Plant GARDEN
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g054030.2.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT4G39140.5)
Sequence

ATGGGTTCCGCTTGCTGTGTTGCTGCCAGAGATAGAGCTGTTCTAGATGGATCAAGCTGT
GAAAATTTTCAGAGAAATGTCCGCCAGTCTCCTACGTGGAGCTTTCGGTGGGATAATCGG
GGACGAGTGGCTGGGGAGGAGACGCCAGTAAATTGGTCTTCTGATGGAATTGGTGGCAAT
GATGGAATAGAATTTAAATCTGGAACTGTAGGAACAGTCTATGCATCTGAAGAGGGTAGT
CCATTGGATAGTTTCAGATCACTTGCATGGCAGAAGTCACCAGTTTCTGAAAGAAATAAT
CGAAACTTTTCACTTCCTTTATTGGATCCCTTGGCTGAGAGGAATTCGACCGAGGTTAAA
GACTTCGCTGGTTCAACAGCACTTTCATTCCGCTCTCCTATAAAGCTATCTCCATCCGCT
CCCTCAGTTTCATCTTTATCTGCATCTCCTTTATCATCACGTGGCCAGCTGCCTCCTGCT
AGCTTTACTCCATGTTTGCCTCACCATTCTTCAGCGCACCAACTTGGACAGCAAGTTTCT
GATGGCCGTGTACCAGGGCTGAAGTCACCTACATTTTCAATTTCCGAAGAATCATCTTCC
TTTGTGCTCCTCCCTGGTTGGAGTAATGATTCAACTAGGGGCTCTCATGGTGGATCATCA
GATGGTTGGTCAGCTCCTGGCTTTGCTGACCTGGCAAATCCTCGTCGAGATAGGTGGTCA
TTTGATAGTGAATCCTTTGGTTTCCATCGTGAAAGGGCCACTAGCCGAGGTTCTGGGTCA
TCTTCATTCGATCTCCAAACGTGTGGCATATGTGCAAAGCTATTGAATGAACTTGCTGTT
GCTGTTCTAGTTTGCGGCCATGTTTTCCATGCTGAGTGCTTGGAGAATATGACATCTGAA
ATCAATAGGTATGACCCAGCTTGCCCTGTGTGTACTTTTGGGGAGAAGCAGGCCTTGAAG
ATATATGAAAAGGCAAAAGCTAAGATAGAATTGAAAGCTAGAAAGAGACTTCGAAACAGG
ATTGTTGACAGTGATATTAGTGGGAATGTTGATCTGTTAGAGCGTCAGAAAAGTAGTGCT
CATGAAGGAGGGTGTCCCAGGATGAGCTCCAGTTCCAGTATGAAGAGCCCTTCAAAGAGG
CCCTTCCTACGACATTATTTCTCCTTCGGTTCAAAGGGATCAAGATCCTACTCCGAGGGT
CCTTCAACTCGGAGGAGAGGGTTCTCCTGGACAAGATCTAACAAGAAGTAG

Peptide Sequence

PEP ID

Solyc10g054030.2.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT4G39140.5)
Sequence

MGSACCVAARDRAVLDGSSCENFQRNVRQSPTWSFRWDNRGRVAGEETPVNWSSDGIGGN
DGIEFKSGTVGTVYASEEGSPLDSFRSLAWQKSPVSERNNRNFSLPLLDPLAERNSTEVK
DFAGSTALSFRSPIKLSPSAPSVSSLSASPLSSRGQLPPASFTPCLPHHSSAHQLGQQVS
DGRVPGLKSPTFSISEESSSFVLLPGWSNDSTRGSHGGSSDGWSAPGFADLANPRRDRWS
FDSESFGFHRERATSRGSGSSSFDLQTCGICAKLLNELAVAVLVCGHVFHAECLENMTSE
INRYDPACPVCTFGEKQALKIYEKAKAKIELKARKRLRNRIVDSDISGNVDLLERQKSSA
HEGGCPRMSSSSSMKSPSKRPFLRHYFSFGSKGSRSYSEGPSTRRRGFSWTRSNKK*

Transcript Sequence

Transcript ID

Solyc10g054030.2.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT4G39140.5)
Sequence

AAATTCTTAGGTTTATTTTGTAACCCCCAAACGGAAAACGCAATAAGCATTTGCATATCG
CCGTCTAAAACGACCTGACTTCTCTCTCTCTCTCTATACATATATAGTCCCCCCATCCCC
CTCTCTCTTCACTAATCGCTTGATTTCTCTGCTATACCGTCGCCGGCCGGCGAATTTCAC
GAGAATTTAACTCCCGTATTTGAAGATGATGTAGCATGCTGGCATTGTCATTGGTCTGAC
TGATAGCTGCCTAAGTATTGTATGCTTTGTGTGTAAGCAAGCATGGGTTCCGCTTGCTGT
GTTGCTGCCAGAGATAGAGCTGTTCTAGATGGATCAAGCTGTGAAAATTTTCAGAGAAAT
GTCCGCCAGTCTCCTACGTGGAGCTTTCGGTGGGATAATCGGGGACGAGTGGCTGGGGAG
GAGACGCCAGTAAATTGGTCTTCTGATGGAATTGGTGGCAATGATGGAATAGAATTTAAA
TCTGGAACTGTAGGAACAGTCTATGCATCTGAAGAGGGTAGTCCATTGGATAGTTTCAGA
TCACTTGCATGGCAGAAGTCACCAGTTTCTGAAAGAAATAATCGAAACTTTTCACTTCCT
TTATTGGATCCCTTGGCTGAGAGGAATTCGACCGAGGTTAAAGACTTCGCTGGTTCAACA
GCACTTTCATTCCGCTCTCCTATAAAGCTATCTCCATCCGCTCCCTCAGTTTCATCTTTA
TCTGCATCTCCTTTATCATCACGTGGCCAGCTGCCTCCTGCTAGCTTTACTCCATGTTTG
CCTCACCATTCTTCAGCGCACCAACTTGGACAGCAAGTTTCTGATGGCCGTGTACCAGGG
CTGAAGTCACCTACATTTTCAATTTCCGAAGAATCATCTTCCTTTGTGCTCCTCCCTGGT
TGGAGTAATGATTCAACTAGGGGCTCTCATGGTGGATCATCAGATGGTTGGTCAGCTCCT
GGCTTTGCTGACCTGGCAAATCCTCGTCGAGATAGGTGGTCATTTGATAGTGAATCCTTT
GGTTTCCATCGTGAAAGGGCCACTAGCCGAGGTTCTGGGTCATCTTCATTCGATCTCCAA
ACGTGTGGCATATGTGCAAAGCTATTGAATGAACTTGCTGTTGCTGTTCTAGTTTGCGGC
CATGTTTTCCATGCTGAGTGCTTGGAGAATATGACATCTGAAATCAATAGGTATGACCCA
GCTTGCCCTGTGTGTACTTTTGGGGAGAAGCAGGCCTTGAAGATATATGAAAAGGCAAAA
GCTAAGATAGAATTGAAAGCTAGAAAGAGACTTCGAAACAGGATTGTTGACAGTGATATT
AGTGGGAATGTTGATCTGTTAGAGCGTCAGAAAAGTAGTGCTCATGAAGGAGGGTGTCCC
AGGATGAGCTCCAGTTCCAGTATGAAGAGCCCTTCAAAGAGGCCCTTCCTACGACATTAT
TTCTCCTTCGGTTCAAAGGGATCAAGATCCTACTCCGAGGGTCCTTCAACTCGGAGGAGA
GGGTTCTCCTGGACAAGATCTAACAAGAAGTAGGTTTCTATATGGACATAAAAGATAACC
ATGGGTATGCTCTCTGAGCTGCCTTATTGGGTTGTAGAGTGGTGAAAGCAGTCAATGATC
TTGATGGTGAAAATGCAATGCATTTGCAGGCAAGTAATACATTGTAAAAAATGGGAAGAA
TACAAGGTGGATGATTAATTTGTTTAAATAGGAAAGAAGATGCAAATTGAATTGAAAATA
GTTGTTGTTTCAGTGTATGTTCTATTGGGTTACATACATGTCAAGCCCATGAAAAAATTG
TCCTGAAGATTTTATATATATGGTTAAAAGTGCTCATCTCTATTACCTACCTATATAGTA
GCATATATTTGGTGTTCTACTCATGCTTAAGAGTAGCATCAGCCATTGTATGACTTTGTA
TTCTTTTTGTATTTATTTGAGTCAGTTAGAGCTCCGTACCAGCAACCGTGACCCCTTAAT
TATTGCTCTAACTTATATATACATGGTA