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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g054800.2.1
CDS Infomation

X-intrinsic protein 1.4
Sequence

ATGGGTTCCAATAATAACGCTGTTTTTGGTGATGAAGAAAATCAGTTTTCTTGTGGAACT
AATAAAGTTCAACCTTGCTCTTCTACACCAAAAAGGAGTACTATTGATGATGAGGGAAAG
AAGTTAAATTTTCTCTCGTTCTCTGAAAGGCTGGGCGTTTCTGACTTCTTTTCTTTGGAT
GTATGGAGAGCGTCAATTGGAGAACTCTTAGGCACAGCGGTTCTTGTTTTCATGTTGGAT
ACAATAGTAATCTCTACCTTAGAAAGTGACATTAAAATGCCAAATTTGATTTTGTCAATT
CTCGCAGCAGTCATAATCACAATCCTACTCTTGGCGGTTGTTCCAGTGTCTGGAGGCCAC
ATCAATCCTGTTATTTCCTTCTCAGCCGCGCTCGTCGGAATTATATCCATGTCAAGAGCC
ATCATTTACATAATGGCACAATGTCTTGGTGCAATTTTAGGTGCACTAGCTCTCAAAGCA
GTTGTTAGTTCATCAATTGAAGACACTTTCTCACTTGGTGGATGCACTATCACAATAATT
GCACCAGGCCCAAATGGGCCCATTAGTGTGGGCCTAGAGACGGCCCAAGCATTATGGCTA
GAGATATTTTGTACATTTGTTTTTCTCTTTGCTTCAATTTGGATGGCTTATGATCATAGA
CAAGCTAAGGCTCTTGGCCATGTAACTGTCTTGTCGATTGTTGGTGTAGTGTTAGGTCTT
CTAGTGTTTATCTCGACCACGGTCACCGCCAAAAAGGGCTACGCTGGGGCAGGGATGAAC
CCAGCTAGGTGTTTCGGGCCCGCTATCGTTAGAGGAGGTCACCTTTGGGATGGACATTGG
ATCTTTTGGGTTGGGCCTATTATTGGTTGTGTAGCCTTCTATGTATACACAAAAATCATT
CCAACAAAGCATTTCAATGCAGAATATGGATACAAGCATGATTTTGTTGGAGTTGTTAAG
GCTTTGGTTGGATCGAATGTATAA

Peptide Sequence

PEP ID

Solyc10g054800.2.1
PEP Infomation

X-intrinsic protein 1.4
Sequence

MGSNNNAVFGDEENQFSCGTNKVQPCSSTPKRSTIDDEGKKLNFLSFSERLGVSDFFSLD
VWRASIGELLGTAVLVFMLDTIVISTLESDIKMPNLILSILAAVIITILLLAVVPVSGGH
INPVISFSAALVGIISMSRAIIYIMAQCLGAILGALALKAVVSSSIEDTFSLGGCTITII
APGPNGPISVGLETAQALWLEIFCTFVFLFASIWMAYDHRQAKALGHVTVLSIVGVVLGL
LVFISTTVTAKKGYAGAGMNPARCFGPAIVRGGHLWDGHWIFWVGPIIGCVAFYVYTKII
PTKHFNAEYGYKHDFVGVVKALVGSNV*

Transcript Sequence

Transcript ID

Solyc10g054800.2.1
Transcript Infomation

X-intrinsic protein 1.4
Sequence

CTTTGTTTTTCTCCCAAAATATGGGTTCCAATAATAACGCTGTTTTTGGTGATGAAGAAA
ATCAGTTTTCTTGTGGAACTAATAAAGTTCAACCTTGCTCTTCTACACCAAAAAGGAGTA
CTATTGATGATGAGGGAAAGAAGTTAAATTTTCTCTCGTTCTCTGAAAGGCTGGGCGTTT
CTGACTTCTTTTCTTTGGATGTATGGAGAGCGTCAATTGGAGAACTCTTAGGCACAGCGG
TTCTTGTTTTCATGTTGGATACAATAGTAATCTCTACCTTAGAAAGTGACATTAAAATGC
CAAATTTGATTTTGTCAATTCTCGCAGCAGTCATAATCACAATCCTACTCTTGGCGGTTG
TTCCAGTGTCTGGAGGCCACATCAATCCTGTTATTTCCTTCTCAGCCGCGCTCGTCGGAA
TTATATCCATGTCAAGAGCCATCATTTACATAATGGCACAATGTCTTGGTGCAATTTTAG
GTGCACTAGCTCTCAAAGCAGTTGTTAGTTCATCAATTGAAGACACTTTCTCACTTGGTG
GATGCACTATCACAATAATTGCACCAGGCCCAAATGGGCCCATTAGTGTGGGCCTAGAGA
CGGCCCAAGCATTATGGCTAGAGATATTTTGTACATTTGTTTTTCTCTTTGCTTCAATTT
GGATGGCTTATGATCATAGACAAGCTAAGGCTCTTGGCCATGTAACTGTCTTGTCGATTG
TTGGTGTAGTGTTAGGTCTTCTAGTGTTTATCTCGACCACGGTCACCGCCAAAAAGGGCT
ACGCTGGGGCAGGGATGAACCCAGCTAGGTGTTTCGGGCCCGCTATCGTTAGAGGAGGTC
ACCTTTGGGATGGACATTGGATCTTTTGGGTTGGGCCTATTATTGGTTGTGTAGCCTTCT
ATGTATACACAAAAATCATTCCAACAAAGCATTTCAATGCAGAATATGGATACAAGCATG
ATTTTGTTGGAGTTGTTAAGGCTTTGGTTGGATCGAATGTATAAAGGCCCAAATGCAATA
ATGGGCCTATGG