Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g074980.2.1
CDS Infomation

Vacuolar sorting receptor family protein (AHRD V3.3 *** B9HDJ2_POPTR)
Sequence

ATGAAGGAAAAGCTAGGGTTTTTAGTGTGTGTTTGGTTTCTTGTAATTGGGTCTTGTTTG
GGTAGATTTGTGGTGGAAAAGAATAGCTTGAGGGTAACTTCTCCAGACTCGATCAAAAAT
GTGTATGAGTGTGCAATTGGGAATTTTGGGGTTCCACAATATGGAGGAACTATGGTTGGT
ATTGTTATGTACCCTAAAGCTAATCAGAAGTCCTGCAAGGATTTTGCAGATTCTGATATT
TCATTCAAAACTAAGGCTGGTGGTATGCCTGTTTTCGTCCTTGTCGATAGAGGAGACTGC
TATTTCACACTTAAGGCTTGGAATGCTCAAAAGGCTGGAGCTGCTGCTATTCTTGTTGCT
GATGATCGCAATGAACCTTTGATTACCATGGACACTCCTGAGGAAGAGGATGCAAAGGCA
GATTATCTGCAAAATATAACTATTCCGTCAGCTCTAATTAGTCAATCGCTTGGGGATAGC
ATCAAGAAGCAACTATCTAAAGGGGAGATGGTTAACATAAACCTGGATTGGAGAGAGGCT
CTTCCGCATCCTGATGAAAGAGTTGAGTACGAGTTTTGGACCAACAGTAATGATGAGTGT
GGTCCTAAGTGTGAAAGCCAGAGAGAGTTTGTCAAAAACTTCAAAGGGGCTGCCCAGATA
CTTGAGCAGAAGGGGTATACACAATTCAGTCCCCATTACATAACTTGGTATTGTCCTGAG
GCATTTATTTTGAGCAAGCAATGCAAGTCTCAGTGCATCAACCATGGGAGATACTGTGCT
CCAGATCCTGAGCAAGACTTCAGCAAAGGTTATGATGGGAAGGATGTTGTTTTACAAAAT
CTGCGCCAAGCTTGCTTTTATAAGGTTGCCAATGATAGCGGGAAGCCCTGGTTGTGGTGG
GACTACGTCACTGACTTTGGAATCCGGTGTCCAATGAAAGAGAAGAAGTACGATAAGGAG
TGTGCAGATCAAGTAATCACATCCCTTGGTTTTGATGTAAAACAGATAGATAAATGTGTT
GGAGATCCTGAAGCTGATGCTGATAACCCTATTCTAAAGGCTGAACAAGAAGCTCAGATT
GGAAAGAACTCTCGTGGAGATGTGACTATCTTGCCAACTCTTGTGATAAACAATAGGCAG
TACAGAGGCAAGTTGGACAAGGGAGCTGTTCTGAAGGCCATTTGTTCAGGTTTCGAGGAG
ACAACTGAGCCTGCAATTTGCTTAACCGATGATATACAAACAAATGAGTGCTTAGAGTCC
AATGGTGGGTGCTGGCAGGACACAGCTGCCAACATTACTGCATGCCGGGATACATTCCGT
GGGAAAGTCTGTGAGTGCCCGACGGTTCAGGGAGTAAAATTTGTTGGTGATGGTTATTCT
CACTGTGAAGCATCTGGAGCATTACGCTGTGGATTAAACAACGGAGGTTGTTGGAAGGGA
ACCAAGGATGGAAGGACATATTCTGCCTGCATAGATGACCACACAAAGGGTTGTAAATGT
CCACCAGGGTTCAAAGGAGATGGAGTGAATCTTTGTGAAGATATTGATGAATGCAAAGAA
AGGCTGGCATGCCAGTGTCCAGATTGTAAATGCAAGAATACCTGGGGTGGTTATCAATGC
AGTTGCAGCGGCAATTTATTGTACATGCAAGAACATGACACGTGTATAGGCAATGATGGA
AAAGCAGCATTTAGCTGGGGTCTTGTTTGGGTTATCATCTTGGGTTTGGCAGTTGCAGGA
GCTGGAGCATATGCCGTGTACAAGTATAGGATCCGGAGATATATGGATTCAGAGATCCGT
GCCATCATGGCACAGTACATGCCTTTGGATAATCAGGGAGAGGTGCCTAACCACATATCC
CACGGAAATGTCTGA

Peptide Sequence

PEP ID

Solyc10g074980.2.1
PEP Infomation

Vacuolar sorting receptor family protein (AHRD V3.3 *** B9HDJ2_POPTR)
Sequence

MKEKLGFLVCVWFLVIGSCLGRFVVEKNSLRVTSPDSIKNVYECAIGNFGVPQYGGTMVG
IVMYPKANQKSCKDFADSDISFKTKAGGMPVFVLVDRGDCYFTLKAWNAQKAGAAAILVA
DDRNEPLITMDTPEEEDAKADYLQNITIPSALISQSLGDSIKKQLSKGEMVNINLDWREA
LPHPDERVEYEFWTNSNDECGPKCESQREFVKNFKGAAQILEQKGYTQFSPHYITWYCPE
AFILSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVLQNLRQACFYKVANDSGKPWLWW
DYVTDFGIRCPMKEKKYDKECADQVITSLGFDVKQIDKCVGDPEADADNPILKAEQEAQI
GKNSRGDVTILPTLVINNRQYRGKLDKGAVLKAICSGFEETTEPAICLTDDIQTNECLES
NGGCWQDTAANITACRDTFRGKVCECPTVQGVKFVGDGYSHCEASGALRCGLNNGGCWKG
TKDGRTYSACIDDHTKGCKCPPGFKGDGVNLCEDIDECKERLACQCPDCKCKNTWGGYQC
SCSGNLLYMQEHDTCIGNDGKAAFSWGLVWVIILGLAVAGAGAYAVYKYRIRRYMDSEIR
AIMAQYMPLDNQGEVPNHISHGNV*

Transcript Sequence

Transcript ID

Solyc10g074980.2.1
Transcript Infomation

Vacuolar sorting receptor family protein (AHRD V3.3 *** B9HDJ2_POPTR)
Sequence

CCCACAAAATTTTATGTTTATGTATAAAAAAAACAATTTCATCACTTCAACACAGTTGAC
ACGTTGAATCTGTAGCTTTCGATTAGTTTTCTGTTTCTTTTTTCTTCTTTGTTAAGGTTC
TTTTTTGTTTACGCAGAGATTACATAGAGTCGCCTAAAAGTTGTTCTTGTAGGCTTAGAT
CACCAATATATGATCTGGGTATGATCTATTTTCTGTAAAGATCCGACCTTTATGTGAATT
TTCTAGGTTTGATAGCTTCTAGGTCTTAATTTTGACTTTTCTTGATCTGGGTAATTGTTA
TATTTGTCTATCTAGAGCTAAAGATGAAGGAAAAGCTAGGGTTTTTAGTGTGTGTTTGGT
TTCTTGTAATTGGGTCTTGTTTGGGTAGATTTGTGGTGGAAAAGAATAGCTTGAGGGTAA
CTTCTCCAGACTCGATCAAAAATGTGTATGAGTGTGCAATTGGGAATTTTGGGGTTCCAC
AATATGGAGGAACTATGGTTGGTATTGTTATGTACCCTAAAGCTAATCAGAAGTCCTGCA
AGGATTTTGCAGATTCTGATATTTCATTCAAAACTAAGGCTGGTGGTATGCCTGTTTTCG
TCCTTGTCGATAGAGGAGACTGCTATTTCACACTTAAGGCTTGGAATGCTCAAAAGGCTG
GAGCTGCTGCTATTCTTGTTGCTGATGATCGCAATGAACCTTTGATTACCATGGACACTC
CTGAGGAAGAGGATGCAAAGGCAGATTATCTGCAAAATATAACTATTCCGTCAGCTCTAA
TTAGTCAATCGCTTGGGGATAGCATCAAGAAGCAACTATCTAAAGGGGAGATGGTTAACA
TAAACCTGGATTGGAGAGAGGCTCTTCCGCATCCTGATGAAAGAGTTGAGTACGAGTTTT
GGACCAACAGTAATGATGAGTGTGGTCCTAAGTGTGAAAGCCAGAGAGAGTTTGTCAAAA
ACTTCAAAGGGGCTGCCCAGATACTTGAGCAGAAGGGGTATACACAATTCAGTCCCCATT
ACATAACTTGGTATTGTCCTGAGGCATTTATTTTGAGCAAGCAATGCAAGTCTCAGTGCA
TCAACCATGGGAGATACTGTGCTCCAGATCCTGAGCAAGACTTCAGCAAAGGTTATGATG
GGAAGGATGTTGTTTTACAAAATCTGCGCCAAGCTTGCTTTTATAAGGTTGCCAATGATA
GCGGGAAGCCCTGGTTGTGGTGGGACTACGTCACTGACTTTGGAATCCGGTGTCCAATGA
AAGAGAAGAAGTACGATAAGGAGTGTGCAGATCAAGTAATCACATCCCTTGGTTTTGATG
TAAAACAGATAGATAAATGTGTTGGAGATCCTGAAGCTGATGCTGATAACCCTATTCTAA
AGGCTGAACAAGAAGCTCAGATTGGAAAGAACTCTCGTGGAGATGTGACTATCTTGCCAA
CTCTTGTGATAAACAATAGGCAGTACAGAGGCAAGTTGGACAAGGGAGCTGTTCTGAAGG
CCATTTGTTCAGGTTTCGAGGAGACAACTGAGCCTGCAATTTGCTTAACCGATGATATAC
AAACAAATGAGTGCTTAGAGTCCAATGGTGGGTGCTGGCAGGACACAGCTGCCAACATTA
CTGCATGCCGGGATACATTCCGTGGGAAAGTCTGTGAGTGCCCGACGGTTCAGGGAGTAA
AATTTGTTGGTGATGGTTATTCTCACTGTGAAGCATCTGGAGCATTACGCTGTGGATTAA
ACAACGGAGGTTGTTGGAAGGGAACCAAGGATGGAAGGACATATTCTGCCTGCATAGATG
ACCACACAAAGGGTTGTAAATGTCCACCAGGGTTCAAAGGAGATGGAGTGAATCTTTGTG
AAGATATTGATGAATGCAAAGAAAGGCTGGCATGCCAGTGTCCAGATTGTAAATGCAAGA
ATACCTGGGGTGGTTATCAATGCAGTTGCAGCGGCAATTTATTGTACATGCAAGAACATG
ACACGTGTATAGGCAATGATGGAAAAGCAGCATTTAGCTGGGGTCTTGTTTGGGTTATCA
TCTTGGGTTTGGCAGTTGCAGGAGCTGGAGCATATGCCGTGTACAAGTATAGGATCCGGA
GATATATGGATTCAGAGATCCGTGCCATCATGGCACAGTACATGCCTTTGGATAATCAGG
GAGAGGTGCCTAACCACATATCCCACGGAAATGTCTGATAATATTCCATTGATTGCGCGG
AACGCCATCAGCTCTTTTTCCAGTTGTCACGAGGTTCTTTATGCTTGTGTAACTCTCACT
GTTCAGCGAGGTTCTTTTTATGTATATGTTTGTCATAACAGTATACACATAAACTCCCAA
TTATGATAGGGGAAATTTTCCGAAACATGCACTATCTATCTTCTTTTCACTGGAACAAAC
TGTGTCACCACTCATAACGTTTGCAGCATGAACGCCATAGATTCCGTAAATAGTAAAATT
AATTTTTATGTGCTTAACCAAACACTGATTATATGTCCAACTCATGCATTTATTGATTTG
CCGTAAATCTTATTAATAATGTATAGCTGAGAAAGAAAAGTTTTCGTATTTCTTCAAGCA
GATGAAAATGTGGTCAAGATGTCACAAGATCTGACCAACAAAGAAGCCCAAATCCATAAC
ATTACTGTCTTGTCTTCGAATACACTGTTACAAATTTATACAGAGAGTAACAAACTACAG
CAACACATGCTACTCCTAGTTTTAATGTTTATTATATGTACAACATATAATGAAGTAGAT
GCATGTCCAT