Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g074560.2.1
CDS Infomation

Nucleolar complex 4 (AHRD V3.3 *** A0A0B0NPG2_GOSAR)
Sequence

ATGGCTTCATCAATGCCATTAAAGAAGCAGAAGAAGAACAAGAATGACAAATACTCATTA
TCGGACCTCAAAACCCTAGGTCACCAGCTTCTTTCTTCAAGAGCTCATGTCAATAACCTT
CCTCTTCTCCTCTCATTCATCACCCCTTCTACTCGTCCTAAATATGCACTTGAATCTCTC
CTTTCTCTTCAATCCTTCTTCATTCCTTTACTTCCTCAACTCCCTTCTTCTACCGTATCC
TCTTCCTTCACTTCTGACTCTCAAGCTGATCCTGAGTTTATCTATCGAACATGGGTTCGT
TCCAAGTTTGACGACTTCGTTCAATCACTTCTGGATATTGTTATCTGTTCGCAATCCGAT
GAAGCACTTAGAGAAGTTGTGTTGGATACGTTGATGGAGTTTGTGAAAGTTGGAAACGGT
GGGAAGTTTCACTCTGCTATTTACTACAGGCTTCTCCATAACATTGTTCATTCCTCCCTT
GAAGTTGATGATATTTTGCTGGAGTTGCTCGCATCAAAGTATTTTAAGTACATTGATATC
AGATACTTTACTTATATCAGCCTTGAAAAGCTTTCCCGAAACATAGGAGCCAATGATATC
TCAGACGATATAAGGGAGCGACTAGACACCACCGGTGTGAATCAGCCACAATCAAGCTTG
GACCTATCAGTTCACAAGTTATCTCATCTACTATCTCGTATCCCTCCCCTGGAAGGTTCA
GATGACAAGGCAGAATATGATATGTGGAATGCTGCAGGTATATTTACTGAAAAAGAAAAT
GACAAAGGACACACTGGAAAGCAGTGCAAGGGTGAATCAACTAATATCAAGGCTTTATCT
CCAGCCAACATTGCAAAAAAGATGAAACTGAAATTTACAAAAGCCTGGATATCATTCCTT
AGACTAACACTTCCTGTTGATGTTTACAAAGAGGTTCTGGTTAACCTTCATCAAGTTGTT
ATTCCCTATCTGTCTAATCCTCTTATGTTGTGTGATTTCTTAACTCGGTCATATGATATT
GGTGGGGTGGTCAGTGTGATGGCTCTTAGCAGCTTGTTTGTTCTCATGACACAACATAGT
CTTGAGTACCCCAACTTCTATGAAAAGCTCTATGCTCTATTAGAACCTTCTATTTTTATG
GCAAAACATAGGGCAAAGTTCTTCCAGCTTCTTGATTCGTGCCTGAAATCACCACTTCTT
CCTGCATATTTGGCGGCTGCATTTTGTAAAAAACTCAGTCGGTTATCGCTCGCTGTCCCT
CCTTCAGGAGCATTAGTCATTATTGCTCTAATTCATAATCTCTTACGGAGACATCCTTCA
ATAAATTGCTTGGTGCACCAGGAGGATGGTAATGAGACTACTAAAGACATGATAGGAGCA
GAGAATGGTGCTGCTGATGATAGCACTGAAGCCTCCAGTCCCAGCAGAGAAATGTCAAGC
GTCAAGCCTAGTATTGATCCTTTTGATGACAAGCAGACTGATCCTTTGAAGGCTAACGCA
ATGAGGAGCTCTCTGTGGGAAGTTGACACACTCCGCCATCACTACTGCCCGCCTGTTTCA
AGATTTGTTTTGTCCCTTGAGAACGATTTGACAGTCAGAGCTAAAACTACTGAAGTATCA
GTCAAGGATTTCAGTTCTGGTTCATATGCAACAATTTTTGGTGATGAGATTAGGAGGCGA
GTTAAACAGGTCCCTCTTGCGTTCTACACAGCAACTCCAACTATGTTGTTTCCGGAGTCT
GATTTTATAGGTTGGACTTTCAAAATGAAGGATAAGGATAGTGCTACAATTTCTGCAAAA
CGAAGTCGAGTGGAGGAGACCTCATGA

Peptide Sequence

PEP ID

Solyc10g074560.2.1
PEP Infomation

Nucleolar complex 4 (AHRD V3.3 *** A0A0B0NPG2_GOSAR)
Sequence

MASSMPLKKQKKNKNDKYSLSDLKTLGHQLLSSRAHVNNLPLLLSFITPSTRPKYALESL
LSLQSFFIPLLPQLPSSTVSSSFTSDSQADPEFIYRTWVRSKFDDFVQSLLDIVICSQSD
EALREVVLDTLMEFVKVGNGGKFHSAIYYRLLHNIVHSSLEVDDILLELLASKYFKYIDI
RYFTYISLEKLSRNIGANDISDDIRERLDTTGVNQPQSSLDLSVHKLSHLLSRIPPLEGS
DDKAEYDMWNAAGIFTEKENDKGHTGKQCKGESTNIKALSPANIAKKMKLKFTKAWISFL
RLTLPVDVYKEVLVNLHQVVIPYLSNPLMLCDFLTRSYDIGGVVSVMALSSLFVLMTQHS
LEYPNFYEKLYALLEPSIFMAKHRAKFFQLLDSCLKSPLLPAYLAAAFCKKLSRLSLAVP
PSGALVIIALIHNLLRRHPSINCLVHQEDGNETTKDMIGAENGAADDSTEASSPSREMSS
VKPSIDPFDDKQTDPLKANAMRSSLWEVDTLRHHYCPPVSRFVLSLENDLTVRAKTTEVS
VKDFSSGSYATIFGDEIRRRVKQVPLAFYTATPTMLFPESDFIGWTFKMKDKDSATISAK
RSRVEETS*

Transcript Sequence

Transcript ID

Solyc10g074560.2.1
Transcript Infomation

Nucleolar complex 4 (AHRD V3.3 *** A0A0B0NPG2_GOSAR)
Sequence

ACCCTAAATATTAAACGTTTCTTCTGCTCTTTTCTTTTTCTCTTCTGTTTTCTCCCACAA
TTCAAAGCAGCAGCAGAAGAAGTTAACAATGGCTTCATCAATGCCATTAAAGAAGCAGAA
GAAGAACAAGAATGACAAATACTCATTATCGGACCTCAAAACCCTAGGTCACCAGCTTCT
TTCTTCAAGAGCTCATGTCAATAACCTTCCTCTTCTCCTCTCATTCATCACCCCTTCTAC
TCGTCCTAAATATGCACTTGAATCTCTCCTTTCTCTTCAATCCTTCTTCATTCCTTTACT
TCCTCAACTCCCTTCTTCTACCGTATCCTCTTCCTTCACTTCTGACTCTCAAGCTGATCC
TGAGTTTATCTATCGAACATGGGTTCGTTCCAAGTTTGACGACTTCGTTCAATCACTTCT
GGATATTGTTATCTGTTCGCAATCCGATGAAGCACTTAGAGAAGTTGTGTTGGATACGTT
GATGGAGTTTGTGAAAGTTGGAAACGGTGGGAAGTTTCACTCTGCTATTTACTACAGGCT
TCTCCATAACATTGTTCATTCCTCCCTTGAAGTTGATGATATTTTGCTGGAGTTGCTCGC
ATCAAAGTATTTTAAGTACATTGATATCAGATACTTTACTTATATCAGCCTTGAAAAGCT
TTCCCGAAACATAGGAGCCAATGATATCTCAGACGATATAAGGGAGCGACTAGACACCAC
CGGTGTGAATCAGCCACAATCAAGCTTGGACCTATCAGTTCACAAGTTATCTCATCTACT
ATCTCGTATCCCTCCCCTGGAAGGTTCAGATGACAAGGCAGAATATGATATGTGGAATGC
TGCAGGTATATTTACTGAAAAAGAAAATGACAAAGGACACACTGGAAAGCAGTGCAAGGG
TGAATCAACTAATATCAAGGCTTTATCTCCAGCCAACATTGCAAAAAAGATGAAACTGAA
ATTTACAAAAGCCTGGATATCATTCCTTAGACTAACACTTCCTGTTGATGTTTACAAAGA
GGTTCTGGTTAACCTTCATCAAGTTGTTATTCCCTATCTGTCTAATCCTCTTATGTTGTG
TGATTTCTTAACTCGGTCATATGATATTGGTGGGGTGGTCAGTGTGATGGCTCTTAGCAG
CTTGTTTGTTCTCATGACACAACATAGTCTTGAGTACCCCAACTTCTATGAAAAGCTCTA
TGCTCTATTAGAACCTTCTATTTTTATGGCAAAACATAGGGCAAAGTTCTTCCAGCTTCT
TGATTCGTGCCTGAAATCACCACTTCTTCCTGCATATTTGGCGGCTGCATTTTGTAAAAA
ACTCAGTCGGTTATCGCTCGCTGTCCCTCCTTCAGGAGCATTAGTCATTATTGCTCTAAT
TCATAATCTCTTACGGAGACATCCTTCAATAAATTGCTTGGTGCACCAGGAGGATGGTAA
TGAGACTACTAAAGACATGATAGGAGCAGAGAATGGTGCTGCTGATGATAGCACTGAAGC
CTCCAGTCCCAGCAGAGAAATGTCAAGCGTCAAGCCTAGTATTGATCCTTTTGATGACAA
GCAGACTGATCCTTTGAAGGCTAACGCAATGAGGAGCTCTCTGTGGGAAGTTGACACACT
CCGCCATCACTACTGCCCGCCTGTTTCAAGATTTGTTTTGTCCCTTGAGAACGATTTGAC
AGTCAGAGCTAAAACTACTGAAGTATCAGTCAAGGATTTCAGTTCTGGTTCATATGCAAC
AATTTTTGGTGATGAGATTAGGAGGCGAGTTAAACAGGTCCCTCTTGCGTTCTACACAGC
AACTCCAACTATGTTGTTTCCGGAGTCTGATTTTATAGGTTGGACTTTCAAAATGAAGGA
TAAGGATAGTGCTACAATTTCTGCAAAACGAAGTCGAGTGGAGGAGACCTCATGATATTA
TCGTGAACCAAATGGAAGCAATTCTTTTGATAATTTCACTAAGCTGTACTTGAATGCATG
GCTTAATTAAATGTCTTGTATTTCGTCACTGTAGACTAGTCAGGGTGAGTATAAATTTTG
GGAGAATTTAGTCATTTACTGTTTGCCCACGAGGCTCAAAAATATTACCAGAAAAAAAAA
TACCCATTTTAGAAATACTATTTATAAAAGTAATTTGGCGGGATGCATTTCTTATTGTAT
TGTCTTGTACCTTGAGGAATTTGTTTTGGGTACCTAGATGGGATAGACAATGATATCTAA
TGACTTGGGAGGTGTATTATACCACCTTTTATGTACAATATTGTTTTTTGGATTTAACTT
ATACTCATAACTAAATGCGGAATAAAATAATCGTATATTGATTGCCATTCTTTGTTCCAT
TGACCAATTAATTTGTGTGATTCAATTATTTTATCCACATCGATGGCTCGATCCAATTTT
CTTATATTTGAAAATCCACCAACCCCGCCGGGCCCCACAGATCTTACAGCTTTCTCCCCG
GTGGTCAATCACAGGTCCACAACCTTATTCTTTAGTAATTTTTGGATTATTATTTTTTGA
ATATAAAAACATGACAGAATCACATTACTAACACAAAATATACTCTAGGTGTTCATATCT
CACCTAATTGATCTTTCGAAAATATATTGAATAACTCATTCATGTGGAACTTTAAGAATA
ATTAGGGCCTTTAGTCGCCACCAAAGAATGTGGTGTAGTAGATAACGTTGATTCTTTTTT
TCTTAATCAGAAGTCTTGAATATAAATTTTAGTCGGAAGTGCTTTCTCCCGATTGGAGTA
ATCAGCTCCAATTCAAACATTAGACATGACGTAAAAAAATAAAAATAAATAAATAATGCA
ATCGTATCTCACCTTTTCATGTTTGGATGCACATTTATATGTTAAACTAATTTTAGCAAT
GTCACTTAACTGGTCATCTCATGTTAATAACGTGTTGTAAAATTAAAGCAAACAGAAAAT
ATAGATATAAAAAATAATAATAAAGAAGAGAACCTTTTTTATTCTTTCAAAATATGTTCA
AATCTTCTATGTACAACATAATTATCCGAATCTTTATTTATGAGATTACGTCAAAAAAGA
GTGTTATAAGAAACAATTTTAAACCTTAGACAATATAAATTATAACAGAAAATTATGGAT
ATCACGATAATAATATTTACAACATACTAAATCATATATAACATGTGAATTACTATATAT
ATATTTGAAAGTAATACAACAAACATATATTGTGAAGGTTATGTCATGATTAGCTTAGAG
GAAGTAGAGCCTACCAATATCTCACTTTTTAGGTTAAATCTTGTTTAGTGAATGGTTACA
TCCATTAAAGTTGTCTTTATATAGTGCAATATCCAATGAATATCCAAATTCATAAGTGGG
GTTCTTGTTGATGCTATATATGTTTGGATAAATTTGTGTCTATTTTAAGTAATTT