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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g054070.1.1
CDS Infomation

Lateral root primordium protein-related (AHRD V3.3 *** A0A061E6J8_THECC),Pfam:PF05142
Sequence

ATGATGATGAGAGAAGATGAAGGAATTGTTATATCATCATCAAATAACAAAAGATGTGAA
GACTGTGGAAACCAAGCTAAAAAAGATTGTTTGTATTTTAGATGCAGAACTTGTTGTAAA
ACTAGAGGGTATCAATGTCAAACTCATGTTAAAAGCACTTGGATACCCATCTCTACCAGG
CGTTCAAGACATCATCATCCCAGCTCAACTGTTCAACAACCAAACCCTAAAAGACACAGA
CCAAATCACGCGCTATTACAAACAGGTGGTGAAGAGGAAAAAGAAGAACTTCCATCAGAA
GTGAGTTTACCGGCAATTTTTCGTTGTGTTAGAGTGAGTTCAGTAGACAATATGGTCGAT
CAATATGCCTATCAGACATCAGTAAACATAGCAGGACATGTTTTTAAAGGGATATTATAT
GATCAAGGCAACAATATGCCTAACCAAACTTCCTCAAGAGGCTTTCACCAACAACAACTT
ACAAATTTCACACCACCAATATCTACTACTTACCCTACTTTCATGCCTGGTATGCAATTA
TTCCAATACCCAAAATCATCCTAA

Peptide Sequence

PEP ID

Solyc10g054070.1.1
PEP Infomation

Lateral root primordium protein-related (AHRD V3.3 *** A0A061E6J8_THECC),Pfam:PF05142
Sequence

MMMREDEGIVISSSNNKRCEDCGNQAKKDCLYFRCRTCCKTRGYQCQTHVKSTWIPISTR
RSRHHHPSSTVQQPNPKRHRPNHALLQTGGEEEKEELPSEVSLPAIFRCVRVSSVDNMVD
QYAYQTSVNIAGHVFKGILYDQGNNMPNQTSSRGFHQQQLTNFTPPISTTYPTFMPGMQL
FQYPKSS*

Transcript Sequence

Transcript ID

Solyc10g054070.1.1
Transcript Infomation

Lateral root primordium protein-related (AHRD V3.3 *** A0A061E6J8_THECC),Pfam:PF05142
Sequence

ATGATGATGAGAGAAGATGAAGGAATTGTTATATCATCATCAAATAACAAAAGATGTGAA
GACTGTGGAAACCAAGCTAAAAAAGATTGTTTGTATTTTAGATGCAGAACTTGTTGTAAA
ACTAGAGGGTATCAATGTCAAACTCATGTTAAAAGCACTTGGATACCCATCTCTACCAGG
CGTTCAAGACATCATCATCCCAGCTCAACTGTTCAACAACCAAACCCTAAAAGACACAGA
CCAAATCACGCGCTATTACAAACAGGTGGTGAAGAGGAAAAAGAAGAACTTCCATCAGAA
GTGAGTTTACCGGCAATTTTTCGTTGTGTTAGAGTGAGTTCAGTAGACAATATGGTCGAT
CAATATGCCTATCAGACATCAGTAAACATAGCAGGACATGTTTTTAAAGGGATATTATAT
GATCAAGGCAACAATATGCCTAACCAAACTTCCTCAAGAGGCTTTCACCAACAACAACTT
ACAAATTTCACACCACCAATATCTACTACTTACCCTACTTTCATGCCTGGTATGCAATTA
TTCCAATACCCAAAATCATCCTAA