAAACCCCAAAAAGGTAAAAAAGATAAAAAGAATTTACTAATGATCATTGAATTTTC
AAAAGTAATTTTGTTAAGGTATATCGTAACGTTTTACAAGATGGTCAAATAGTTCCATTT
TACACATGAAAAAATAAGATATATTTCACATAGAGTACAATTTTTACCTCTCACATTAGG
ATTAACAGTAT