Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g054840.2.1
CDS Infomation

X-intrinsic protein 1.1
Sequence

ATGGCTTCTAATAGTAATGTTGTTTTTGGTGATGAGGAAAGCCAGATTTCTGGTGGGACT
AATAGAGTTCAACCTTGTTCTTCTACACCAAGAAAGATTAATACTATTGATGATGATGAG
GGAAAGAAGCACAATTTTCTTTCACTCTCTCAAAGGCTGGGCGTTGCTGACTTTTTTTGT
TTGGATGTATGGCGAGCATCGATGGGAGAACTCCTAGGTTCAGCGGTTCTTGTTTTCATG
TTGGATACTATAGTAATTTCCACTTTCGAAAGTGAGACGAAAATGCCAAATTTGATCATG
TCCATTCTCATAGCAGTTGTGATCACAATTCTACTCCTGGCTGTTGTTCCGGTGTCCGGA
GGCCATATCAATCCGGTTATCTCTTTCTCGGCCGCGCTCGTCGGAATTATATCGATGTCA
AGAGCCATAATTTACATTGTGGCACAATGTGTTGGTGCAATTTTAGGTGCACTAGCTCTC
AGAGCTGTGGTTAGTTCATCGATTGAAGACACTTTCTCACTCGGTGGTTGTACCGTCACA
ATAATTGCACCGGGCCCAAATGGGCCTGTTATTGTGGGCCTAGAGACGGCCCAAGCCTTA
TGGCTAGAGATCTTTTGTACATTTGTTTTTCTCTTTGCTTCAATTTGGATGGCTTATGAT
CATAGACAAGCTAAGGCTCTTGGCCATGTAACTGTCTTGTCCATTGTTGGTCTAGTGTTA
GGCCTTCTAGTGTTTATCTCGACCACGGTGACCGCAAAAAAGGGCTACGGAGGGGCTGGG
ATTAACCCGGCGAGATGTTTGGGGCCAGCTATTATTAGAGGAGGTCACCTTTGGGATGGA
CATTGGATCTTTTGGGTTGGACCAACTATTGGTTGTGTAGCCTTCTATGTGTACACAAAA
ATCATTCCAACAAAGCATTTTCTTGCAGAATATGGATTTAAGCATGATTTTGTTGGAGTT
GTTAAGGCTTTGTCGAATGTATAA

Peptide Sequence

PEP ID

Solyc10g054840.2.1
PEP Infomation

X-intrinsic protein 1.1
Sequence

MASNSNVVFGDEESQISGGTNRVQPCSSTPRKINTIDDDEGKKHNFLSLSQRLGVADFFC
LDVWRASMGELLGSAVLVFMLDTIVISTFESETKMPNLIMSILIAVVITILLLAVVPVSG
GHINPVISFSAALVGIISMSRAIIYIVAQCVGAILGALALRAVVSSSIEDTFSLGGCTVT
IIAPGPNGPVIVGLETAQALWLEIFCTFVFLFASIWMAYDHRQAKALGHVTVLSIVGLVL
GLLVFISTTVTAKKGYGGAGINPARCLGPAIIRGGHLWDGHWIFWVGPTIGCVAFYVYTK
IIPTKHFLAEYGFKHDFVGVVKALSNV*

Transcript Sequence

Transcript ID

Solyc10g054840.2.1
Transcript Infomation

X-intrinsic protein 1.1
Sequence

ATATCTTTACATTCTTAGAATTGATAGTCGTAGATAAATAATAAAGAGGATGAAAAAGTA
GAGCTTACTATTCTAAAATTATATTGTAATCACAAAAAGGGCCTACAATTTTAATAAGGA
TCTGTCACATCCTTGCATGTAGCAGTGGAAGAACCATATTATATAACAAAAATAATAAAT
AAAAAGAATTGACTCCTCCAATAAAATTGGCCTAGAGAGATCTCTTTTGGTTGATATATA
TATACGTAAACAGAACTTTCTTATAATAAATAATACTAATAATAACAAAAGAAAGATAGG
TTAGGCAGTGGAGGTTGGAGAGTAGTATTTATAACCCCATATTCATGCACACAATTTCAG
GGAAAATGCATTAAAACCTTAAGCTAAATACTAGGATCAATTTTCTTAGTTTTCTCCCAC
ATATGGCTTCTAATAGTAATGTTGTTTTTGGTGATGAGGAAAGCCAGATTTCTGGTGGGA
CTAATAGAGTTCAACCTTGTTCTTCTACACCAAGAAAGATTAATACTATTGATGATGATG
AGGGAAAGAAGCACAATTTTCTTTCACTCTCTCAAAGGCTGGGCGTTGCTGACTTTTTTT
GTTTGGATGTATGGCGAGCATCGATGGGAGAACTCCTAGGTTCAGCGGTTCTTGTTTTCA
TGTTGGATACTATAGTAATTTCCACTTTCGAAAGTGAGACGAAAATGCCAAATTTGATCA
TGTCCATTCTCATAGCAGTTGTGATCACAATTCTACTCCTGGCTGTTGTTCCGGTGTCCG
GAGGCCATATCAATCCGGTTATCTCTTTCTCGGCCGCGCTCGTCGGAATTATATCGATGT
CAAGAGCCATAATTTACATTGTGGCACAATGTGTTGGTGCAATTTTAGGTGCACTAGCTC
TCAGAGCTGTGGTTAGTTCATCGATTGAAGACACTTTCTCACTCGGTGGTTGTACCGTCA
CAATAATTGCACCGGGCCCAAATGGGCCTGTTATTGTGGGCCTAGAGACGGCCCAAGCCT
TATGGCTAGAGATCTTTTGTACATTTGTTTTTCTCTTTGCTTCAATTTGGATGGCTTATG
ATCATAGACAAGCTAAGGCTCTTGGCCATGTAACTGTCTTGTCCATTGTTGGTCTAGTGT
TAGGCCTTCTAGTGTTTATCTCGACCACGGTGACCGCAAAAAAGGGCTACGGAGGGGCTG
GGATTAACCCGGCGAGATGTTTGGGGCCAGCTATTATTAGAGGAGGTCACCTTTGGGATG
GACATTGGATCTTTTGGGTTGGACCAACTATTGGTTGTGTAGCCTTCTATGTGTACACAA
AAATCATTCCAACAAAGCATTTTCTTGCAGAATATGGATTTAAGCATGATTTTGTTGGAG
TTGTTAAGGCTTTGTCGAATGTATAAAGGCCCAAATGTAACAATGGGCCTATGGGCCAAT
GTTAAACTAATGTGTAATAGGACTTGAGTACTAGTTACATAGAACATATCATATTGTCCC
TACCTAGTACCTCTACTTGATGTAATTTAAGCTTAAACTTGTCAATGTTTCAACATGTTT
GTCTCTTTTCCAATTGTAGAAACTAATACTATTAGTTAATGAAGAAATCAAATTAAGTAT
CATGTGTCATTTACATGTCCAAAATTTTGTAAAACAAACTCTCGAGGTTAATAATATGAT
CATGAGAATTTTGTTCATCAAAATTA