Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g074500.2.1
CDS Infomation

mitochondrial NAD-dependent isocitrate dehydrogenase
Sequence

ATGGCTAAGCGAACCCTACCCATCCTCAAGCACTTCCTCACCTCCTCATCTCCCTCTCCA
TCTCCATCTCATGCCTTAACATCCGTTCGATCCGTTACCTACATGCCCCGACCCGGTGAT
GGCACTCCACGCGCCGTCACACTCATCCCCGGTGACGGGATCGGACCTCTAGTAACCGGT
GCTGTTGAACAAGTCATGGAGGCGATGCACGCTCCTGTGTACTTTGAGCGTTATGATGTT
CATGGAGACATGAAGAATATGCCTCCGGATGTGATGGATTCGATCCGGAAGAATAAGGTC
TGTTTAAAAGGAGGGTTGAAGACGCCTGTGGGTGGTGGTGTTAGTTCTCTTAATGTTCAG
CTTAGGAAAGAGCTTGATCTATATGCTTCCCTTGTTCACTGCTTCAACTTGAAAGGCCTT
CCTACGCGTCATGAGAATGTTGATATTGTTGTTATTAGGGAGAATACTGAGGGCGAATAT
TCCGGATTGGAGCATGAGGTTGTTCCCGGTGTTGTAGAGAGTCTCAAGGTGATGACAAAG
TTTTGCTCAGAAAGAATTGCTAAATATGCCTTTGAATATGCATACCTCAACAATCGGAAG
GTAGTGACTGCTGTGCACAAGGCAAACATTATGAAACTTGCTGATGGTTTATTTTTGGAG
TCTTGTCGAGAGATCGCAAGCAAATACCCTGGGATCAAGTACAATGAGATAATTGTGGAC
AACTGTTGCATGCAACTTGTATCAAAGCCTGAGCAATTTGATGTTATGGTCACCCCTAAT
CTCTACGGAAATCTGGTAGCAAATACAGCAGCTGGTATTGCTGGAGGCACAGGTGTTATG
CCAGGAGGCAATGTGGGGGCTGACCATGCCGTGTTTGAGCAAGGTGCTTCAGCAGGAAAT
GTAGGAAATGAAAAGATACTAGAGCAAAAGAAGGCAAACCCAATTGCCTTGTTTCTTTCA
TCAGCCATGATGTTGAGACATCTGCAGTTCCCTTCATTTGCAGATAGACTAGAGACTTCA
GTGAAGCGTGTTATTGCCGAAGGTAAATACATGACCAAAGATCTTGGTGGAGACTGCACC
ACCCAAGAAATCACGGATGCTGTCATTGCAAATCTGGACTAA

Peptide Sequence

PEP ID

Solyc10g074500.2.1
PEP Infomation

mitochondrial NAD-dependent isocitrate dehydrogenase
Sequence

MAKRTLPILKHFLTSSSPSPSPSHALTSVRSVTYMPRPGDGTPRAVTLIPGDGIGPLVTG
AVEQVMEAMHAPVYFERYDVHGDMKNMPPDVMDSIRKNKVCLKGGLKTPVGGGVSSLNVQ
LRKELDLYASLVHCFNLKGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVMTK
FCSERIAKYAFEYAYLNNRKVVTAVHKANIMKLADGLFLESCREIASKYPGIKYNEIIVD
NCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGN
VGNEKILEQKKANPIALFLSSAMMLRHLQFPSFADRLETSVKRVIAEGKYMTKDLGGDCT
TQEITDAVIANLD*

Transcript Sequence

Transcript ID

Solyc10g074500.2.1
Transcript Infomation

mitochondrial NAD-dependent isocitrate dehydrogenase
Sequence

CCTCTCACCCTAATTTCCATGCCCCAATAGTCAAACTTCCTCTACCATTTCCGATCAATG
GCTAAGCGAACCCTACCCATCCTCAAGCACTTCCTCACCTCCTCATCTCCCTCTCCATCT
CCATCTCATGCCTTAACATCCGTTCGATCCGTTACCTACATGCCCCGACCCGGTGATGGC
ACTCCACGCGCCGTCACACTCATCCCCGGTGACGGGATCGGACCTCTAGTAACCGGTGCT
GTTGAACAAGTCATGGAGGCGATGCACGCTCCTGTGTACTTTGAGCGTTATGATGTTCAT
GGAGACATGAAGAATATGCCTCCGGATGTGATGGATTCGATCCGGAAGAATAAGGTCTGT
TTAAAAGGAGGGTTGAAGACGCCTGTGGGTGGTGGTGTTAGTTCTCTTAATGTTCAGCTT
AGGAAAGAGCTTGATCTATATGCTTCCCTTGTTCACTGCTTCAACTTGAAAGGCCTTCCT
ACGCGTCATGAGAATGTTGATATTGTTGTTATTAGGGAGAATACTGAGGGCGAATATTCC
GGATTGGAGCATGAGGTTGTTCCCGGTGTTGTAGAGAGTCTCAAGGTGATGACAAAGTTT
TGCTCAGAAAGAATTGCTAAATATGCCTTTGAATATGCATACCTCAACAATCGGAAGGTA
GTGACTGCTGTGCACAAGGCAAACATTATGAAACTTGCTGATGGTTTATTTTTGGAGTCT
TGTCGAGAGATCGCAAGCAAATACCCTGGGATCAAGTACAATGAGATAATTGTGGACAAC
TGTTGCATGCAACTTGTATCAAAGCCTGAGCAATTTGATGTTATGGTCACCCCTAATCTC
TACGGAAATCTGGTAGCAAATACAGCAGCTGGTATTGCTGGAGGCACAGGTGTTATGCCA
GGAGGCAATGTGGGGGCTGACCATGCCGTGTTTGAGCAAGGTGCTTCAGCAGGAAATGTA
GGAAATGAAAAGATACTAGAGCAAAAGAAGGCAAACCCAATTGCCTTGTTTCTTTCATCA
GCCATGATGTTGAGACATCTGCAGTTCCCTTCATTTGCAGATAGACTAGAGACTTCAGTG
AAGCGTGTTATTGCCGAAGGTAAATACATGACCAAAGATCTTGGTGGAGACTGCACCACC
CAAGAAATCACGGATGCTGTCATTGCAAATCTGGACTAATTTCTAAACCCACTCCCATAT
CTTCCTTACTCGAGATTAGTCATGCTTCAACATGTTTTTAATTTATCATCCTTTCGACGA
CTTCAATTGTTCTCTACTTCTCTTGGTGCACCATGCCTTTCAAGATGGCACACTTCACAA
AATAACGTGAATCTCCCATGTGGAAATAGTACTGTAAGAAAACAGGATTTTACAAGCTTA
TAGCCATTTATTTCCTATAGAATGTCTTTTTTTGTAATGAAGGTGAATAAATTTGATTCC
AACTTTTGTGCTTGAGGCAGACTTCCTCACAAACACTTTGTATCGCTTGTTTGCCAAAAA
AATGTCAAATGGTTCATTTGTTTGCTCCCTTTCCCGGCAAGCTAGAAGGACCGTCTTACT
TAGCTATTAT