Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g053970.2.1
CDS Infomation

Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** AT2G21520.1)
Sequence

ATGTCAGGTCCATTAGATCGATTTGCGATGCCTTGCTTTGAGGGGTCGTCCACACACGAT
GAGAGAAGAGAAAGAAAATCTGATTTCGAGAACTCAGAGGATGAGAGGAGGACAAGAATT
GGCACGCTGAAAAAGAAAGCAATAAATGCATCAACAAAATTTAAACATTCTCTTAAGAAG
AAAGGCAGAAGAAAAAGTGATGGACGAGTGAGTTCAGTTTCAATTGAGGATATTCGTGAT
GCTGAGGAGCTGCAAGCTGTTGACCAATTTAGGCAAGCACTGATTTTGGATGATTTATTA
CCTGGGAGACATGATGACTACTATATGATGCTAAGATTTCTGAAGGCAAGGAAGTTTGAT
ATTGATAAAGCAAAGCATATGTGGGCTGATATGCTTCAGTGGAGGAAGGAATTTGGTGCG
GACACCATTATCCATGATTTTCAATTCCAAGAGCAGGATGAAGTTTCGAAATACTACCCC
CAAGGTTATCATGGGATTGATAGGGAAGGAAGACCGGTATACATTGAAAGGTTAGGGAAA
GTTGATCCCACAAAACTTATGCAAGTCACAACTATGGACCGTTACATCAGAAACCATGTA
AGAGAGTTTGAGAAAACTTTTGCAATCAAGTTTCCAGCATGTACAGTTGCTGCAAAAAGG
CAGATTGATTCAAGCACTACTATTTTGGATGTCCAGGGAGTGGGTTTGAAAAACTTTACA
AAGAGTGCTAGGGAGCTCATCATGCGACTTCAGAAGATTGATGGTGATAATTATCCCGAG
ACACTTCATCAAATGCTTATCATCAATGCTGGACCTGGCTTTAGGCTGCTGTGGAGTACT
GTTAAGAGTTTTTTGGATCCCAAGACCACCTCGAAGATACATGTTCTTGGGTACAAGTAC
CAAACCAAATTGCTTGAACTAGTGGACGTTAGTGAGTTGCCAGATTTTTTGGGTGGAAAC
TGTACATGTGCAGATCAAGGAGGTTGCCTTCGCTCAGATAAAGGGCCATGGCAAAATCCG
GAAATATTAAAGATGATTGGTGAAGCACGGCGTGCCAGGCAGGTTGTTAAAGTTGTAAAC
AGCGAAGGAAAGGTAGTTTATGCTAAGCCTCGCTTCCCCATGCAGTCAAAAGGTAGTGAT
ACCTCCACGGCAGAATCGGGATCTGAGGCAGAAGATATTGGTTCCCCTAAAGCTGTAAGG
AATTATTCGCATCTTCGGCTTACTCCTGTCCGTGAAGAGGCTAAGGGTATAGGAATGTCT
GGCTACACTGCAAACTTATCAGGATATGATGAATATGTTCCCATGGTTGACAAGGCGGTT
GATTCTGTGTTAAAGAAGCAAACATCCTTTCATAAAGCCCCCATTGCCAAAGGGATACTT
CCACCAGCAGATTCTCAAAAGCCTGCAGGTGGTCTTAATGCTCAGATATTAGGATTTCTT
ATGGCTTTCTTCACGACTGTGGTGATGCTTTTCCGTTCACTGCTATGCTGCATAACTAAG
AAATTTCCAGATCCATCAATTGGTCAAGACCAAGCTGTTCAAGAATTCACTTTTGATGCC
AACAGTAATGAGGAGCTTCGGCCACCTTCACCAACTCCAGCCTTTAGTGAAGCTCAATTG
CTTTCTGTTGTTCTGAAAAAATTGGGTGAACTTGAGGACAAAGTAAGTACGCTTCAAGAA
AAGCCATCTGAGATGCCTTATGAGAAAGAGGAACTGCTAAATGCTGCTGTTTGCCGTGTG
GATGCCCTGGAAGCTGAGTTAATTGCAACCAAGAAGGCTTTGCACGAGGCTTTGATGAGA
CAAGAGGAACTTCTTGCATACATTGATGGTCAGGAAGCTGCAAAATTTCAGAAAAAGAAG
TTTTGCTTTTAA

Peptide Sequence

PEP ID

Solyc10g053970.2.1
PEP Infomation

Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** AT2G21520.1)
Sequence

MSGPLDRFAMPCFEGSSTHDERRERKSDFENSEDERRTRIGTLKKKAINASTKFKHSLKK
KGRRKSDGRVSSVSIEDIRDAEELQAVDQFRQALILDDLLPGRHDDYYMMLRFLKARKFD
IDKAKHMWADMLQWRKEFGADTIIHDFQFQEQDEVSKYYPQGYHGIDREGRPVYIERLGK
VDPTKLMQVTTMDRYIRNHVREFEKTFAIKFPACTVAAKRQIDSSTTILDVQGVGLKNFT
KSARELIMRLQKIDGDNYPETLHQMLIINAGPGFRLLWSTVKSFLDPKTTSKIHVLGYKY
QTKLLELVDVSELPDFLGGNCTCADQGGCLRSDKGPWQNPEILKMIGEARRARQVVKVVN
SEGKVVYAKPRFPMQSKGSDTSTAESGSEAEDIGSPKAVRNYSHLRLTPVREEAKGIGMS
GYTANLSGYDEYVPMVDKAVDSVLKKQTSFHKAPIAKGILPPADSQKPAGGLNAQILGFL
MAFFTTVVMLFRSLLCCITKKFPDPSIGQDQAVQEFTFDANSNEELRPPSPTPAFSEAQL
LSVVLKKLGELEDKVSTLQEKPSEMPYEKEELLNAAVCRVDALEAELIATKKALHEALMR
QEELLAYIDGQEAAKFQKKKFCF*

Transcript Sequence

Transcript ID

Solyc10g053970.2.1
Transcript Infomation

Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** AT2G21520.1)
Sequence

ATACTCAATATAGGTGCCTTCAGCTTTTGATTCTTCTCAGTTTTCTTCTTCCACCTACTG
AATATTCATCTTTTGCCAGAGTTTTACAGTGATTCTTCGATCTGCTGAGTTTACTAGTGA
ATTTTCTGTTCTCGGATCTACTGATCGTCGAGATTTTTGGGTTCGGGTAATCGCCGGCGG
CTATGTCAGGTCCATTAGATCGATTTGCGATGCCTTGCTTTGAGGGGTCGTCCACACACG
ATGAGAGAAGAGAAAGAAAATCTGATTTCGAGAACTCAGAGGATGAGAGGAGGACAAGAA
TTGGCACGCTGAAAAAGAAAGCAATAAATGCATCAACAAAATTTAAACATTCTCTTAAGA
AGAAAGGCAGAAGAAAAAGTGATGGACGAGTGAGTTCAGTTTCAATTGAGGATATTCGTG
ATGCTGAGGAGCTGCAAGCTGTTGACCAATTTAGGCAAGCACTGATTTTGGATGATTTAT
TACCTGGGAGACATGATGACTACTATATGATGCTAAGATTTCTGAAGGCAAGGAAGTTTG
ATATTGATAAAGCAAAGCATATGTGGGCTGATATGCTTCAGTGGAGGAAGGAATTTGGTG
CGGACACCATTATCCATGATTTTCAATTCCAAGAGCAGGATGAAGTTTCGAAATACTACC
CCCAAGGTTATCATGGGATTGATAGGGAAGGAAGACCGGTATACATTGAAAGGTTAGGGA
AAGTTGATCCCACAAAACTTATGCAAGTCACAACTATGGACCGTTACATCAGAAACCATG
TAAGAGAGTTTGAGAAAACTTTTGCAATCAAGTTTCCAGCATGTACAGTTGCTGCAAAAA
GGCAGATTGATTCAAGCACTACTATTTTGGATGTCCAGGGAGTGGGTTTGAAAAACTTTA
CAAAGAGTGCTAGGGAGCTCATCATGCGACTTCAGAAGATTGATGGTGATAATTATCCCG
AGACACTTCATCAAATGCTTATCATCAATGCTGGACCTGGCTTTAGGCTGCTGTGGAGTA
CTGTTAAGAGTTTTTTGGATCCCAAGACCACCTCGAAGATACATGTTCTTGGGTACAAGT
ACCAAACCAAATTGCTTGAACTAGTGGACGTTAGTGAGTTGCCAGATTTTTTGGGTGGAA
ACTGTACATGTGCAGATCAAGGAGGTTGCCTTCGCTCAGATAAAGGGCCATGGCAAAATC
CGGAAATATTAAAGATGATTGGTGAAGCACGGCGTGCCAGGCAGGTTGTTAAAGTTGTAA
ACAGCGAAGGAAAGGTAGTTTATGCTAAGCCTCGCTTCCCCATGCAGTCAAAAGGTAGTG
ATACCTCCACGGCAGAATCGGGATCTGAGGCAGAAGATATTGGTTCCCCTAAAGCTGTAA
GGAATTATTCGCATCTTCGGCTTACTCCTGTCCGTGAAGAGGCTAAGGGTATAGGAATGT
CTGGCTACACTGCAAACTTATCAGGATATGATGAATATGTTCCCATGGTTGACAAGGCGG
TTGATTCTGTGTTAAAGAAGCAAACATCCTTTCATAAAGCCCCCATTGCCAAAGGGATAC
TTCCACCAGCAGATTCTCAAAAGCCTGCAGGTGGTCTTAATGCTCAGATATTAGGATTTC
TTATGGCTTTCTTCACGACTGTGGTGATGCTTTTCCGTTCACTGCTATGCTGCATAACTA
AGAAATTTCCAGATCCATCAATTGGTCAAGACCAAGCTGTTCAAGAATTCACTTTTGATG
CCAACAGTAATGAGGAGCTTCGGCCACCTTCACCAACTCCAGCCTTTAGTGAAGCTCAAT
TGCTTTCTGTTGTTCTGAAAAAATTGGGTGAACTTGAGGACAAAGTAAGTACGCTTCAAG
AAAAGCCATCTGAGATGCCTTATGAGAAAGAGGAACTGCTAAATGCTGCTGTTTGCCGTG
TGGATGCCCTGGAAGCTGAGTTAATTGCAACCAAGAAGGCTTTGCACGAGGCTTTGATGA
GACAAGAGGAACTTCTTGCATACATTGATGGTCAGGAAGCTGCAAAATTTCAGAAAAAGA
AGTTTTGCTTTTAAGGATCCCTTGGAAAGTGGAGCTCCGACTTTTAACAAAAGTATCCGA
ATGTGATGAGAACATACTTGTAATATGAACGAGCAGGCATGGATCCTAATCATTGTGCAG
TGGATTTGATCGTATAATGCACCTTTTTTATCTTCTGAAAATTTTGCTTTTGGCACTATG
AATTTTACCATCTTTCGTGTTGGTTGAAATGGCCAGACCTACTAGGAGTTGTACCAACCT
TTTGTCCCCAAAGTGGCAGAACATTTGCTAATTGTGTTTAAGGATTAGAGTGACACATGA
GATGAATGTTAATGCGAAATTTATTTAGT